Astyanax mexicanus (Mexican tetra): 103025328
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Entry
103025328 CDS
T05042
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04150
mTOR signaling pathway
amex04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103025328 (lrp6)
04150 mTOR signaling pathway
103025328 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103025328 (lrp6)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103025328 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
103025328
NCBI-ProteinID:
XP_007256094
Ensembl:
ENSAMXG00000000673
LinkDB
All DBs
Position
7:23020384..23085044
Genome browser
AA seq
1618 aa
AA seq
DB search
MGAVLRSLFLCSFCLQIRAVPLLLYANRRDLRLVDAAHGRGNATVVVSGLEDAAAVDFDY
TQGLVYWSDVSEEAIKCTVLNASGPSGIQTTVVSGLASPDGLACDWLGNKLYWTDSETNR
IEVSEFDGSYRKVLFWEGLDQPRAIALDPCRGYMYWTDWGEIPKIERAGMDGTNRAIIID
TDIYWPNGLTLDYSQQKLYWADAKFNFIHRSNLDGTGREVVVKGSLPHPFALTLYEDTLF
WTDWNTHSIHSCNKHTGEERREIHSNIFSPMDIHVFSQKRQPIDVSTPCSPKNGGCSHLC
LLSPVKPFYQCACPTGVELLEDNKTCRIGATQLLLLARRTDLRRISLDTPDFTDIVLHAE
DIRHAIAIDYDPVDGHIYWTDDEVQAIRRSHLDGSDAQFIVTTQVNHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVSGYMYWTDWGEFPKIERAALD
GTDREVMVNTSLGWPNGLALDYAERKIYWGDAKTDKIEVMNMNGTNRRILVEDKLPHIFG
FTLLGDYIYWTDWQLRSIERVHKHTAEREVIVDQLPDLMGLKATYVHQTFGTNPCAENNG
GCSHLCLYKPQGVACACPIGLELISDMSTCIVPEAFLLFSRHTDIRRISLETNNNNVAIP
LTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK
NLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGRPKIDRAA
MDGTGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFG
LTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQGGWNACASTN
GHCSHLCLAVPVSSYVCGCPAHYSLNNDNKTCSAPTSFLLFSQKTAINRMVMDEQQSPDI
ILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQENGNQSMTVVSNSVGGHNLGLQPF
DLSIDIYSRFIYWTSEVTNVINVTRINGTRVGVVLRGEHDKPRAIVVNPERGYMYFTNLQ
ERSPKIERAALDGTEREVLFFTGLSKPVSLAIDNELGKLFWVDMDLRRIESSDLSGANRI
VIEDSNILQPVGLTVFGDHLYWIDRQQQMIERIDKTTREGRTKIQARISALTDIHAVHEI
DMEEYNKHPCTSDNGGCSHICIVKGDGTTSCSCPVHLVLLQDELSCGEPPTCSPVQFPCA
SGEVVCIPQAWRCDGFAECDDESDERGCPVCSEEEFQCDSKQCVDISLRCNGDINCQDRS
DENKCEGHCPPDQFACNSGQCIGKHKKCDHNMDCTDNSDEIGCYPTDEPSPQPTNTIGSI
VGVVMTLFVVGAVYFVCQRVLCPQMTDDGETMTNDFVVHGPSSVPLGYVPHPSSLSGSLP
GMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQ
YTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYTPGRRAPPVSSTAAKG
YTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtgctgcggagtctctttttgtgtagtttctgtttgcaaatacgggctgtg
ccgcttctcctgtatgcaaaccggcgtgacctgcggttggtggacgccgctcatgggcgt
gggaacgccacggtggtggtgagtggcctggaggatgcagctgccgtggattttgattac
acccagggactggtctactggagtgacgtgagtgaggaggcaatcaagtgcaccgtctta
aacgcctccggccccagcggtatccagaccaccgtggtgtccggcctggcctctcccgat
ggtctggcttgcgactggttgggaaataagctttactggacggactcagaaaccaaccga
atagaagtgtcagaatttgatggatcttatcggaaagttttgttttgggaaggcctcgat
cagccaagagcaattgcgttggatccgtgcagagggtatatgtactggacagactggggt
gagatcccgaagattgagagagcgggtatggacggcacaaatcgagccattatcatcgac
actgacatctactggcccaatggactcactttggattacagtcagcagaaactatactgg
gctgatgccaagtttaattttattcaccgctcaaacctggatggcacaggaagagaggtg
gtggtgaagggctcgcttccacacccttttgctctgacactgtacgaggacacactcttc
tggacggactggaacacacactccatccactcctgcaataaacatacgggggaagagcgc
cgtgagatccattccaacatcttctcacctatggacatccatgtcttcagccagaagaga
cagcctattgatgtgagcactccctgctctccgaagaacggtggctgttcccacctgtgc
ctgctgtctccagtaaagcccttctatcagtgtgcttgtcccactggcgtggagctgcta
gaggacaataagacctgccgcattggtgccacacagctcctcctcttagctcgtcgaaca
gacctgcgtcggatctctttggacacgccagacttcactgacatagtcctgcatgcagag
gacatcagacatgctattgccattgactatgatcctgtggacggacacatctactggact
gacgatgaggtgcaggccatccgcaggtctcatctggatggcagtgatgctcagtttatt
gtcaccactcaggtgaatcatccagatggcattgctgttgactggatagcacggaatctc
tattggacagacactggtacagatcgcatcgaggtcacaagactaaacggcacaatgagg
