Amycolatopsis mediterranei U32: AMED_5228
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Entry
AMED_5228 CDS
T01269
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AMED_5228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amd04147
]
AMED_5228
Enzymes [BR:
amd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
AMED_5228
Exosome [BR:
amd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AMED_5228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
NPCBM_assoc
DUF4232
Motif
Other DBs
NCBI-ProteinID:
ADJ46991
UniProt:
A0A0H3D8L8
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All DBs
Position
complement(5794096..5796447)
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AA seq
783 aa
AA seq
DB search
MPTFPRRQALGIALGGAVALGVAGHTPAGAAIPVDAAPDRADTPIVPPPPPVPVALDPWF
TCDGIDSASATGGDFDGSGYTFPAEHLPSGQIVTAGGVPFRLGSAAAGAKNNIAATGQRI
DLPKGRYFVGYFLVAGSYGAAGGAATVHYADGSTSTGSLSGPDWYTGSGALVSPFRYAPG
GVVDNNPVSLATGQVWIDPAREAVALTLPVTANPAPNVASLHVFALTLQPVAVGRSALIL
DGRSTANLLTDGGPQAAEATIVNAGTVWLGAGDRVSVTVDVPGGRTTVPATVRSLAPGEQ
ATVRLGLAPNASVPPGTTTNGQIRVTAGRGTLATQQVPITLGVPDFRPADASLSTHRAPY
WFDDAKFGIFIHWGVYAVPAWAPVGQQYAEWYWQNQQDPNGATYAYHRQKYGENFTYDDF
IPLFTAAKFDPRSWLNLIADAGAEYYVLTSKHHDGFALWDTKVSDRNSVKLGPKRNIVDE
LFAASRKYTPQLRNGLYFSLPEWFNPDNPWMGHAPRNPYTGAPLPYTGYTAGKDFVRDYQ
APQVLELISEFDPDVLWFDIGGVNDSRTVLTEYFNRAKNRRRPKDVTYNDRGGIPDHDFT
TPEYTTYPNTVVAKWESSRGLDPFSYGYNRATPDEKYMTAEEVVRTLVDIVSKNGNFLLD
IGPDFDGTIPDVMRKHLRDAGAWLKVNGEAIYGTTYWSRMAQLGDLRFTVKQNEAFYVHS
LTAPGSRVVVDAPVPIRAGDRVTMLGYRGALHWTVENGSLVIDVPAAARQAGRYTWVFKI
AWS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaccttcccccgccgtcaagccctcggtatcgcgctgggaggtgccgtcgcgctc
ggcgtggccggccacaccccggccggcgccgccatccccgtggacgccgcccccgaccgc
gccgacaccccgatcgtcccgcccccgccgccggtcccggtcgccctcgacccctggttc
acatgcgacggcatcgacagcgcgtcggccaccggcggcgacttcgacgggtccggctac
accttcccggccgagcacctgccgtccgggcagatcgtcaccgccggcggcgtcccgttc
cggctcgggtccgcggccgccggggcgaagaacaacatcgccgccaccggccagcggatc
gacctgccgaagggccgctacttcgtcgggtacttcctggtcgccggcagctacggcgcg
gcgggcggcgcggcgaccgtgcactacgccgacggcagcacgagcaccggctccctgtcc
ggccccgactggtacaccggcagcggcgcgctcgtctcgccgttccgctacgcgcccggc
ggtgtcgtcgacaacaacccggtttcgctggccaccggccaggtctggatcgacccggcg
cgcgaagccgtcgcgctgaccctgccggtgacggcgaacccggcaccgaacgtcgccagc
ctgcacgtcttcgcgctcaccctccagccggtcgccgtgggccgctcggcgctgatcctg
gacggccgctcgacggcgaacctgctgaccgacggcgggccgcaggccgccgaggcgacc
atcgtcaacgccgggaccgtgtggctcggcgcgggcgaccgggtgagcgtcaccgtcgac
gtccccggcggccggacgaccgtgcccgcgaccgtccgttcgctggcgccgggggagcag
gcgacggtccggctcgggctggcgccgaacgcgtccgtgccgcccggcaccaccacgaac
ggccagatccgcgtcaccgccggccgcggcacgctcgccacgcagcaggtcccgatcacc
ctcggcgtcccggacttccggccggccgacgcttcgctctcgacgcaccgcgcgccctac
tggttcgacgacgccaagttcggcatcttcatccactggggcgtgtacgccgtgcccgcg
tgggcgcccgtggggcagcagtacgcggagtggtactggcagaaccagcaggacccgaac
ggcgcgacctacgcctaccaccggcagaagtacggcgagaacttcacctacgacgacttc
atcccgctcttcaccgcggcgaagttcgacccgcgttcctggctgaacctcatcgcggac
gcgggcgcggagtactacgtcctgacgtccaagcaccacgacggcttcgcgttgtgggac
acgaaggtcagcgaccgcaactccgtgaagctcgggccgaagcgcaacatcgtcgacgag
ctcttcgcggcgtcgcggaagtacaccccgcagctgcgcaacggcttgtacttctcgctg
ccggagtggttcaacccggacaacccgtggatgggccacgcgccgcgcaacccctacacc
ggcgcgccgctgccctacaccggctacaccgcgggcaaggacttcgtccgcgactaccag
gcgccccaggtgctggagctgatctcggagttcgaccccgacgtcctgtggttcgacatc
ggcggcgtcaacgacagccggaccgtgctcaccgagtacttcaaccgcgcgaagaaccgc
aggcgccccaaggacgtcacctacaacgaccgcggcggcatcccggaccacgacttcacg
acgccggagtacacgacgtacccgaacaccgtggtggcgaagtgggagtcgagccggggc
ctcgacccgttctcctacggctacaaccgcgcgacccccgacgagaagtacatgacggcg
gaggaggtcgtccggacgctcgtcgacatcgtctcgaagaacggcaacttcctgctcgac
atcggcccggacttcgacggcacgatcccggacgtcatgcgcaagcacctgcgggacgcg
ggcgcgtggctgaaggtcaacggcgaggccatctacgggaccacgtactggtcgaggatg
gcccagctcggcgacctgcggttcacggtcaagcagaacgaggcgttctacgtgcactcg
ctgaccgcgccgggcagccgcgtggtggtggacgccccggtgccgatccgcgcgggtgac
cgggtgaccatgctcggctaccgcggcgcgctgcactggacggtggagaacggctcgctg
gtgatcgacgtcccggccgcggcccggcaggcgggccgctacacgtgggtgttcaagatc
gcctggagctag
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