Astyanax mexicanus (Mexican tetra): 103024392
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Entry
103024392 CDS
T05042
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103024392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103024392
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
103024392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
FYVE_2
PH_9
IQ_SEC7_PH
Fer2_3
Motif
Other DBs
NCBI-GeneID:
103024392
NCBI-ProteinID:
XP_022526495
Ensembl:
ENSAMXG00000015438
LinkDB
All DBs
Position
6:complement(46471752..46516880)
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AA seq
758 aa
AA seq
DB search
MEAPPTSVGDSAPEIQKQHRFDEPGSNSFSADKLALNSSQSSEETALDCLRIDCANDELD
HGKEPDVNHSDTDGNHSDVEHILSELERNHSDTEHDGGALIEAPCEAQDNDVTPRESSGK
IPNRDSGIDSPSCGGDGEVFPNEVPIEEEERNDSIATETESVSCITTENKRDSTQDEDSD
LDEGSSEEPESLEGKSESQKLFNIAQELLHTEEAYVKRLNLLDQVFCTKLTEANIPAEVI
TGIFSNISSIYCFHHQFLLPELQTRITKEWNTHPRIGDILQKLAPFMKMYGEYVKNFDRA
MELVSTWTQRSTQFKSVVQNIQKQDVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPSD
AADRKDAEKALDLISTAANHSNAAIRKMEKMHKLLEVHERLGGEEDIVNPANELIKEGHI
KKMSAKNGTAQDRYLYLFNNMLLYCVPKLRLMGQKFSVRERIEIAGMEVQENVKQNLPYT
FTIIGKQRSLELQARTAEEKEDWIQVIWATIEKHKQNSETFNKAFNSSLSREDEHMSIPD
SPGPWNNSSVDSDGGVHERRSSKKREKEKETCKGCSETFHFTKRKHHCKNCGAAICGKCS
KVLESKNSRLCKQCYEATPGSSAEPKKRTGVEKQLSLTGDCCVLSSQLLVQEKGKHWTKT
WVAITKAEPLVLYLQTSSQDVRGARSISLPGYEVSASLPPSEKPEGKHVFRLSNSQHALL
FSAQDSELMARWLELLSHATKGEVSEMSVSLTDHRKSQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcctcccacctctgtgggggactccgcccccgaaatccaaaaacagcaccgg
tttgacgagccagggtccaactccttctctgcggataaacttgcacttaactcttctcag
agttcagaggaaactgcgttagactgtttacgaatagactgtgccaacgacgaactcgac
cacggcaaggagccggacgttaaccacagcgacacagatggtaaccacagtgatgtggag
cacatcctcagtgaactggagcgtaaccatagtgacacagaacatgatggcggggcttta
attgaggccccctgtgaagcgcaggataacgacgtgactccacgtgaatccagcggaaaa
ataccaaatcgggacagcgggatcgatagcccgtcttgtggaggcgacggagaggtgttt
ccaaacgaggtccccatcgaagaggaggagaggaacgacagcattgctacagaaacggag
agcgtgtcctgtatcaccaccgaaaataagcgggactcgacgcaggacgaagacagtgac
ttggacgagggaagcagtgaagaaccagagagtcttgaaggcaaatctgagtctcagaag
ctgttcaacattgcccaggagctgctccacacagaggaagcttacgtcaaaagactcaac
cttctggaccaggtgttctgtaccaagttaacagaagcaaacattcctgctgaagtgatc
acaggcatcttctcaaacatctcctccatctactgcttccaccatcagtttctgctgcct
gagctgcagactcgaattacaaaagagtggaacacacatccgcgtataggggacattcta
cagaagctggctccgtttatgaagatgtatggagagtatgtgaagaactttgatcgtgcc
atggagctggtcagcacctggacacagaggtcaacccagttcaaaagtgtggtccagaat
atccagaagcaagatgtgtgtggtaacctgacgttgcagcatcacatgctggagccggtg
cagcgcatccctcgatacgagctcctcctcaaagactacctgaagaaacttcccagtgat
gcagcagataggaaggatgcagagaaagctctggatttgatctccacagctgctaaccac
tctaacgctgccatcagaaagatggagaagatgcacaagttgttggaagtgcacgagcga
ctgggtggtgaggaagacattgttaatccagctaatgaactcatcaaagagggccatata
aagaagatgtctgctaagaatggaaccgctcaggacagatatctctacctgttcaataac
atgttgctgtactgtgtgccgaagttgagactgatgggtcagaagtttagtgtgagagaa
agaattgaaatagcagggatggaggttcaggagaatgtgaagcagaaccttccctacact
tttaccatcatcggcaagcagcgctccctcgagctacaggccagaactgctgaagaaaaa
gaggactggatacaggtgatctgggccactatagagaagcataaacagaacagtgagacg
tttaataaggcctttaacagctccttgtctcgtgaagatgaacacatgagcatcccagac
tcaccgggtccctggaataattcctctgtagattcagatggaggggtgcatgagaggagg
agttcaaagaagcgagagaaagagaaggagacgtgtaagggctgcagtgaaactttccat
ttcaccaaacgcaagcaccactgcaagaactgcggagcggctatctgtggtaaatgctcg
aaggtattggagagtaagaacagccgcttgtgtaaacagtgttatgaagcaacaccaggg
agcagcgctgaaccaaagaaaagaaccggggtagagaagcagctctcgttgacgggtgac
tgttgtgttttgagtagtcagcttctggttcaagagaaggggaagcactggactaagacg
tgggtggcgataacgaaagctgagccgctagtgctctacctacagaccagcagccaggat
gtgcgtggagcccggagcatctctctacccggttatgaagtcagcgcgtcgctgccgccc
tcagagaaaccagaaggcaagcacgtgttcaggctcagcaactcccagcatgcattgctc
ttcagcgctcaggattcggaattaatggccagatggttggagcttctttcccacgctaca
aaaggggaggtctcggagatgtccgtcagtttgacagaccacaggaagagccaatga
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