Astyanax mexicanus (Mexican tetra): 103036004
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Entry
103036004 CDS
T05042
Name
(RefSeq) LOW QUALITY PROTEIN: secretory phospholipase A2 receptor
KO
K06560
mannose receptor, C type
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103036004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103036004
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amex04054
]
103036004
04090 CD molecules [BR:
amex04090
]
103036004
04091 Lectins [BR:
amex04091
]
103036004
Membrane trafficking [BR:
amex04131
]
Endocytosis
Phagocytosis
C-lectin receptors
103036004
Pattern recognition receptors [BR:
amex04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
103036004
CD molecules [BR:
amex04090
]
Proteins
103036004
Lectins [BR:
amex04091
]
C-Type lectins
Group 6: Mannose receptor family
103036004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
UL45
Gasdermin_C
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
103036004
NCBI-ProteinID:
XP_007237401
Ensembl:
ENSAMXG00000002156
UniProt:
A0A8B9H8K1
LinkDB
All DBs
Position
5:complement(10129964..10174716)
Genome browser
AA seq
1476 aa
AA seq
DB search
MRGHGSGLGFGSGVRAALCSAALLLINSLTSSADPQHELLNRSRLSELYSKGVFLLESIS
QQSCLQAESSGLSLTSCDRPTDALLWKWVSRHRLFNLGTSKCLGFNTTTRPQAEVGIYEC
DVQLHSMWWRCRGNVLYGASQNKLASVGSKVVVKKLSLYEWRIYGAAGESPCAYPYEEIH
TLLGNAHGMICALPFHYNSKWYWDCTSEGREDQHLWCATTSRYDQDEKWGFCPIEVSGCG
QLWESNADLKACYQFNLYSLLTWSQALVSCQSQGGSLFSITHPAEYSYITERLTDMGVMV
WTGLNHLADTGGWQWSDGSPLALLQYMSDMSSSAVLQGQLCGVFNSAVENGPWQSLSCDS
ALPYICKKTPNNSRRVEPLETWQYKETTCPDGWFDHNGFCYRFVEERSSWDNSSSTCRDL
GAQLTSIHSLSELEMLLALIANASDPKVWIGLSIEADFHTVKWSDNSTVTFTSWHWQEPS
RPHRDKRLCVNANRENGNWQLEECEKKHPAVCRTSGLVPLHPTGEWDEGCPEGWKRKGHS
CYKVADREQTFQDAAKGYYCKSPLVTIGDRFEQAFLNSLISANNQSASQFYWTALQDQNK
SGEYRWLTQNGSTTPLTYTNWNQYQPASRGGCVVMVGGQSLGHWVVKNCDSPKALAVCEQ
PVSSYHDVALMPMPHIDVFAPCKEGWESTPRLLHCYKVFHSEKILMGRSWSEAEFFCRAL
GADLASFGHYEEETFVKRLLSKMFHSTAGRWFWTGLTRRDPQSAESWKWSDGTPVGTSFV
EDQNDDVGGHDCAVYSDLINTLMPRPCSTKYEWICKVPRGVELIKPYWYNEQTEPWVFYR
GAEYFLASQTYPWDSVSFACKMMGADLLSVHSKDELDFVRERMSKVPQASWWIGLSAGIG
HEGFSWTDGTAIDYENWKHGRPFKGGGKNCISMSSQTGEWSAGSCSDPLRYVCKRRTVSV
VEIPREPNFIGACPENWFYFGHKCLLLHLPARPEEGKSWTDAQSICSTFQGTLVSIENEI
EQAYVTMLLNGQSAGIWIGLRDTDTMKWSSGKPVTYTNWSPVEPKSSSSEDWTNTDPLCT
VLSNNHNFHFTGKWYDEKCTESGYGFICQKPQDKTKRPSHSNHDPASLDVSQYRNRTYHV
VHGNMSWYEAQWRCLELDGELVSITDPFHQAYLTVLVNRLGGPYWIGLYSEDDGINYQWS
DRSDTVFTHWDSVEDDDGDEDFVLGNCVYMSVTGGWRRADCDEPLRGALCYTPPQRSSAY
