KEGG   Amycolatopsis mediterranei U32: AMED_5204Help
Entry
AMED_5204         CDS       T01269                                 

Gene name
lig
Definition
(RefSeq) ATP-dependent DNA ligase
Organism
amd  Amycolatopsis mediterranei U32
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 9439381
NCBI-ProteinID: YP_003767369
UniProt: A0A0H3D9J5
LinkDB All DBs
Position
complement(5775703..5776647)
Genome map
AA seq 314 aa AA seqDB search
MTGPGWREPTLATLTDRRFSDEDWIFERKLDGVRAICVRDSGTPTLYSRNHKVMDNAYPE
IVEALAAQGGPRFVADGEIVAFDGANTSFAALQPRIHVSDPDRARATGVRVYYYLFDLLY
LDDRDTTALPLRQRKALLREAFGFADPLRLSAHRNTEGEKFFEEACRRGWEGVIAKRADA
PYHHGRSPDWLKFKCAQGQEFVIGGFTDPQGARHGFGALLLGYHDDDGLRYAGKVGTGFD
ERLLTSLHARLRDRETARSPFAGPVKEPGAHWVRPELVAQIGFSEWTRDGRLRHPRFAGL
REDKKAADVVRERA
NT seq 945 nt NT seq  +upstreamnt  +downstreamnt
gtgaccggtcccggctggcgcgagccgaccctggccacgctcaccgaccgccggttctcc
gacgaggactggatcttcgagcgcaagctggacggcgtccgcgcgatctgcgtccgcgac
tccggaacgcccacgttgtactcgcgcaaccacaaggtgatggacaacgcctacccggag
atcgtcgaggccctcgccgcccagggcggcccgcggttcgtcgccgacggcgagatcgtc
gcgttcgacggtgccaacaccagcttcgccgcgctccagccccggatccacgtcagcgac
ccggatcgggcccgcgcgaccggcgtgcgcgtctactactacctgttcgacctgctgtac
ctcgacgaccgggacacgaccgcgctgccgctgcggcagcggaaggcgttgctgcgggag
gcgttcggcttcgcggacccgctccggctgtcggcgcaccgcaacaccgagggggagaag
ttcttcgaggaagcgtgccggcgcggctgggagggcgtcatcgccaagcgggcggacgcg
ccgtaccaccacgggcggtcacccgactggctgaagttcaagtgcgcgcagggccaggag
ttcgtcatcggcggcttcaccgacccgcagggtgcccgccacggcttcggcgcgctcctg
ctgggctaccacgatgacgacggcctccggtacgcgggcaaggtcggtaccggcttcgac
gagcggctgctgacgtcgttgcacgcgcggctgcgggaccgggagacggcgcggtcgccg
ttcgccgggccggtcaaggaaccgggggcgcactgggttcggccggagctggtggcgcag
atcggcttctccgagtggacgcgcgacgggcggctgcggcacccgcggttcgccgggctg
cgcgaggacaagaaggccgcggacgtcgtacgggagcgcgcgtga

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