Astyanax mexicanus (Mexican tetra): 103038692
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Entry
103038692 CDS
T05042
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1 isoform X2
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00061
Fatty acid biosynthesis
amex00071
Fatty acid degradation
amex01100
Metabolic pathways
amex01212
Fatty acid metabolism
amex03320
PPAR signaling pathway
amex04146
Peroxisome
amex04216
Ferroptosis
amex04920
Adipocytokine signaling pathway
Module
amex_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
103038692
00071 Fatty acid degradation
103038692
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103038692
09143 Cell growth and death
04216 Ferroptosis
103038692
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103038692
03320 PPAR signaling pathway
103038692
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amex01004
]
103038692
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103038692
Enzymes [BR:
amex01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
103038692
Lipid biosynthesis proteins [BR:
amex01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
103038692
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of breast milk
103038692
Exosomal proteins of breast cancer cells
103038692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
103038692
NCBI-ProteinID:
XP_015456654
Ensembl:
ENSAMXG00000000723
LinkDB
All DBs
Position
21:3399191..3437044
Genome browser
AA seq
697 aa
AA seq
DB search
MQAQDLIRHFRVPDLGDMRQYVQSLPTNILMGMGGFAAITTYWYATRPKALKPPCDLAMQ
SVEIEGGEYARRSILLDDDKLMTHFYNDARTMYEVFLRGIKMSNNGPCLGSRKPKQPYEW
LSYQEVADRAEMIGSALLHRGHSQAGDKYIGIFAQNRPEWTISELACYTYSLVAVPLYDT
LGAEAISYIIDKALLSTVICDVVEKARTILDCVSGREHSIKTIVLMEAFESELTARAQKE
GIQIISLKELEATGKANHKRPMPPKPEDLALICFTSGTTGNPKGAMLTHGNVISNCAGFI
RITEGKLRPNRRDTLISFLPLAHMFERVVECVILVHGARIGYFQGDIRMLMDDLKTLKPT
VFPVVPRLLNRMFDKIFGQANTPLKRWLLDFATRRKESELRSGVVRKDSMWDKLIFSKVQ
ASLGGCVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCSMSMPGDWTAGHVG
APLPCNYVKLVDVTDMNYRAASGEGEVCVKGPNVFQGYLKDPEKTAEAIDKDGWLHTGDI
AKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENVYIQSDPVAQIFVHGDSLQACLVGIV
VPDPDFLPGWAKNRGLEGSYTDLCKSKELKNAILEDLVRLGKEAGLKSFEQVRDIVLQPE
MFSVQNGLLTPTLKAKRTELRNYFREHIDQLYARIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcaggatctgatccggcatttccgggtgcccgacctgggcgacatgaggcag
tatgtgcagagtttgcccaccaacatactgatgggcatgggggggtttgccgccatcacc
acctactggtatgctacaaggcccaaagctctgaagcctccctgcgacctcgccatgcag
tctgtggagattgagggtggagaatatgcccgccgatcaatcctattggacgatgacaag
ctcatgacccacttctataacgacgcccggacaatgtacgaggttttcctacgaggaatt
aaaatgtccaataacggtccttgcttaggatcgagaaaacccaaacagccatatgaatgg
ctttcatatcaagaggttgcagatagagctgaaatgattggctctgcgttgcttcacaga
ggccacagtcaagctggagacaaatacattggcatctttgcccagaacagacctgagtgg
accatttcagagctggcctgctatacatactcactagtggccgttccactgtacgacaca
ctgggcgctgaggccatcagctacattatagacaaagcgcttctctccacagtgatctgc
gacgtggtggaaaaagcacggacgattctggattgcgtgtcgggccgagagcacagcatt
aagaccatcgtgttgatggaagcatttgaaagcgagctcacggcgcgagctcagaaagag
ggcatccagatcatcagcttgaaggagctggaggctacaggcaaagccaaccacaagagg
ccgatgcctccgaaaccagaagacctggctctgatctgcttcaccagtggaactactggg
aatccgaagggagcgatgctcacgcacggcaacgttatctccaactgcgccggcttcatc
cgaataacagaggggaagttgcggccgaatcgtcgtgacactctcatctccttcttgcct
ctcgcgcacatgttcgagagggtggtggagtgtgtaattctggtgcatggagcgagaata
ggatatttccagggtgatatccggatgttgatggacgatctgaagactctgaagcccact
gtgtttccagtcgtccccaggcttctcaaccgcatgtttgacaagatctttgggcaggct
aacacaccgctgaagcgctggctcctggacttcgccaccaggaggaaagagtcggagctc
cgcagtggtgttgtgaggaaggacagcatgtgggacaaactgatcttcagcaaagtccag
gccagtctgggtgggtgcgtgaggctgatgatcaccggagcggcaccagtttcccccaca
gtcctcacattcctaagggctgctctgggttgccagttttatgaaggttacggacagaca
gaatgcactgcgggatgttccatgtccatgcccggagattggacggcaggtcacgtggga
gctcctttgccgtgtaactacgtcaagctggtggatgttactgacatgaactatcgtgca
gcaagcggggagggagaggtgtgtgtgaaaggaccaaatgtgttccagggctacctgaag
gatccagagaagacggcagaggccattgataaagatggatggttgcacacaggagacatc
gccaagtggcttccgaacggaactctgaagatcatcgacaggaagaagcacattttcaag
cttgctcagggagagtacatcgccccagagaagatagagaacgtctacattcagagcgat
cctgtggcgcagattttcgttcatggagacagtctgcaggcgtgtttagtggggattgtg
gtaccagatcctgacttccttccaggttgggccaagaatagaggccttgagggctcctac
acagatctctgcaagagcaaggagcttaaaaatgccattttggaggatttagtgcggctg
gggaaggaggccggtctgaagtcctttgagcaggtgagagacatcgtcctgcaacctgag
atgttctctgtccagaacggccttttaacgcccaccctgaaggcgaagagaactgagctg
aggaactacttcagagagcacatcgaccagctgtacgccaggatcaagatgtga
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