SYDVVCQETWVKFGGSCYNFESLVLKMPLEEARTHCRKKDNSSDVLTIRDEKENRFFLEQ
MKNAYDGFQTIWLGIYFNTDNDALTWVDGSAISYSNWRTRAPDTSRMRADTCVSMRVSDT
EWRLANCQDKLGFVCKTRLAEVQEVEIEPVNELHHGVIPAAVLVAVLFFALLAGLLWFVY
KRNTVRFQRLPSLSSAYYSSQTTDSDGNVLLADLET
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggacacggttcggggctggggttcgggtccggggtccgggcggctctttgctcg
gcggcgctgctgctgataaacagcttaaccagcagcgcggatccacagcacgagcttctg
aaccggagccgactctctgaactgtacagtaaaggtgtgttccttctggagagcatttct
cagcagagctgtcttcaggccgaatcctccggtctctctctcaccagctgtgatcgcccc
actgatgccctgctgtggaagtgggtgtctcgccatcgcctctttaacctgggtaccagc
aagtgcctcgggttcaacacgactacccgacctcaggctgaagtgggcatctatgagtgt
gatgttcaactccactctatgtggtggcgctgtcgaggaaacgtactgtatggagcctcc
cagaacaagctggcatcagtgggatctaaagtggtggtgaagaaactcagtctgtacgag
tggaggatctacggggcggccggagagtcgccctgcgcctacccgtatgaagaaatccac
actctgctaggaaatgcccacggtatgatctgtgccctgcccttccattacaacagtaag
tggtactgggactgcacatcagagggcagagaagaccagcatctctggtgtgccaccacc
agccgctacgaccaggacgagaagtgggggttctgtccaattgaagtgtccggctgcggg
cagctgtgggagagtaatgctgatctgaaagcgtgttaccagtttaacctgtactcactg
ctcacctggagccaggcgctcgtctcctgccagtcccagggtggcagcctgttctccatc
acccaccctgcagagtacagctacatcacagaaagactgacggacatgggcgtgatggtt
tggaccggactgaaccatctggccgatactggagggtggcagtggtcagatggatctccc
ctggctttactccagtatatgtcagacatgtcatcgtcggcggtgctgcagggccagctg
tgtggggtgtttaactcggctgtggaaaatggaccctggcagagtctttcctgtgattct
gctctgccctacatctgcaaaaagaccccaaacaacagccggagagtcgagcctctggaa
acctggcagtataaggagacaacatgtcctgatggctggtttgatcataatggtttttgt
taccgatttgttgaggagaggagtagctgggataactcctccagtacctgtcgagatctc
ggagcgcagctgacctctatccattcactgtctgagctggagatgctgctagcgctcatt
gctaacgcctccgacccgaaggtgtggattggtttgtccattgaagccgattttcacaca
gtcaaatggtcagataactcaactgttacttttacatcctggcactggcaagagccatct
cgtccccatcgagacaaacgcctgtgtgtcaacgccaacagagagaatggtaattggcag
cttgaggagtgtgagaagaagcatcccgcagtgtgtcgtacatcaggcctcgtaccctta
catccaacaggagaatgggatgaaggctgtccagagggctggaagaggaaaggacactcc
tgctataaggtggcggatcgggaacagacattccaggatgctgcgaagggctactactgt
aaatcccctctcgtcactatcggagacaggtttgaacaggcctttctgaacagtctgatc
agtgcaaacaaccagtcagcttcccagttctactggacggctttgcaggaccagaacaag
agcggagaataccgctggctgacccagaatggctctacaacaccactcacttacaccaac
tggaaccagtaccagcctgccagtagagggggctgtgtggtgatggtgggtgggcagtct
ctgggtcactgggtggtgaagaactgtgactcccctaaagccctggcagtgtgcgaacag
ccagtcagcagttaccatgatgttgccctaatgcccatgccacatatagacgtgtttgcg
ccctgtaaggaaggatgggagagcaccccccgtctgctgcactgctacaaggtgtttcac
