Aeromonas media: B224_0862
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Entry
B224_0862 CDS
T03075
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amed03016
]
B224_0862
Enzymes [BR:
amed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B224_0862
Transfer RNA biogenesis [BR:
amed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B224_0862
Prokaryotic type
B224_0862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHX59893
LinkDB
All DBs
Position
648415..649374
Genome browser
AA seq
319 aa
AA seq
DB search
MSRRRRFKGRDVHGILLLDKPTGLTSNDVLQKVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQYLLEADKRYEVTAKLGERTNTSDSDGEVVSTRPVNVAVGTLIEALDQFRGPI
MQVPSMYSALKHNGRPLYEYAREGIEIEREARPITVFELKLLSFEGDEVRLEVHCSKGTY
IRSLVDDLGEVLGCGAHVTQLRRTQVASYPYDRMLTLEQLECIFEQAKAESIPPREQLDP
LLLPMDTAVASLPEVNMLTAVAAYVNQGQAVQVAGAPQSGQVRMTVGPEREFIGVGEIDD
EGRVAPKRLVRYHDDRDDE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaagacgtcgtttcaagggccgtgacgtacacggtatcctgctgctggacaag
ccgaccggtctgacctccaacgatgtgttgcagaaggtcaagcggatctacaacgcggcc
aaggccggccacaccggcgccctggatcccttggcaaccggcatgttgccgatctgcctg
ggcgaagccaccaagttctcccagtatctgctggaggcggacaagcgctatgaggtgacc
gccaagctgggcgagcgcaccaacaccagcgactccgacggcgaggtggtctccacccgt
ccggtgaacgtggccgtgggtaccctgatcgaggcgctggaccagttccgcggccccatc
atgcaggtgccgtccatgtactccgctctcaagcacaacggtcgtccgctctacgagtac
gcccgtgaaggcatcgagatcgagcgggaagcccgtcccatcacggtattcgagctcaaa
ctgctgagttttgaaggtgatgaagtgcgcctcgaagtgcactgcagcaagggcacctac
attcgctccctggtggacgatctcggcgaagtgctgggctgtggtgctcacgtcacccag
ctgcgtcgtacccaggtggccagctatccctacgacaggatgctgaccctggagcagctc
gaatgtatcttcgagcaggccaaggccgagagcattccgccgcgggagcagctggatccg
ctgctgctgccgatggataccgcagtggcgtccctgcccgaggtgaacatgttgacggcc
gtggccgcctatgtgaatcagggccaggccgtgcaggtggccggtgcgccgcaaagcggc
caggtacgcatgacggtgggccctgagcgcgagttcatcggcgtcggcgagatcgacgac
gaagggcgagtcgcccccaagcggctggtgcgttatcacgacgatcgcgacgatgagtga
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