Malaciobacter marinus: AMRN_0064
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Entry
AMRN_0064 CDS
T06187
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
amar
Malaciobacter marinus
Pathway
amar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMRN_0064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amar03019
]
AMRN_0064
03009 Ribosome biogenesis [BR:
amar03009
]
AMRN_0064
Messenger RNA biogenesis [BR:
amar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMRN_0064
Ribosome biogenesis [BR:
amar03009
]
Prokaryotic type
rRNA helicases
AMRN_0064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AXX85864
UniProt:
A0A347TGY6
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All DBs
Position
complement(64881..66338)
Genome browser
AA seq
485 aa
AA seq
DB search
MTFQEFNFKTNLQKSIDDAGFKEPSPIQKDAIPVILEGKDIVGQAHTGTGKTAAFGLPIL
NMMKCNKEVEAVVIVPTRELAMQVSDELFKFGKYLDINTATVYGGQSYSRQLKHISNASI
LVATPGRFLDLLRDKKINIKPNYVILDEADEMLDMGFLDDIKEIFTYMPKQRQTLMFSAT
MPNAIKQLAKTILNEPEFITVTTSEITNSKIKQAFYVVDEYERDDALIRLYDYKNPDKSI
IFCRTKKEVDRLSTFLVSQGFGAKGLHGDMEQRQREEAINAFKKGRLDVLIATDVAARGL
DVNDVTHVFNYHLPFDSESYVHRIGRTGRAGKEGVAVSIVTPHEFRMLQKIQKSTGGRLE
AKTIPNIKSVKDKKTNSLVEKIKAHKVDDSALLIIENLKEEYDISTIAFKLASMLTSATS
VKGSNTIGKSHKDIEKLIESAVRNSSRNNDKRGGQRRRGPRSGGFKNNRNKSSSSSSSSN
RRRRS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttcaagagttcaatttcaaaacaaatttacaaaaatcaattgatgatgcaggc
tttaaagagccaagtccaattcaaaaagatgcaattccagttattttagaaggtaaagac
atagttggtcaagcccacacaggtacaggaaaaacagcagcatttggactaccaatttta
aatatgatgaaatgtaacaaagaagtagaagctgtagtaatcgttccaacaagagaactt
gcaatgcaagtttcagatgaattatttaagtttggaaaatatttagatataaatacagca
acagtttatggtggacaatcttatagcagacaactaaagcatatctctaatgcatcaatt
ttagttgcaacaccaggaagatttttagatttactaagagataaaaaaatcaatattaaa
ccaaattatgtaatccttgatgaagcagatgaaatgcttgatatggggttcttagatgat
attaaagaaatctttacttatatgcctaagcaaagacaaacattaatgttttcagcaact
atgccaaatgcaattaaacaattagcaaaaacaatcttaaatgaaccagagtttattaca
gttacaacaagtgaaataacaaactcaaaaattaaacaagcattttatgttgttgatgaa
tatgaaagagatgatgcacttattagattgtatgattataaaaatcctgataaatcaatt
attttttgtagaacaaaaaaagaagtagatagactttctacatttttagtatctcaaggt
tttggtgctaaaggtcttcatggagatatggagcaaagacaaagagaagaagcaattaat
gcctttaaaaaaggtagacttgatgttttaattgctacagatgtagctgctcgtggactt
gatgtaaatgatgtaacacatgtatttaattatcatttaccttttgattctgaaagttat
gttcatagaattggaagaacaggtcgtgcaggaaaagaaggtgttgctgtttctattgta
actccacatgaatttagaatgcttcaaaagattcaaaaatctactggtggaagattagaa
gctaagacgattccaaatattaaatctgtaaaagataaaaaaacaaattcacttgttgaa
aaaatcaaagcacacaaagttgatgattcagcattattaattattgaaaacttaaaagaa
gagtatgatatttctacaattgcatttaaactagcttcaatgcttacaagtgctacttct
gtaaaaggaagcaatacaattggtaaatctcataaagatattgaaaagttaattgaaagt
gctgttagaaatagtagtagaaataatgataaaagaggcggacaaagaagaagaggtcca
agaagtggaggatttaaaaataatagaaataaatcttctagttcatcttcatcttcaaat
agaagacgaagaagctag
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