Astyanax mexicanus (Mexican tetra): 103025513
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Entry
103025513 CDS
T05042
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103025513 (scube1)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
103025513 (scube1)
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Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
EGF
CUB
hEGF
Motif
Other DBs
NCBI-GeneID:
103025513
NCBI-ProteinID:
XP_022527541
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All DBs
Position
7:complement(38134977..38254576)
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AA seq
1067 aa
AA seq
DB search
MSGRVAAPRASACSLRQQHHSGASYQRNTQLLQPSSLTPLAMGRARFSRYLCLLFVLINA
SRVMGNVGVADADECSEATDDCHIDALCQNTPKSYKCICKAGYKGDGKQCEDIDECDNDY
NGGCVHDCINIPGNYRCTCYDGFMLADDGHNCLDVDECQDNNGGCQQICVNTMGSYECQC
KEGFFLSDNQHTCIHRSEDGMNCMNKDHGCAHICRETPKGGVSCECRPGFELAENQQDCR
LTCNYGNGGCQHTCDDTEVGPVCGCHQKYALHSDSKTCIEKDEAAIESSEFNTTSVADVD
KRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQPDGKTCKDIDECLENNGGC
DHVCRNTVGSFECSCQKGYKLLTNERTCQDIDECSFERTCDHTCINYPGSFECVCHRGYT
LYGFTHCGDIDECSINNGSCEHGCVNTQGSYECVCPPGQKLHWNKKDCVETVNCLPNGKP
APRALLSCTKTGGEEVCSLSCPSNALFLADSENSYTLSCGVPVQPGKATPKRNTTNTTTS
STSTLQSCTETLAQPVKQKARIKIRDAKCHLKPHSKEKYRDVAKQSLQGGQFPCTDDCQV
TFVNLKCESSKKRRRGRKSPSKEVSHITAEFEMEMKEEEASESCNVDCVRERTKQRLQNT
LRTLRRSINNRQFYIQFSGTAYDVALRAARQSERAETCSTGQVLTDGKCVSCSVGTFYSG
EQNQCVQCPPGTYQDRDGQLSCEPCPSTELQGTAGAKNVSECGVRCPAGHFSADGFRPCQ
LCPLGTFQPEVGRVLCFPCGGGLMTKHTGSTSFRECEAKVHCASGHFYNSSTHRCIRCPP
GTYQSEFGQNYCITCPGNTTTDFDGATNVSHCKNQMCGGELGDFMGYIESPNYPGDYPSN
VDCVWTITPPNKRRILIVVPEIFLPIEDECGDVLVMRKSSQPTSITTYETCQTYERPIAF
TSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRLYASENHQEILKDKK
LIKALFDVLAHPHNYFKYTVQESKEMFPRSFIKLLRSKVTRFLRPYK
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgtgttgcggctcctcgcgcctcggcgtgctccctccgccagcagcaccac
agtggtgcctcttatcaaagaaatacacaactactccaacccagctcactcacacctctc
gccatgggcagggcgcgcttttcccgctacctctgtttgcttttcgtcctcattaacgct
tcccgtgtgatgggaaatgtgggagtagcagatgcggacgaatgctctgaggccacagac
gactgccacattgacgccctgtgccagaacacccccaagtcctataaatgcatctgtaag
gctggctataagggagatggcaagcagtgcgaagatatagacgagtgtgataacgactac
aacggaggctgcgtgcacgactgtatcaacatccctggaaactacaggtgcacatgctac
gatggcttcatgctggcagatgatggacacaactgtctagatgtggatgagtgtcaggac
aacaatggcgggtgccagcagatctgtgtgaacaccatgggcagctacgagtgccagtgc
aaggagggcttctttctgagcgacaaccaacacacctgcatccaccgctctgaagacggg
atgaactgcatgaataaagatcatggctgcgcgcacatctgcagggagactcctaaaggt
ggcgtgtcgtgtgagtgccggccggggttcgaactggcggagaaccagcaggactgcaga
