Astyanax mexicanus (Mexican tetra): 103041312
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Entry
103041312 CDS
T05042
Symbol
trim37
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM37
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103041312 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103041312 (trim37)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103041312 (trim37)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103041312 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
HlyD_2
PIN_8
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
103041312
NCBI-ProteinID:
XP_007259498
Ensembl:
ENSAMXG00000008847
UniProt:
A0A8B9JYQ3
LinkDB
All DBs
Position
20:14101949..14130690
Genome browser
AA seq
960 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLTKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVEKNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYESSTFVLANFSTLRQRADPVYSPP
LQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASNDPSKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLILRYQVRSPTFFQKCRDQYWYIS
QLEAAQSSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPSTVASAGPSSRDSRPGKN
CMAEETNQASAAEAKDEDDEEEEEKTQQDDSNELSDGDLEVDCLTGDEDVNPLDGSSTSG
SSTATSNTEENDIDEETMSGENDVEYSGNLDLEEGELPDDIMGATGGSNAGVRGLRRGTG
ASASLLEIDPVILIQLLDLKDRSHVESLWGMQPRPPASLLHNQAAAVPTRKDRDRRPQAV
RRSVPDSGVLTRLKAQMAEVRSKMSDVKGQLEARSVADPRVAPLEHGPAAEPEPAARRKP
SELDLLFKTHGTSRHSRHGGKKAVSPKQEVGGAIGGLSMRRSGDPGEKELRAAGDAAVDL
NLCPRDGPSNADNSVKSLSLHGSPSSLPSTSCSSEKHSSTKPDESLYGASETFSLPVLNG
GPSTGAKQRRTPTLGVGLLTDGSLDCEPEGPGEMRQTLLTLTEPPATSRPDEGLLCQKQS
PHLLAGMSSDSEAECETECENEDEAVAVQAGERQYDALTCSGEQLMADDLSFVSGEATER
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcagagtgtagagagtatagcggaggtgttccgctgcttcatctgtatggag
aagctgcgagatgctcgcctctgccctcactgctccaaactctgctgtttcagctgcata
cggcgctggctgactgagcagagagcccagtgtccgcactgccgagctccactgcagctt
cgggagttagtgaactgtcgctgggcagaggaggtgacccagcagctggacacactgcag
ctgtgtaacctcaccaaacatgaagaaaacgacaaagacaaatgtgaaaaccatcacgag
aagctgagtgtgttttgctggacctgtaagaagtgcatctgtcaccagtgtgctctctgg
ggaggaatgcacggaggacacacgtttaaacccctggctgaaatctacgagcagcatgtg
acaaaggtcaacgaggaggtggccaaactccgccgccggctcatggagctcatcagtctt
gtacaggaagtggagaagaatgtggaagcggtgcgtggagcgaaggacgagcgagtgcgg
gagatcaggaatgctgtagagatgatgattgctcgtctggataatcagctcaagaacaaa
ctcatcacattgatgggtcagaagacatctctcactcaggagactgagctgcttgagtct
ttgctgcaggaggtggagcaccagctgcgatcctgcagtaagagtgagttgatttctaaa
agtccagagatcctgctgatgttccagcaggttcacaggaagcccatgcagtcttttgtc
acaacacctgtaccgccggacttcaccagtgagcttgttcctgcttatgagtccagcacc
tttgttctagcaaacttcagtaccttgaggcagagagcagaccctgtatacagccctcca
ctccaggtgtccggactttgctggagactgaaggtttaccctgatgggaatggagttgtt
cggggaaattacctctctgtttttctggaattgtcagctggactcccagagacgtctaag
tatgagtatcgggttgagatggtacatcaggcctccaatgacccctctaaaaatatcatc
cgggagtttgcttctgactttgaggtcggggagtgctgggggtataaccgcttcttcagg
ctagacttgctggcgagcgaggggtacctcaacatgcagacagacacactcatactcagg
tatcaagtgcgatcacccaccttcttccagaaatgtcgtgatcagtactggtatatctcc
cagctggaggcggcccagtccagctacattcagcagatcaacaatctgaaagagagactg
gcaattgagctcttccgtcggcagaagtctcgaagctcctccccaccagaccgccgcctc
tgtccctccactgtcgcatctgctggaccatccagccgcgactcacggcctgggaaaaac
tgcatggcagaagagacaaaccaggcatctgcagctgaggcaaaagatgaagatgatgag
gaagaagaggagaagacccagcaggatgactctaatgagctgtctgatggtgatctggag
gtggactgtctaactggggatgaagacgtgaacccactggatggtagcagcacatctggc
agctccacggcaacaagtaacactgaggagaacgacattgatgaggaaaccatgtctgga
gagaatgatgtggaatatagtggaaatttggatctggaggagggagagctgccagatgac
atcatgggagccacaggagggtccaatgcaggtgtgcgtggtttgagacgtgggaccgga
gcctcggccagtctgctggaaattgaccccgttatcttaatccagctgctggacctaaag
gaccgcagccacgtagagtcactgtgggggatgcagccgcggccaccagcatcactgctt
cacaaccaagctgctgctgttccaacccgtaaggatcgtgatcgtcgcccacaggcagtg
cggcggtcagtcccggactctggcgtgctgacgcggctcaaggctcaaatggcggaggta
cgcagtaaaatgtcggatgtgaagggtcagctggaggcccgcagtgtggcagaccctcgg
gtagctcctttggagcatggaccagcagctgaaccagagcccgcagccaggagaaaaccc
agtgaactggatctgctgtttaaaacccacggaacatcacgacatagccgacatggtggg
aagaaggctgtttcacctaagcaggaagtaggcggggcaataggaggcctttccatgcgc
aggtctggtgatcctggagagaaggaactaagagcagctggagatgcagcggtggattta
aatctctgcccaagagatggaccctccaatgcagacaattcagtgaagtccctcagtctt
catggatccccttcatcactacccagcacctcttgttcttctgaaaaacactccagcacc
aaacctgacgagtctctttatggagcgtccgaaacatttagccttcctgttctgaacggg
ggtccttcaacaggagccaagcagcgcagaacacccacattgggagtggggctgctgaca
gacggatctttagactgcgaacctgaaggacccggtgaaatgcgccaaacgctgctcacg
ctcactgagccgcctgctacctcccgacctgatgaaggactcttgtgtcagaagcagtct
cctcacctgttggcaggaatgagcagtgacagtgaggctgagtgtgagacagagtgtgag
aatgaggacgaggccgtggctgtgcaggctggagaacgccaatatgacgcacttacctgt
tcaggtgagcagctgatggcggatgatctgagctttgtgtctggagaggctacggagagg
tga
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