Alteromonas macleodii Balearic Sea AD45: AMBAS45_11575
Help
Entry
AMBAS45_11575 CDS
T02253
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMBAS45_11575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amb03400
]
AMBAS45_11575
Enzymes [BR:
amb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AMBAS45_11575
DNA repair and recombination proteins [BR:
amb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMBAS45_11575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFT95780
LinkDB
All DBs
Position
complement(2698415..2702038)
Genome browser
AA seq
1207 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLLRQQPMGVFTPETILVESPGMQHWVSMQLATEHGVAMNID
YPLPVRFMWNTARTVLGQDKVPKQSPYRREVLTWRIDNILQDGSLMSAEAFEQVNRYWQS
AGSEQEQGLQRLQLATALADVYEQYLLYRPDWLFKWEANERAVLDDMEIWQSEIWRILVK
EQPLHPARLHQMTLDALEAGHLPNDPANKLPTRVIVFAINTMAPQLIAFFDALAQHIDIH
IFHLNPSVNYWGEAKSSSEQAKLLRLEGLKKWMEDDQSNPLLGNLGKQGRELFNLLTELD
TFEISAFDSPDFEEKNDNAESDNARGLLEYIHNDILQAAQPKPLTRDLREKDDSVTIMCT
HSALREVQVLHDHLLHWLSQDKTRTPSDILVMCPAIENYAPFVDAVFHRVGTKALAGRGQ
VRLPCTIADRSPMDAEPLIAAFMTLLQLPDSRFGVSDIMDYLQLDSVQKRFSVSQDDIEQ
MVVWLKQAHIHWGLNSAHKTAVSEGVDLDDTYSWWWGIRRLLMGMLAPDSEVIVSDLLTI
PDVEGQSALTLGKLIDVVALLGEFAQVLTAPRTAAQWSKALISLRDACFMPIQEQQQSWD
LIAKVAADLAARCEDAGYEHELTLRQVRDLLLNRFSSPDAGNHFMTGQVTVCSMLPMRSI
PFKKVCILGLNDSEFPRKSSPLGLDLMAGAGRQIGDRSRRLEDRYLFLEAIISTRDSLYL
SYQGNDVTNNSERQPSLVLAEFMDMLANSYALDLSKYSVNAPLHPFSEEGFTGILPGYET
GWLRLADALQKTKLNTDEADNESANDADTATLAPSPDALSTQLLRLSGIQIARAFKDPLE
YFSVQRLGVNLSQSFTLLENSEPFETNALLRYQVLDAIFSSAQRIVPEKDDVTPLSYSEK
VVTFASLRGDIPNNPVARDEVDMWKEGALALSQAMGPHDAEPKKAHFQGKYITFTSSALL
GSDALVELCAGKVDAHRALGFFISQLVFSSSVEETNYSNYPLDIYSCTWEKGETILKKQR
FPAYDRETAVRLLLFIEQLYMAVYTAPTPVHLSLFGTFMPGTRNSNTKPVVESIKPEMFT
DILHALLNSTDGTSETDKAILSQVQHAIDETCPFTDKDNAVASETTSEKHERAKQAVDQA
AALFNTIELQRALTDWQQSSGQFSADMASNPYLNWLFPQGVSWNDIPHLSAFVLLAMVNN
ASQEEKL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcgctatatccctctaataaattagaacacttaagttttcttctcaccacgctt
ttacgtcagcagcccatgggtgtgtttacaccagaaaccatcttggttgaaagcccgggt
atgcagcactgggtcagcatgcagcttgccacagaacacggcgtggcaatgaatattgat
taccctttaccagtacgctttatgtggaatacagcacgtacagtacttggacaggacaaa
gtacccaagcaatctccatatcgtcgtgaagtattgacatggcgtatcgacaatattctt
caagatggctctctgatgagcgcagaagccttcgagcaagttaaccggtattggcaaagc
gccggtagtgaacaagagcaggggttacagcgccttcagctagctaccgctctggccgat
gtatacgagcaatacttgttgtaccgcccggactggttgtttaaatgggaagctaacgaa
cgcgctgtacttgatgacatggagatatggcaaagcgaaatttggcgcatattggtcaaa
gagcaaccgctgcatcctgcacgtttgcatcaaatgacgctcgatgcgttggaagctggc
catttaccaaatgatccagcgaataagttgcctactcgtgtcatagtgtttgccattaac
actatggccccgcagctgatcgcgttttttgacgccctcgcgcagcacattgatattcat
atatttcatttaaatcctagcgttaattattggggtgaagcgaaaagcagtagcgaacag
gcgaaattattgcgtttagaagggctcaaaaaatggatggaagatgatcagtcgaacccg
ctgcttggaaacttaggtaaacagggcagagagctattcaacttactcactgaactggat