ttgacgtgtaactatgggaatggcggttgccagcacacatgtgacgacactgaggtggga
cctgtgtgcggctgtcaccagaaatatgccctccactccgacagcaagacctgcatcgag
aaagatgaggctgcaattgagagctctgagttcaataccacgtcagtagctgatgtggac
aagcgggtgaaacggcgtctacttatggagacctgtgcggtgaacaacggcggatgcgac
cgcacatgtaaagacacagccactggggtccgctgtagctgtcctgtgggcttcaccttg
caacctgacggcaagacgtgcaaagacattgacgagtgtctggagaataatggaggctgt
gatcacgtctgtaggaacacggtgggcagcttcgagtgcagctgtcagaaaggctacaag
ctcctaaccaatgaacgaacctgtcaagatattgacgagtgctcttttgagaggacctgc
gatcacacttgcatcaactacccaggaagctttgagtgtgtgtgtcacagaggctacact
ctctatggctttacacactgtggagatatcgatgagtgcagcatcaataatgggagctgt
gagcatggctgtgtgaacacacagggtagctatgagtgtgtgtgcccgcctgggcagaag
ctacactggaacaagaaggactgtgttgagacggtgaattgcctgcccaatgggaagcca
gctcctcgtgctctgctcagctgcactaagaccggtggtgaggaggtgtgctcgctgtcc
tgcccatcaaacgccctcttcctggcagactctgaaaacagttacactctgagctgtgga
gtaccagtacaaccaggcaaagcgacaccaaagaggaacaccaccaacaccactacctcc
agcacctcaactctgcagagctgcacagaaaccctggcccagcccgttaagcagaaggca
cggataaagatcagggacgccaagtgccacctgaaaccccacagtaaagagaagtatcga
gatgtggccaaacagagcctgcaaggaggtcagttcccctgcacagacgactgccaggtc
acgtttgtgaatctgaagtgtgagtcttctaaaaagcgccggcgtgggcggaagtctcct
tctaaagaggtctcgcatatcaccgccgagtttgagatggagatgaaggaggaagaggct
tcagaatcgtgtaacgtggactgtgtgcgggagaggacgaagcaaaggctacagaacaca
ctgcgaaccctgaggagatccattaacaatcggcagttctatattcagttctcgggaacg
gcgtacgacgtggcgctgcgcgctgcccggcagtcagagagagccgagacgtgcagcacg
gggcaggtcctcaccgacggcaagtgtgtcagctgcagtgtggggactttttacagtgga
gagcagaatcagtgtgtgcagtgtcctccaggaacctatcaggacagagacggccagctg
tcctgcgagccctgccccagcactgagctacagggcactgcaggagccaagaacgtctct
gagtgcggagttcgatgcccggctggacatttctctgctgatggtttccggccgtgccag
ctgtgcccgctgggcacctttcagccggaggttgggcgcgtgctctgcttcccctgcggt
ggaggactgatgaccaaacacacaggaagcacctcattcagagagtgtgaagcaaaagtg
cactgtgcatcaggacatttctacaactccagcactcaccgctgcatccgctgccccccc
ggcacataccagtccgagttcggccagaactactgcatcacctgtcctggaaacaccacc
accgactttgacggagccacaaacgtctctcactgcaagaatcaaatgtgtggaggagag
ctgggagattttatggggtacatcgagtcgcccaactaccccggagactacccatctaat
gtggactgtgtgtggaccatcaccccccccaataaacgccgcatcctcatcgtggtgcct
gagatcttcctgcccattgaggatgagtgtggggatgttctggttatgaggaagagctcc
cagcccacttcaataacgacctatgagacgtgccagacttacgagcggccaatcgccttc
acctcccgctcccgcaagctctggatccagtttaaatccaacgagggaaacagtgggaag
ggctttcaggtgccctacgtcacctatgatgaggattaccagcagctcatagaggacatt
gttcgagatggaagactctacgcatcagagaatcatcaggaaatcttaaaagacaagaag
ctgattaaggctctgtttgacgtcctggctcaccctcataactatttcaagtacacagtt
caagagtccaaagagatgttcccacgctcctttattaagctgctacgctccaaagtcacc
aggtttctacggccgtacaaataa
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