Astyanax mexicanus (Mexican tetra): 103025442
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Entry
103025442 CDS
T05042
Name
(RefSeq) LIM/homeobox protein Lhx1
KO
K09372
LIM homeobox protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103025442
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
103025442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103025442
NCBI-ProteinID:
XP_022538745
LinkDB
All DBs
Position
1:complement(10654858..10666846)
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AA seq
405 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKDDYLS
NSNGKDTNLLSVTACSDPSLSPDSQDPLQDDVKDSEIAALSDKEAPSNEADDQNLGGKRR
GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQL
SALGARRHAFFRSPRRMRTLVDRLEPGELLPNGPFSYYGDYQSEYYGPGGNYDFFPQGPP
SSQAQTPVDLPFVPSSGPTGTPLGGMDHPIPGHHPSSEVQRFSDIMSHHPGDSPSPEPGI
PGPLHSMSSDVFGPSPSFTSLSLNGSGYSNHLSHPPSEMNEATVW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtccactgcgcgggctgcgagaggccgattctggacaggttcctgctgaatgtgctg
gacagagcgtggcacatcaagtgcgtgcagtgctgcgagtgtaaatgtaacctaacggag
aaatgcttctcaagggaggggaagctctactgcaaaaatgacttctttaggcgtttcggc
actaagtgtgcgggctgtgctcagggcatctcccccaacgacctggtgaggagggcgcgg
agcaaagtgtttcacctcaactgcttcacctgcatgatgtgcaacaagcagctgtccacg
ggggaggagctctacatcatcgatgagaacaagttcgtatgcaaagacgattatttaagc
aactccaacgggaaggacaccaacctgctctcggtaacagcctgcagtgaccccagtttg
tcgccggactcgcaggaccctctgcaggacgatgtgaaggactcggaaatcgccgctctg
tcggataaagaggctcccagtaacgaggctgatgatcagaacctgggcgggaagcggcgc
gggccgcggaccaccatcaaggccaagcagctagaaacgctcaaagcagcgtttgcggcc
acgcccaaacccacgcgccacatccgggaacagctggcgcaggagaccggcctcaacatg
agagtcattcaggtgtggttccaaaaccggcgctccaaagagaggcgtatgaagcagtta
agcgcgctgggcgcgcggagacacgcgtttttccgcagcccgaggcggatgcgcacgctg
gtggaccggctggagcccggagagcttcttcccaacggtcctttctcctattacggagat
tatcagagtgagtactatggacctggagggaactatgacttctttcctcagggcccgccg
tcctcgcaggcccagaccccagtggacctcccctttgtcccgtcgtcgggacccactgga
acccctctagggggcatggaccatcccatccctggacaccatccgtccagtgaagtacag
cgcttttcagacatcatgtcccaccacccgggggactcgcccagcccggagcccggcatc
cctggacccctgcacagtatgtcctctgacgtgttcggccccagcccttcttttacctca
ctgtccctcaacggaagcggatacagcaaccacctctcccaccccccgtcggaaatgaac
gaggccacagtctggtag
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