agtgagaagattctgatgggacgctcgtggtctgaggcagagtttttctgcagggctctt
ggcgccgacctggccagcttcggtcactatgaagaggagacgtttgtcaaacggctgctc
tccaagatgttccacagtacggcagggcgctggttctggaccggcttaaccaggagagac
ccgcagtctgctgaatcctggaagtggtcggatggcacaccggtggggacatcgtttgta
gaggatcagaatgatgacgtgggcggacacgactgcgcagtgtacagtgatctgatcaac
acgctcatgccccgcccctgcagcaccaaatacgagtggatctgtaaagtacccagaggt
gtggagctaatcaagccttactggtacaacgagcaaacggagccatgggtgttctatcgt
ggggcggagtatttcctcgccagtcagacgtacccatgggattctgtgtcgtttgcatgt
aaaatgatgggagccgatctgctgtctgtacactcaaaagacgagctggactttgttaga
gagcgcatgtcgaaagttcctcaggcctcttggtggatcggtctgtcggctggtattggg
cacgaaggcttcagttggactgatggaactgctattgattatgagaactggaaacatgga
agaccttttaaaggaggcggaaagaactgcatctccatgtcgtctcagacaggtgaatgg
tcagcagggtcctgttcagatcctctccgctacgtctgcaaacgcagaaccgtctcggtg
gtggagatcccacgggaaccgaattttattggcgcctgtccagagaactggttctacttt
ggtcacaagtgtctgctgcttcacctcccagcccggcccgaggaggggaagagctggaca
gacgctcagtccatctgctccaccttccagggtacactggtgtccatcgaaaatgaaatt
gagcaagcttatgtcaccatgttgctcaatggccagtctgcgggcatttggattggtctg
agggacacagacacgatgaagtggtctagcggcaaaccagtcacttacactaactggtct
ccagtagagcccaagagctcatccagtgaggactggacgaacactgacccactctgtact
gttctttccaacaaccacaacttccactttactgggaaatggtatgacgagaaatgcaca
gagagcggctatggtttcatctgtcagaaaccacaagataaaactaaacgtccatcccac
tccaatcatgaccccgcctccctagatgtctctcagtaccggaaccggacctaccatgtt
gtccatggcaacatgagctggtatgaagcccagtggaggtgtctggaactcgacggagag
ctggtcagcatcacagatcccttccatcaggcgtaccttactgttctggtcaacagactc
ggaggcccttactggatcggcctgtacagcgaggacgatggtataaattaccagtggtct
gaccggagtgacacggtgttcacgcactgggactcggtggaggatgatgatggtgatgaa
gactttgttttggggaactgtgtgtatatgagtgtgacggggggctggaggagagcggac
tgtgacgagccgctgagaggagcgctgtgctacactcctccccagaggagcagtgcatac
tcatatgatgttgtgtgccaggagacgtgggtaaagtttggtgggagctgttataatttt
gaatcattagttttgaagatgcccctggaggaggcgagaacgcactgcagaaaaaaggac
aattcctcggatgttttgacgatccgggacgagaaggagaaccggttcttcttggagcag
atgaagaatgcttatgatggctttcagaccatttggttgggcatttactttaacacagac
aatgatgctctgacctgggtggacggctctgcaataagctattcaaactggcggacgagg
gcaccggacaccagtaggatgagggcagacacatgtgtttcaatgcgggtatcggatact
gagtggcgtctggccaactgccaggacaagctgggctttgtctgcaaaactcgcttagcg
gaggtgcaggaggtagagattgagccggttaacgagctgcaccacggagtcatcccagca
gcagttctggtagctgttctgttctttgcgttactggccgggttgctgtggttcgtctac
aagaggaacacggtgcgcttccaaaggctcccgtcgctcagctccgcctactacagttct
cagaccacggactcggacggaaacgtcctcctcgctgacctcgagacctag
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integrated database retrieval system
