Astyanax mexicanus (Mexican tetra): 103031269
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Entry
103031269 CDS
T05042
Symbol
dhx57
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
3.6.4.13
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103031269 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
RWD
Helicase_C
HA2_C
DEAD
zf-CCCH_4
HA2_N
zf-CCCH
nSTAND3
AAA_22
AAA_19
ResIII
NB-ARC
AAA_14
T2SSE
AAA_30
ATPase_2
Torus
Rad17
zf-CCCH_2
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
103031269
NCBI-ProteinID:
XP_007240425
Ensembl:
ENSAMXG00000002141
UniProt:
A0A8B9LCI5
LinkDB
All DBs
Position
25:21207691..21227673
Genome browser
AA seq
1451 aa
AA seq
DB search
MSGRRRAKPNRGGGRFNKPRGGGGGGGGGGGGGGRKGGNDWDDDDGDFCLNLGPSRSQKP
PPSRGRGGGSFRGTGHASSRGRGRGSGQSLPKFPHNDRGGYRNNKDRRDQARPEQTNLPL
QRIHMTSENQLQVKELLRELQTQEFSTTNSGSEYEGEEDEEKEEEFDELDHREEGQFWNT
HDDGVEYAEDGVYEEDYKEEKSVKPEPVVSLFALGTICRYGFDRERSRQALEAGQCGSGR
ERGGGEVGATLEFLLSQMFSERFGSTALGPQVPDPPSQEECVALRQEEALALTAIYGERF
CERISDRVWTISLDLLWLTESRSRTSQSNSSRNQSGSSSTQLCKFYLRGAGCRFGNRCKF
RHQRQTESSAHRDPNGPSQPGFSSMEPPVYQLEIRFPPGSRYPFQPPLAAFSSTDEALSG
AGRLNVTEHLFSQSITAAQEGEPVVYTLISCLEEDGTVRELLSAPHHKYSVPPPVLAPPA
VTPAKSRSTKSTTANSTVSSATTTSHTVNTVGDVSPRVTPKNTGVSTAQCLNTEDVDDDE
EEYDDSEECVPVEEESYVNFRKKMVKKAEIRVEDVLQDNKKLCREFKRKPSSRRYGSMQQ
QRHKLPVWEEKENILHALEKNQVLVISGMTGCGKTTQIPQYILDYSLNGRPEGVANIICT
QPRRISAIAVASRVSQERAEALGHSTGYQIRLETVRSSSTRLLFCTTGVLLRRLEGDAEL
NGVTHVIVDEVHERTEESDFLLLVLKDLILQRSDLKIILMSATLNADLFSQYFHHCPTIH
IPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSAKQNGPSGQGGRVSKGRPVVDDMDDDD
GWSFTSFMKKDSVKDSIPDQQLGQQELALRYPNYSKSVVKTLAAMDLDKINMDLVESVLE
WIVDGNHDFPPGAVLVFLPGLAEIKQLYEQLQANRMFNNRRAKKCVVYPLHSSLSNEDQQ
AVFTRPPEGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRA
NALQRKGRAGRVASGVCFHLFTSHRFNHHLSQQQLPEIQRVPLEQLCLRIKVLEMFSERQ
LDSVFSRLIEPPAGGSLDAAKHRLCALGALTEAECLTPLGWHLACLPVDVRIGKLMLLGA
IFRCLDPALTIAASLAFKSPFVSPWDKREEANERKLSFSLANSDHLSLLQAYKGWCNAEQ
NGPKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIERMSSKGADGV
LEATGYEANLNADNTKLMSAMLCAALYPXVVQVRSPQGKYKLTSKGAVKMQPKAEELRFM
TKNDGAVHIHPSSVNFTVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVLFGGGQVNV
ELQRGEFIISLDDGWIRFAAASHQVAELVKELRWELDQLLEDKIKNPSMDLITCPRGSRI
IQTIVSLISTQ
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaggaggagagcaaagcccaatcggggtggaggacgctttaataagcctaga
ggtggtggaggaggaggaggaggaggaggaggaggaggagggaggaaaggtggcaatgac
tgggatgatgatgacggtgatttttgtctgaacttgggaccaagtcgttcccaaaaacct
ccgccaagcagaggcagaggagggggttcttttcgaggcacaggtcacgcaagcagtaga
ggcagaggaaggggcagtggtcagagcttgcccaagtttcctcataatgatcgaggtggc
tacagaaataacaaggaccgtcgggatcaagctagacccgaacagacgaatctgccttta
cagagaattcatatgacctctgaaaaccagctgcaagtaaaagaattgctgagagaacta
cagacccaggaattcagcactacaaatagtggctcagaatatgaaggagaggaggatgag
gagaaggaggaggaatttgatgagctggaccatcgtgaggaaggtcagttctggaacact
catgatgatggagtggagtatgcagaggatggagtgtatgaggaagattataaagaagag
aaaagtgtgaaaccagagccggttgtttccctgtttgctttaggaactatctgcagatat
ggctttgatcgagagcgcagtagacaagccctagaagccggacagtgcgggtcaggacgg
gaacgtggaggaggagaagttggagcgacacttgaattcctcctgtctcagatgttctct
gaaaggtttggttctactgccctcggccctcaggtgcctgaccctccctcacaagaggaa
tgtgtggcccttcgccaggaggaggcccttgctttaactgccatctacggagagcgtttc
tgtgaaagaatcagtgaccgggtgtggactatcagtctggatctgctgtggttgactgaa
agccgcagcaggacctcacagtcaaatagcagtagaaaccagtcagggtcttcatctaca
cagttgtgtaagttctacctgagaggagcgggatgtaggtttggaaaccgctgcaagttc
