Alteromonas mediterranea DE: MADE_000001022440
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Entry
MADE_000001022440 CDS
T00747
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00260
Glycine, serine and threonine metabolism
amc01100
Metabolic pathways
Module
amc_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MADE_000001022440
Enzymes [BR:
amc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
MADE_000001022440
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Pyr_redox_3
FAD_binding_2
Pyr_redox_2
NAD_binding_8
Lycopene_cycl
DAO
Thi4
HI0933_like
ApbA
Motif
Other DBs
NCBI-ProteinID:
AGV53822
UniProt:
T2DLW2
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Position
3127791..3129443
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AA seq
550 aa
AA seq
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MQTFDYIIVGAGSAGCVLANRLSENPKHKVLLLETGGSDKSIFIKMPTALSIPMNTDKYA
WQFNTEKEPYLNNREMHCPRGKVLGGSSSINGMVYVRGHAKDFDEWEAHGAEGWNYQACL
PYFQKAETWYKGNDAYRGGNGELGVNNGNEMKNPLYTAFIKAGEQAGYDITSDYNAKQQE
GFGPMHMTVKDGVRSSASREYLDPVKHRKNLTIVTGALVTKVVLEDKVAKGVEYVVNGKT
ETARTSNEVILSAGSIGSPHILQLSGIGDSEALAKAGIDVKHHLPGVGQNLQDHLEFYFQ
YKCKQPITLNRKLGLISKGLIGARWLLNRSGLGATNHFESCAFIRSKADVEWPDIQYHFL
PAAIRYDGKSAFDGDGFQVHVGHNKPKSRGSVTIQSADPTVPPKILFNYLQHQDDIEGFR
ACVRLTREIIAQSAFDDFRDGEIQPGEHIQTDEEIDAFVREAVESAYHPSCSCKMGEDDM
AVVNSQTKVHGIKGLRVVDSSIFPTIPNGNLNAPTIMVAEKAADMILGKPALPSQDVPVS
IHPNWQTEQR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgtttgattacattattgtaggtgcaggttctgccggctgtgtattagcgaac
cgcttgtcggaaaaccctaaacacaaggtgctgctgcttgaaaccggtggctctgataaa
agcatttttatcaaaatgccaacagcgctgtctattcctatgaataccgacaagtacgcg
tggcagtttaataccgagaaagaaccttatctaaacaatcgcgaaatgcactgtcctcgc
ggaaaggtgttaggtggctcttcttctatcaatggcatggtgtatgtgcgcggacatgca
aaagactttgatgaatgggaagcccacggcgcagaaggctggaattaccaagcctgtctc
ccgtattttcaaaaagctgaaacctggtacaaaggcaatgatgcttaccgtggcggcaat
ggcgaactgggcgtcaataacggtaatgaaatgaagaacccgctttacacggccttcatt
aaagccggcgaacaagcaggctatgacattacaagcgactacaacgccaagcaacaagag
ggctttggccctatgcacatgaccgttaaagatggcgtgcgcagttctgcgagtcgcgaa
tacctagaccctgttaaacaccgtaagaatttgaccatcgtaacaggcgcactggtaact
aaagttgtgctagaagacaaagtggctaaaggcgttgagtatgtggttaacggtaaaacc
gaaacggcacgtacgtctaacgaagttattttaagcgcgggctcaattggctcaccacat
atccttcaattgtcaggtattggtgatagcgaagccttagccaaagcgggaattgacgta
aaacatcacctgccgggcgtgggtcagaatttgcaagatcacttggagttttacttccaa
tataaatgcaaacaaccgattacgctaaaccgcaaactaggtcttatttcaaagggcctt
attggtgcccgttggttgctaaaccgctctggtttaggagcaacaaatcatttcgaatcg
tgcgcttttatccgttctaaggccgatgtggaatggcctgacattcaataccacttcttg
cctgcggccattcgctatgacggaaagtcagcgtttgacggcgatggcttccaagttcac
gtagggcataacaagcctaaaagtcgaggcagcgtcactattcagtcagccgacccaacg
gtgccgcctaagattttgttcaactacctacagcaccaagatgatattgaagggtttaga
gcatgcgtaagacttacaagagaaattatcgctcagtcagcattcgacgacttcagagac
ggcgaaatacagcctggcgaacacattcagacggatgaagaaatagacgcctttgtacgt
gaagctgttgaaagcgcctaccacccatcgtgttcttgcaaaatgggcgaagacgacatg
gcggtcgtgaactcacaaacgaaagttcacggcattaaaggcctgcgagtggtcgattca
tctattttcccaactattccaaacggcaacttgaatgcgccaaccattatggtggcagaa
aaagctgcggatatgattttgggtaagccggcgctgccatcacaggacgtacctgtgtct
attcacccgaattggcaaaccgaacagcgctaa
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