KEGG   Amycolatopsis mediterranei U32: AMED_1742Help
Entry
AMED_1742         CDS       T01269                                 

Gene name
ddlA
Definition
(RefSeq) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
amd  Amycolatopsis mediterranei U32
Pathway
amd00473  D-Alanine metabolism
amd00550  Peptidoglycan biosynthesis
amd01100  Metabolic pathways
amd01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:amd00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    AMED_1742 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AMED_1742 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AMED_1742 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:amd01011]
    AMED_1742 (ddlA)
Enzymes [BR:amd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     AMED_1742 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:amd01011]
 Precursor biosynthesis
  Amino acid ligase
   AMED_1742 (ddlA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4
Motif
Other DBs
NCBI-GeneID: 9435959
NCBI-ProteinID: YP_003763955
UniProt: A0A0H3CYW5
LinkDB All DBs
Position
1871718..1872812
Genome map
AA seq 364 aa AA seqDB search
MSEKIRVAVVFGGRSSEHTISCLSAGSVLGHLDPERFEAVPVGITREGRWVLGSGDSAQL
AVRGRELPSVDDGQGLVLAGDPSSQGLVAVEAGRESELLSRVDVVFPVLHGAFGEDGTIQ
GLLELAGIPYVGPGVLASAAAMDKETAKKLLAAEGLPVGTFSALKRGQSTLEQTDREKLG
LPVFVKPSRAGSSVGISRVADWAGLDAAIALARATDPKVLVEAAVVGREVECGVLEFPDG
HVEASLPAEIRVLSEDENAWYDFETKYLGDDAELDIPAKLDDALTEKLRAMAVEAFRALD
CQGLARVDFFVTEDHQLIINEVNTMPGFTTKSAYPKMWEVTGMDYPTLLTTLVETAIARG
TGLR
NT seq 1095 nt NT seq  +upstreamnt  +downstreamnt
atgagcgagaagatccgggtggccgtcgtgttcggtgggcgcagcagcgagcacaccatc
tcgtgcctgtccgccggcagcgtcctcggccacctcgatcccgaacggttcgaggccgtc
ccggtcggaatcacccgggaaggccggtgggtgctcggctccggggactccgctcagctc
gccgtccgcggccgggaactcccgtccgtcgatgacggccagggcctcgttctcgccggg
gatccgtccagccagggcctcgtcgccgtcgaagcggggcgggagagcgaattgctttcg
cgcgtcgatgtcgtcttccccgtgctgcacggggccttcggcgaggacggcaccatccag
ggcctgctcgagctcgccgggatcccctacgtcggccccggggtgctcgccagcgccgcc
gccatggacaaggaaaccgccaagaaactgctcgccgccgaagggctgccggtcgggacc
ttctccgcgctcaagcgggggcagtccactttggagcaaaccgaccgggaaaagctcggc
ctccctgtcttcgtcaagccgtcccgggccggctcctcggtgggcatctcgcgcgtcgcc
gattgggccgggctggacgccgccatcgcgctcgcccgcgccaccgatcccaaggtgctc
gtcgaggccgccgtcgtcgggcgggaggtcgagtgcggggtcctcgaattccccgacggc
cacgtcgaagcttcgctgcccgccgagatccgcgtcctgtccgaggacgagaacgcctgg
tacgacttcgaaaccaagtacctcggcgacgacgccgagctcgacatccccgccaagctc
gacgacgccctcaccgagaagctccgggcgatggccgtcgaagcgttccgggcgctggac
tgccagggcctggcccgggtcgacttcttcgtcaccgaagaccaccagctgatcatcaac
gaggtcaacaccatgccgggcttcacgacgaagtccgcctacccgaagatgtgggaggtc
accggcatggactacccgacgctgctgaccaccctcgtcgagacggcgatcgcccgcgga
acgggcctgcgctag

DBGET integrated database retrieval system