acctttgagattagtgcgtttgattcaccggattttgaagagaaaaacgataatgctgaa
agcgacaatgctcgtggtctactcgagtatattcacaacgatatcttgcaagccgctcaa
ccgaagccacttactcgcgatttaagagaaaaagacgatagcgttactatcatgtgtacc
cattccgcgcttcgcgaagtgcaggtattacacgaccacttgttacactggttatctcaa
gataaaacgcgcaccccatctgatattctggtgatgtgcccggccatcgaaaactacgcg
ccatttgttgatgctgtatttcacagagtaggcacaaaggctttggctggcaggggacag
gttaggcttccgtgtaccattgcagatagaagcccaatggatgcagagccgttgattgcg
gcatttatgacgctgctacaactgcccgatagccgttttggtgtgtcggacattatggat
tatttgcagttagattcagtgcaaaagcgtttctcagtgtcacaagatgatatcgagcaa
atggtggtttggctaaaacaagctcatattcattggggtcttaatagcgcccacaaaact
gccgtttcagaaggtgttgatctagacgatacctatagctggtggtggggaatacgccga
ttacttatgggcatgcttgcaccagatagtgaagtcattgttagtgacctacttactatt
cccgacgttgaaggacaaagtgcgcttacgctaggcaagcttattgacgttgtggcgctg
ttgggtgagtttgcccaagtattaacagccccaaggacggccgcgcagtggtctaaagcc
ttaatatcgctcagagatgcgtgttttatgccgatacaagagcagcagcaaagttgggat
cttattgccaaagttgctgccgatcttgctgcacggtgcgaagacgcaggttatgaacac
gaactcacccttcgtcaggttcgcgacctgctactcaatcgattctcgtcgccagatgct
ggtaatcactttatgaccggtcaggttacggtgtgttcaatgctgccaatgcgaagcatt
ccgtttaaaaaagtgtgcattttggggctgaacgacagtgaattccccagaaaatcaagc
ccgctaggtctcgatttaatggcaggtgctggccgccaaatcggtgatcgctcacggcgt
ttggaagacaggtatttattcctagaagccattatttccaccagagacagcttatattta
agttaccaagggaacgacgttaccaataacagtgagcggcaacccagtctagtattagct
gagttcatggatatgttagcaaacagctacgcactggatttatcaaagtacagcgttaat
gcgccgcttcacccgttcagtgaagaaggctttacgggaatcttgccgggctacgaaaca
gggtggttacggttagctgacgcgttacaaaaaacgaaattaaataccgatgaagcagat
aatgaatctgccaatgatgcggatacggcaacgttagcgccatcacctgatgcactatca
acgcaattgcttcgtctatcaggtattcaaattgcgagagctttcaaagatccgctggag
tatttctctgtccaacggctgggcgtgaatctgtctcaatcgtttacgctacttgaaaat
agcgagccgtttgaaaccaatgcgctgctgcgttaccaggtgctcgacgctatcttttca
tctgcacagcgcattgtgccagagaaagatgatgttaccccgctttcatatagtgaaaaa
gtggtcacgtttgcttcgcttagaggggatattcccaataaccccgttgctagagatgaa
gttgacatgtggaaagaaggggcgttggcattaagtcaggccatgggccctcatgacgca
gagcctaaaaaagcgcactttcaaggcaaatacatcacctttacttcatcggctttatta
ggcagtgacgcgctagtcgagctatgtgcaggcaaagttgacgcacatcgcgccctggga
ttcttcatctcccaattagttttttcaagtagcgttgaagaaaccaactacagtaactat
ccgctagatatctattcgtgcacttgggaaaagggcgaaaccattttgaaaaagcagcgc
ttccccgcttacgaccgggaaactgctgtgcggttacttttgtttattgaacagctttac
atggctgtttatacagcgccgacaccagttcatttaagtttgttcggtacgtttatgccc
gggaccagaaattcaaacactaagcctgtagtggaaagcataaagcctgagatgtttacc
gacattctgcatgctctactaaatagtaccgacgggactagtgaaaccgacaaagcgata
cttagccaagttcaacatgcaattgacgagacgtgtccgttcactgataaagacaacgct
gtagctagcgaaacgacaagtgaaaaacatgaaagagctaagcaggcggtggaccaagcc
gctgcactttttaacacgatagagttacagcgagcactaaccgactggcagcaaagtagc
gggcagttcagcgccgatatggcaagcaacccttacttaaattggctgtttcctcagggc
gtgagttggaatgatataccgcatttaagtgcttttgtgctgctcgccatggtcaacaat
gcgtctcaggaggagaagctatga
DBGET
integrated database retrieval system
