Alteromonas mediterranea DE: MADE_000001021140
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Entry
MADE_000001021140 CDS
T00747
Name
(GenBank) response regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
amc
Alteromonas mediterranea DE
Pathway
amc02020
Two-component system
amc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MADE_000001021140
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MADE_000001021140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
amc02022
]
MADE_000001021140
Two-component system [BR:
amc02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
MADE_000001021140
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_16
AAA
AAA_2
Mg_chelatase
HTH_8
AAA_3
AAA_assoc_2
AAA_19
nSTAND3
AfaD
TIP49
T2SSE
MCM
PK_C
Motif
Other DBs
NCBI-ProteinID:
AGV53665
UniProt:
T2DL21
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Position
1443814..1445154
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AA seq
446 aa
AA seq
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MSEKASSNPNLLLVDDDKSLLRLLTIRLEGEGYDVTAVEDGQSALRKLQNDSFDVVLSDL
RMPGLDGLSLFEEIMGIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRTLL
QKALSQSQAAQPGDWAKDIITRSPEMLNVLDQAFRIAKREVSVLISGASGTGKELLANAI
HKASNRSDKPFVAINCGALPENLLESELFGHAKGAFTGAVAAHPGLFREADGGTLFLDEI
GDMPMTLQVKLLRALQERQIRPVGSSKHVDIDVRIISATHKDLHKEMEESTFREDLYYRL
NVVNLKLPSLKSRSEDIPLLARSLLQQSAQRHGVNVSQFSDDAMQQLVTSSWPGNVRQLV
NVVEQCVALTQTPVIPLHLVEQALSATKQSWPTLTEARDAFEQQYLHKLLKMTDGNVTRA
AELAGRNRTDMHKLMKKHELDAADFR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaaaggcgagtagtaaccctaacttattgttggttgatgatgataaaagctta
ttgcgcttattaaccattcgcttagaaggcgaaggttatgacgtcacggcagtcgaagat
ggccagtctgccctacgcaaactgcaaaatgacagctttgatgtcgtgttaagcgacctg
cgcatgccgggtcttgatgggttaagcctgtttgaagaaataatgggaattaggaaagat
atccccgttattctaatgacagctcacggcaccattgccgatgcagtggcggcaacgcag
cgcggcgtttttggtttcttacctaagcctgtggatcacgacgaactacgcactttactt
caaaaagcgttaagccagtctcaagctgcgcagccgggagactgggcgaaagatatcatt
actcgttctccagaaatgctcaatgtgttagaccaagcttttcgtatagctaaacgggaa
gtgtcagtgctcataagcggagctagcggcacgggaaaagagctgttagccaatgctatc
cataaggctagcaatagaagcgataaaccatttgtagccattaactgtggcgcattgcca
gaaaaccttcttgaatcagaattatttggtcacgcaaaaggcgcgttcactggagccgtt
gccgctcatcccgggttatttagggaagccgacggcggcactttatttttagacgaaatt
ggcgatatgcccatgacgcttcaagtgaagttgttaagagcgctccaagaacgtcaaata
cgcccagtgggcagtagtaaacatgtcgacatcgatgtgcgtatcatttcagccacccac
aaagacctgcacaaggaaatggaagaaagcacgtttagagaagacttgtattaccgctta
aacgtggtgaatttaaaacttccgtctctaaaatctcgtagcgaagacattccgctgttg
gcgcgttctttattacagcaaagtgcgcagcgccacggtgttaacgttagtcagttttct
gatgacgctatgcagcagctggtaacttcatcttggccgggtaacgtacgtcaattagtc
aacgttgtagagcagtgtgtagcattaacgcaaacgccggtgatcccacttcaccttgtt
gagcaggcactgtctgctaccaagcaaagctggccaacactaaccgaagcgagagatgcc
ttcgagcagcagtacctacataagttactaaaaatgactgacggtaacgtaacgcgggcc
gctgaactggctggtagaaaccgcacagatatgcataagcttatgaaaaaacatgagtta
gatgcggccgatttcaggtag
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