Alteromonas mediterranea DE: MADE_1001315
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Entry
MADE_1001315 CDS
T00747
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amc03019
]
MADE_1001315
03009 Ribosome biogenesis [BR:
amc03009
]
MADE_1001315
Messenger RNA biogenesis [BR:
amc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MADE_1001315
Ribosome biogenesis [BR:
amc03009
]
Prokaryotic type
rRNA processing factors
MADE_1001315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AEA96412
UniProt:
F2G3T3
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All DBs
Position
286969..288435
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AA seq
488 aa
AA seq
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MSAELLINVTPSESRVALIENGILQEIHVERHTKRGLVGNIYRGKVSRVLPGMQAAFVDI
GLEKAAFLHASDIVIHNEIAEEVSASHIQKQDIRELVRDGQDIVVQVVKDPIGTKGARLT
TDITIPSRYLVFMPSVTHVGVSQRIEEEVERERLKSLVQEFCDENGGFILRTAAEGVGKN
ELQSDAAFLRRLWDKIQSRMKKRKSNVLYEDLPLARRVLRDFVGTELDRIRIDSKLSFNE
LHQFTKEYVPEMNGKLEYYTGDRPIFDLYDVENEAQRALERRVDLKSGGYLIIDQTEAMT
TIDINTGAFVGHRNLEETIFNTNTEATQAIARQLRLRNLGGMILIDFIDMIEPDHKRRVL
HSLEVATNKDRAKINIHGFTALGLIEMTRKRTRESIEHILCGECPVCKGRGTVKTIETIC
FEIMREIVRVNRAYDADKFVVYASPKVAEALMGEESHMLAELEVFVSKQIKVQTETLYNQ
DKYDVVMM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgctgaactgcttattaacgttaccccgtcagagtcgcgagtagcgcttattgaa
aacggaatactgcaagaaatacacgttgaacgtcatacaaaacgcggtcttgtgggtaat
atttatcgcggtaaagtaagccgggtactgcctggtatgcaggctgcgttcgttgatatt
ggccttgaaaaagcagcatttttgcatgcctcagatattgttattcacaatgaaattgct
gaagaagtctcggcaagccatattcaaaagcaagacatccgcgagttggtgcgagatggc
caagacatcgtcgttcaagtggtaaaagaccctatcggcaccaagggcgcgcgtttaacc
acagatatcaccatacccagtcgttacctcgtatttatgccgtcggtcactcacgttggc
gtatcgcagcgcattgaagaagaagtggaacgagagcgtttaaagtcgctggtacaagag
ttttgcgatgaaaacggaggctttatcctacgtactgctgcagaaggtgtaggtaaaaat
gaactccagtctgacgcggcgtttttacgaaggttgtgggacaaaatacagtctcgtatg
aaaaagcgtaagtcgaacgtgctttatgaagatttaccgcttgcgcgacgggtgttgcga
gactttgttggtactgagctagacagaattcgcattgactcgaaattatcatttaatgag
cttcaccagttcaccaaagagtacgtgccagagatgaatggcaaactagagtactacacc
ggtgatcgacctatcttcgatttgtacgatgttgaaaacgaagcgcaacgggcattagag
cgtcgcgttgatttaaaatctggcggctacttgattatcgatcagaccgaagccatgacc
acgatagatatcaatacgggggcctttgttgggcaccgtaatttagaagaaacgattttt
aataccaatactgaagcaacgcaagccattgcgcgtcagctaagattacgcaacttaggc
ggcatgatccttatcgactttatcgatatgattgaaccagaccacaaacggcgtgtctta
cattcgttagaggtggcgacgaacaaggatagagccaaaattaatattcacggtttcact
gcgttggggcttattgagatgacccgcaagcgcacccgtgaaagcatagagcatatactg
tgcggcgaatgtccggtgtgtaaaggccggggcacagttaaaaccattgaaaccatttgc
tttgaaataatgcgtgaaatcgttcgcgtgaaccgcgcatacgatgcggataagtttgtg
gtttacgcctcaccaaaagtggcagaagccctaatgggtgaagagtctcatatgctggca
gaactagaagtatttgtatctaaacaaattaaggtacaaacagaaacattgtacaaccag
gataagtacgacgtcgtcatgatgtaa
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