aaaattttgatatctgaagacctggatgagccaagagccattgttctggatcctgtttca
gggtatatgtactggactgactggggagaatttccaaagattgagcgtgctgccctggat
ggtacagatcgggaggtgatggtaaacacttcccttggttggccgaatggactggcacta
gactacgcagagaggaagatatactggggggatgcaaagactgataagattgaggtgatg
aatatgaatggaacaaaccggagaatcttggttgaggacaaactccctcacatatttggt
tttactctcctcggtgactacatctactggacggactggcagctccgaagtattgaacgt
gtgcataaacatacagccgaaagggaagtgatcgttgaccaactacctgacctcatgggc
ctgaaagccacctatgtacaccagacatttggtaccaatccgtgtgctgaaaataacggc
ggctgcagtcacctatgcctctacaagccgcagggtgtggcgtgtgcgtgccctattggc
ctagagctcatttctgacatgagcacctgcattgtgcccgaggccttcctgctcttttcc
cggcacactgacatcaggcggatctccctggaaaccaacaacaacaacgtggccatccca
ctgactggcgtcaaggaagcatcggctttggacttcgatgtcactgacaaccgcatctac
tggactgacatcacactaaagaccatcagccgggcgttcatgaacggcagtgcactggag
cacgtggtggagttcggcctggactaccctgaagggatggcggtggactggcttggcaag
aacctgtactgggcagatacgggtaccaaccgcatagaggtggccaagctggatggtcag
cacaggcaggtcctagtgtggaaggacctcgatagcccacgtgcgctggctctggaccct
gctgaaggtttcatgtattggactgaatggggcgggaggcctaagattgacagagcagcc
atggatggcacaggccgcataactttggtccccaatgtaggccgtgccaatggacttacc
atcgattatgcagaaagacgactctactggactgacctggacactacactcattgaatcg
tccaatatgcttggtcttgagcgtgaagtgatcgcagatgacctgcctcacccatttggc
ctcacgcagtaccaggactacatctactggactgactggagccagcgcagcattgaacgg
gccaacaagaccagtggtcagaaccgcacgctcatacaaggccatttggactacgtgatg
gacatcctggtgttccactcatcacggcagggtgggtggaacgcctgtgcatccaccaat
ggccactgctcccacctctgccttgctgtgcctgttagcagctatgtgtgtggatgtcca
gcacactactccctcaataatgacaacaagacctgtagtgcacccacctcctttctgctg
tttagtcagaagactgctattaaccgcatggtgatggatgaacaacagagcccggacatc
atcttgccaattcacagcctgcgtaatgtccgtgccattgactatgatccacttgacaag
cagctctactggattgactccaagcaaaatgtcattcgtcgtgcccaggagaatggcaat
cagagtatgactgtggtgtctaattcagtgggaggccacaacttgggtctgcagccattc
gacctgagtattgacatctacagtcgtttcatctactggaccagcgaggtcaccaacgtc
attaatgttacccgcattaatggcacgcgtgtgggagtggtccttcgcggtgagcacgac
aaacccagagcaatcgtggtcaacccagagagagggtacatgtacttcaccaacctgcag
gaacgatctcctaagatcgagcgggcagctctggatggcactgagcgggaggtgcttttc
ttcactggcctgagcaaacctgtttccctggctattgataacgagctgggaaagctgttc
tgggtggacatggacctacggcgcattgagagcagtgacctatctggggccaatcgaatt
gtgatcgaggactcgaacatcttgcagccagttggcttgacagtctttggagatcacctg
tactggattgaccggcagcagcagatgatcgagcggattgacaagactacacgtgaaggc
cgaacaaagatccaagcccgcatctctgctctgacagacatccatgctgttcatgagatt
gacatggaagaatacaacaaacatccctgtacctctgacaatggaggctgctcccatatc
tgcattgtaaagggagatggtactacaagctgctcctgccctgttcacttggtcctgtta
caagatgagctttcttgtggagaaccgcccacctgttcaccagtgcagttcccatgtgca
tctggagaggtggtctgcatcccacaggcatggcgctgtgatgggttcgccgagtgtgat
gacgaaagtgatgagcgtggctgccctgtttgctcagaagaggagtttcagtgtgacagc
aagcagtgtgtggacatctcgctgcgctgcaatggagacattaactgccaggaccgctca
gatgagaacaagtgtgaaggtcattgccctccagaccagttcgcctgtaacagtggccag
tgcatcggcaagcataaaaagtgtgaccacaacatggactgcaccgataactctgatgaa
attggctgctaccccactgatgaaccttcaccgcagcccaccaacactatcggctccatt
gttggtgttgtgatgaccttgtttgtggtgggtgcagtctactttgtgtgccagcgtgtg
ctgtgcccacagatgaccgatgacggagagaccatgaccaatgactttgtagtgcacgga
ccgtcctctgtgccgctgggatatgtgccacatcccagctccctttctggctctctgccg
ggtatgtctcgtggaaagtctgtgataggctcattgagtataatgggtggtagcagtgga
cctccttatgatcgtgcccatgtaacaggagcttcctccagcagctcctccagcaccaag
ggcacttactttccccctatcctgaaccctcccccttctcctgctacagtgcgatctcag
tacacaatggagtttggctactcgtccaacagtccctcaacacatcgctcatacagctat
aggccatacagctaccgccacttcgcccctccaaccacaccgtgcagcacagatgtgtgt
gacagcgattacacaccgggacgccgggccccaccagtctccagcactgcggcaaagggc
tacaccagcgacctcaactatgactctgagccctttcctccaccccccaccccgcgcagc
cagtacctctcagccgaggagaactgcgagagctgccctccgtctccttacacagagcgc
agttactcacaccacctgtaccccccgcccccctcaccctgcacagactcatcgtga
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integrated database retrieval system
