Astyanax mexicanus (Mexican tetra): 103040378
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Entry
103040378 CDS
T05042
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103040378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103040378
Membrane trafficking [BR:
amex04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103040378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
Motif
Other DBs
NCBI-GeneID:
103040378
NCBI-ProteinID:
XP_022533712
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All DBs
Position
16:complement(10447884..10466578)
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AA seq
946 aa
AA seq
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MDEPDLIRPKVLPEDLVSLNPSAADNTNTEDDPYSILREDLETDARDFESPTWSLAVDQQ
YLKAYSKDAIKRQDVIHELIQTEINHVRTLKLLLGVYAYEVRCSLQKEELQLERLFPRLE
HLLREHQQFLYRLKQRRQDCLEPDSKQNYTINKIGDILLAQFSGELRSRLLDGYGVFCSC
HTDAMNYYKDLLQNNKKFQNLMRKIGQMAIVRRLGVPEGILLVTQRITKYPVLVERLIKN
TEDGTEEHKDLTLALKCLKETISLVDEQVHHYEKLRELIARLEPKSLGRMSTGLHIRREE
LLQHGRKLLREGVLSWRAQNRAKDVLVVLMSNLLVLLQEKDQKLIFANLDGKPAVLSLQR
LIVREAAHSDRVMYLIYTSDEKAEMYEFIVSSVEERTSWCQEIWQTIENFSHVIEENEED
LSNHYDFSERLRSYQENLFVIDSQLEGLLQDRLRLFSVMSETLTDSSSLPKRLLPKCSTT
DLLQGAITDVESLQNLLVAGESDVPPPLATDSVDTGLPFRKATTITDLTKNGRGLQDGSR
DRNQRPNSDPHLRELFLDSLELSADDETDAVWSSPLPPPPPYSFNTQLLDTVASLTQKLY
SLQVAMAQQDSEVGVLRAALAERPSRNRGDGLLVQEKQRHLEKQREELLHLQKVYNQQKQ
EQAEWELERQRHQLEHQALQQQLRQREEECARQEALLAEQRDALHQSRQEYQQDLERLRE
SARTVEKQREQLEQQQKKLNKPNIANPGPSFHLEPPQAPPLYPVDNIYPSPEHHVRPSVS
STNFQERPPQVPPRKESIMVSPIKQDVPIQLVSTTNESIKPSSVQQQIPTKLAANKGREK
SSSRGKSHQRTNSAASIEVSYLIPIKPGKEGGSLKARRPTSPRSLPADLYIPPGLVLNTK
PPLHSSTHSSNTHSVRKPSHGSAPHQPDHRKKKDSSSSNREDIYYC
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcccgacctgatcagaccaaaagtcctgccagaagatttggtatcgctgaac
cctagtgctgctgacaacaccaatactgaagatgacccgtactccatcttgagagaggat
ctggagactgacgctcgtgactttgagtctccaacgtggagtttagccgtagatcagcag
tatctaaaggcttattccaaagatgccattaagagacaggatgtcatacatgagctgatc
cagacggagataaatcacgtgcggacgctgaagctgctgctgggtgtgtatgcctacgag
gtgcgatgctctctgcagaaggaggagcttcagctcgagcgactgttcccacgtctggaa
cacttactgagggaacatcagcagttcctttaccgactcaagcagcgccgccaggactgc
cttgaaccggacagcaagcagaactacaccataaataagataggagatatcctcctggct
cagttttcaggtgagctgaggagcaggctgctggatggttatggtgtgttctgcagttgc
cacactgatgcaatgaactactacaaagatctgctgcagaacaataagaagttccagaat
ttaatgaggaaaattggtcagatggcgattgtaaggagactaggagtgccggaggggatt
ctccttgtaacgcagcgcatcaccaagtacccggttctggtggagagactcattaagaac
actgaagatggaacagaggagcacaaggatctaacgttggctttaaagtgcctcaaggaa
accatatctctggtggatgagcaggtgcaccactacgagaagctgcgggagctgatcgcc
cggctggagcccaaatcgctgggcaggatgagtaccggactgcacattcgccgggaggag
ctcctccagcatggtcggaagctgcttcgtgaaggtgtactgagctggagagctcagaac
agagccaaagatgtgcttgtggtgctgatgtccaatctgctggtgctgcttcaggagaag
gatcagaagctgatctttgccaatctggatggaaagccagcagtgctctctctgcagagg
ctgatagtaagagaggcggcccacagtgaccgagtaatgtatctgatctacacgtctgat
gagaaggctgaaatgtacgagttcattgtctccagtgtagaggagcgcaccagctggtgt
caggaaatctggcagaccattgagaatttctcacatgtaattgaagagaatgaggaggac
ctctcaaatcattatgacttctctgagaggctcaggagctatcaagagaatctgtttgtg
attgattctcagttggaagggttgctgcaggacaggctgagactcttcagtgtaatgtct
gagaccctgacggacagttcatctctgcccaagcgcctactgccaaagtgcagcaccact
gacctcctgcagggggcaataacagatgtggagagtctgcagaatctgctggtagctggt
gagagtgacgttcctcctcccctggctacggacagcgtggacacagggctgccattcaga
aaagccaccaccatcacagacttgactaaaaatggtcgcgggctgcaggatggttctaga
gacaggaaccagagacccaactctgatccacatctgagagagctctttctggacagcctg
gagctttctgctgatgatgagacagacgctgtgtggagctctcctcttcctccacctcct
ccttattcctttaatacccagctgttggacacagtggccagtctgacccagaagctctac
agtttgcaggttgcaatggctcagcaggacagcgaggttggggtcctccgcgcagcgctg
gccgagcgcccgtcccgtaaccgtggagacggcctcctggtgcaggagaagcagcgtcac
ctggagaagcagcgtgaggagctactgcacctgcagaaggtctacaaccagcagaagcag
gagcaggctgagtgggagctggagcgccagcgccaccagctggagcaccaggcacttcag
cagcagctcagacagagggaggaagagtgcgcaaggcaggaggcactgctggcagagcag
cgcgacgccctgcaccaaagccggcaggagtatcagcaggacctggagcgactacgggaa
agcgctcgcactgtggaaaagcagagggagcagctggagcagcagcagaaaaagttaaac
aaacccaacatcgctaaccctggaccctccttccacctggagccccctcaggcccctcca
ctctaccctgtagacaacatctaccccagccctgaacatcatgtcaggcccagcgtgtcc
tcaaccaacttccaagagcgcccccctcaggtgcccccacgcaaagagagcataatggtg
tctccaatcaaacaggacgtccccatccagctcgtcagcaccaccaacgagtccatcaaa
cccagctctgttcagcagcagatccccaccaaactggccgccaataagggccgggagaaa
agcagcagcaggggcaagagccaccagcgcaccaacagtgcggcttctatagaagtatct
tatttgattcctattaaaccggggaaagagggaggcagtctgaaagccaggagacccacc
agcccccgctcacttcctgcagatctgtacatccctccaggacttgtgcttaacacaaag
ccccccttacactccagcacacactcctccaatacacactccgtccgaaagcccagccac
gggtcagcccctcatcagccggatcaccgtaaaaaaaaggacagcagcagcagcaacaga
gaggacatttactactgttaa
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