agacaccaaaggcagacagagtccagtgcccacagagaccctaatggacccagccagcct
ggttttagtagtatggaaccgcctgtttaccagctggagatccgctttcctccagggagc
cgttaccccttccagccaccgttagctgccttcagtagcacagatgaagcgctctctgga
gcaggacgccttaatgtgacggaacatctcttcagccagtcaattacagctgcacaggag
ggggagccagtggtttacaccctcatctcctgccttgaggaagatgggacagtcagagag
ctgctttcagctcctcatcacaaatacagcgtaccacccccagtgttggctccccctgct
gttaccccagccaagagccggagcactaagagcaccacagctaacagcacagtgagcagc
gctacaactacatcccacactgttaacactgttggagacgtcagccccagagttacacca
aaaaatacaggagtatctacagcacagtgcctcaacacagaggatgtagacgacgatgag
gaggaatatgatgatagtgaagaatgtgttccggtggaggaagagagttatgtgaacttc
aggaagaagatggtaaagaaagctgagatcagagttgaagatgttctgcaggacaacaag
aaactctgtagagaattcaaaaggaaaccgtcttccaggcgctatggctcgatgcagcag
cagaggcacaagctgcctgtgtgggaggagaaggagaacattctgcatgctctggaaaag
aatcaggttctagtgatcagtgggatgactgggtgtggaaagaccacccagataccccag
tatatcctggattattctctgaatgggcgaccagagggagtggcaaacatcatctgcact
cagccacggcgcatctcagccatcgctgtggcatccagggtttcccaggaacgggccgag
gctctgggtcactccactggttaccagatccgtttggaaactgtcaggtcctccagtact
aggctgctgttctgcacaacaggggttctcttgcggagattggagggagatgctgagctc
aatggagtcacgcatgtcattgtggatgaggtgcatgagcgcacagaagaaagtgacttc
ctattactagtgctgaaggatctaattctgcagagatccgatctgaagatcatcctgatg
agcgctactctgaacgctgatctgttctcacagtacttccaccactgcccaaccatacac
ataccagggcgtacctttccagtggagcagtttttcctggaagatgctattgctaagact
aggtacgtgatagaagatggcagcccttaccgacgctcagcaaagcagaacggaccctca
ggtcaaggcggcagggtcagtaaaggacgacctgtagtggacgacatggatgatgatgat
ggctggtcatttacctccttcatgaagaaagattctgtcaaagactccatccctgaccag
cagctcggtcagcaggagcttgcactgcgatatccaaattactccaaatctgtggtgaaa
actctggctgcaatggacctggataaaatcaacatggatcttgtggaaagtgtcttggag
tggattgtagatggaaaccacgactttccccccggtgctgtcctagtcttcctgcctgga
ttagcagagattaagcagctgtatgagcagcttcaggccaacaggatgttcaacaataga
agagctaagaagtgtgtggtgtatccactccactcttctctgtccaatgaggaccagcaa
gcagtgtttacacgcccacctgagggcgtgactaaaatcatcatctccaccaacatcgca
gagacatcagtaaccattgatgatgtagtttatgtcattgattctggaagaatgaaagag
aaaaggtacgatgccagccgcagtatggagagtctggaagatgtgtgggtgtctcgcgct
aacgctctgcagagaaaaggccgcgcaggccgtgtggcatctggagtctgcttccatctg
ttcaccagccatcgcttcaaccaccaccttagccagcagcaactgcctgagatccagaga
gttcctctggaacagctgtgcctcaggattaaagtgttggagatgttctcggagcgtcag
ctggattctgtgttctctcgactgatagagcctccagcagggggcagtctggatgcagct
aagcaccggctgtgtgcactcggggctctgacggaggctgaatgtctgactccactcggg
tggcatctggcctgtctccctgtggatgtccgtatcggaaagctgatgcttctgggggcc
attttccgctgcctggacccggcgctcactattgctgccagcctggccttcaagagccct
tttgtctcaccgtgggataaacgagaggaggctaatgagaggaaattaagtttttctctt
gccaacagtgaccatctttctctactacaagcatacaagggctggtgtaatgcagaacag
aatggccccaaggctggatatcagtattgcagagagaacttcctgtctatccgtggccta
caggagatagcctgtctcaaaaggcagtttgcagagcttctgtctgatattggctttgta
aaggatggactgaaggccagagtcatcgagagaatgagctctaaaggagcggatggagtg
ctggaggccacaggctatgaggcaaatctgaatgcggacaacacaaagttaatgtcagct
atgctgtgtgctgccctctacccanatgtagtccaggtgcgatccccacagggaaagtat
aagctgacgagtaaaggggctgttaagatgcagcctaaagcagaggagcttcgcttcatg
actaaaaatgacggagcagttcacatacatccctcatcagtcaattttacggtacggcac
tatgacagcccgtatctggtctatcatgagaaagtgaagaccagccgggtgttcattcgt
gactgcagcatggtatgtgtgtatcccatggtgctgttcggtggggggcaagtgaatgtg
gagcttcagcgtggagagttcatcatctctctggatgacggatggattcgatttgctgcc
gcctcacatcaggtggctgaactggtgaaggagctgcgttgggaactagatcagctcctg
gaagacaagatcaaaaaccccagcatggacctcatcacctgcccacgaggctcccgcatc
atacaaaccatagtgtcccttatttcaacccagtaa
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integrated database retrieval system
