Malaciobacter marinus: AMRN_0693
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Entry
AMRN_0693 CDS
T06187
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amar
Malaciobacter marinus
Pathway
amar03420
Nucleotide excision repair
amar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMRN_0693 (rep)
03430 Mismatch repair
AMRN_0693 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amar03400
]
AMRN_0693 (rep)
Enzymes [BR:
amar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMRN_0693 (rep)
DNA repair and recombination proteins [BR:
amar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMRN_0693 (rep)
MMR (mismatch excision repair)
Other MMR factors
AMRN_0693 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AXX86448
UniProt:
A0A347TIM0
LinkDB
All DBs
Position
694961..697012
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AA seq
683 aa
AA seq
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MPLSNLNKEQLEAATCEPGYNLIIASAGTGKTSTIVGRIANLINAGTKPDEILLLTFTNK
AAAEMVQRVAKFFGKDIAAKIMAGTFHSVSYKLLKKLEININLKQPNELKTLFKSLYEKR
VFYNRDDEANPYDGGYLYDLYSLFLNSNDGEEFGEWIMTKNAAHELYTPIYEDVVLEFDD
LKKKYGYVNFDDLLVLMLNTLKENEFDFKEILVDEYQDTNPLQGRLLDGFKPKSLFCVGD
YDQSIYAFNGSDIGIISTFSTRYQGANVYTLRKNYRSSRPILDLASKVIEYNERIYEKNL
QVMRNDVDIKPKLLAFNELFGQYEYISKLISQSSTPHNEIAIIFRNNSSADGIEVNLREF
SIPAKRKGGMSFFDAMEVKFIIDILMLQISRNDMMAFIHLIEYGKGIGKAIAKDIFDALV
KLGHGRLFDGLFNPDDKIKNPYESSKVKNIQLGLFDDFIELGSLAKFKDCGFEERFLSNP
ILKHPKLNVEGANYLYDFYKLLKELKRVKTPSSQIEHIFKSPLFNRVKEILSTKRATQKD
GTVNLELKNNSISKINRKAVLLKRLSTHYTELSKFINSMVLGGSEMSEGDGVNLLSVHAS
KGLEFKEVYVIDLMDGRFPNRKLMSKGGSLEEERRLFYVAVTRAKDILYLSYAKYDRIKK
IDFIHSPFLKEAGLIKDAAKSED
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcaaatttaaacaaagaacaactagaagctgcaacttgtgaacctggatat
aacctaataatcgcaagtgcaggtacaggaaaaacctctactattgttggaagaattgca
aacttaattaatgctggaacaaaaccagatgaaattttactattaacttttacaaacaaa
gcagcagctgagatggtacaaagagttgcaaaattttttggaaaagatattgctgcaaaa
attatggcaggtacttttcactctgtttcatataagctacttaaaaaacttgaaataaat
attaatttaaagcaaccaaatgagcttaaaacactatttaaatctttatatgaaaaaaga
gtattttataatagagatgatgaggcaaatccatatgatggtggctatttatatgattta
tattctctttttctaaactcaaacgatggtgaagagtttggagagtggataatgactaaa
aatgctgcacatgaactttatactccaatttatgaagatgtagttttagagtttgatgat
ttaaagaaaaaatatggttatgtaaattttgatgatttattggttcttatgttaaatact
ttaaaagagaatgagtttgattttaaagaaattttggttgatgagtatcaagatacaaac
cctttacaaggaagattacttgatggctttaaaccaaaatcattattttgcgttggagat
tatgatcaaagtatttatgccttcaatggttcagatattggaattatttcgactttttcg
acaagatatcaaggtgcaaatgtatatacacttagaaagaattatcgttcatcaagacca
attttagatttagcatcaaaagtaatagaatacaatgaaagaatctatgaaaaaaatctt
caagtaatgagaaatgatgtagatattaagccaaagttattagcttttaatgaactcttt
ggtcaatatgagtatatttcaaaacttatatctcaaagtagcacaccacacaatgaaatt
gcaattatttttagaaataattcaagtgctgatggtatagaagtaaacttaagagagttt
agtattcctgcaaagagaaaaggtggaatgtctttttttgatgcaatggaagttaaattt
ataattgatattttaatgctacaaatatctcgtaatgatatgatggcttttattcattta
atagagtatggaaaaggtataggaaaagcaattgcaaaagatatttttgatgcactagtg
aaattaggacatggaagattatttgatggattgtttaatccagatgataagataaaaaat
ccatatgaatcaagtaaagttaaaaatattcagttgggtttatttgatgattttatagag
cttggaagtttagctaagtttaaagattgtggatttgaagagagatttttatcaaatcca
atactaaaacatccaaaactaaatgttgagggtgcaaactatttgtatgatttttacaag
ttattaaaagagttaaaaagagttaaaacaccaagttctcaaattgagcatatttttaaa
agcccactttttaatagagttaaagagatattatctacaaaaagagcgactcaaaaagat
ggtacagtaaatttagaacttaaaaataactccatttcaaaaataaatagaaaagctgtt
cttttaaaaagattatcaacacactacacagaactttcaaagtttattaactcaatggtt
ttaggtggaagtgaaatgagtgagggtgatggtgtaaatttactttcagtacacgcaagt
aaaggtttagaatttaaagaagtttatgtaattgatttaatggatggaagatttccaaat
agaaagcttatgagcaaaggtggaagtttagaagaagaaagacgactattttatgtagca
gttacaagagcaaaagatattttgtatttaagttatgcaaaatatgacagaattaaaaaa
atagattttatacattcaccatttttaaaagaagcaggattgataaaagacgcagctaag
agtgaagattag
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