Astyanax mexicanus (Mexican tetra): 103041741
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Entry
103041741 CDS
T05042
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04145
Phagosome
amex04510
Focal adhesion
amex04512
ECM-receptor interaction
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103041741
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103041741
09144 Cellular community - eukaryotes
04510 Focal adhesion
103041741
09142 Cell motility
04820 Cytoskeleton in muscle cells
103041741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103041741
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103041741
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103041741
Membrane trafficking [BR:
amex04131
]
Endocytosis
Phagocytosis
Opsonins
103041741
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103041741
Exosomal proteins of colorectal cancer cells
103041741
Exosomal proteins of bladder cancer cells
103041741
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103041741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
EGF
AKNA
Motif
Other DBs
NCBI-GeneID:
103041741
NCBI-ProteinID:
XP_022523300
Ensembl:
ENSAMXG00000008326
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MVIRTQCLLILLTFLKLFCTVDAQGIVYDLLVTAECLPDLLQGGLKAKNVNDVFILTTFH
LQSQAPTRAFRIYNPTDNSDYFDFNMNGKINKVTLRYLKSNGKMGTASFLNVPLADGHPH
NVMLHFSGLTHGTPSMALYVDCRLVQIVEDLPAAFKTLPSGPNKVALKIMPTTAQDIVSD
LKLVLGESVENVAELQDCTLQHGESLGLTSKLEAGPVLELVRMVQELKEKMDQQIRETAN
MRKIIMECVPCDGAKEKTDTAAKCGPGVCFQQSMCIETERGFQCAPCPEGYTGDGVHCAD
VNECQFNPCFPGLRCMNTAPGFRCQSCPRGYSGAELQGVGLTFAKTHKQVCNDIDECQGL
DNGGCTPNSYCHNTVGSFRCGDCKPGYTGDQIRGCRSSGDGSGSDTGTGSGSGSGSGSGS
GSGTAISAALSSRQCGNGQTNPCDVNAECVVERDGSISCVCNIGWAGNGYVCGKDTDIDA
HPDRTLQCQDANCKKDNCMFVPNSGQEDADNDGIGDTCDEDADSDGILNEKDNCWLVKNV
DQKNSDGDLNGDACDNCINVDNSDQRDTDNDGLGDACDDDMDGDGLKNILDNCQRVPNTD
QLDKDNDGVGDACDSCPEVPNPNQSDVDNDLVGDTCDTNIDSDGDGHQNTKDNCPTIINS
SQLDTDKDGLGDECDDDDDNDGILDEQDNCRLVPNKDQADENNDGVGDACTGDFDLDHVI
DRIDTCPENAEVTLTDFRAYQTVVLDPEGEAQIDPNWVVLNQGMEIIQTMNSDPGLAVGY
TAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAEPG
IQLKAVKSKTGPGEFLRNSLWHTGDTKEQVRLLWKDPRNVGWKDKVSYRWNLQHRPQVGY
IRVRFYEGTSLVADSGVVIDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYEEYRA
QHLSS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggtcattcggacacagtgtctgcttattttactgacatttctaaaacttttctgtact
gtagatgcccagggaattgtctatgatctcctggtgactgcagaatgtttgcccgatctc
ctgcaaggtggactaaaggctaagaatgtgaacgacgttttcatcctgaccaccttccac
ctccagagccaagctccaacacgtgcttttcgcatttacaaccctacagataacagcgat
tattttgatttcaatatgaacgggaaaatcaacaaagtgactctgaggtatctgaaaagc
aatggaaagatgggaactgccagcttccttaacgtgccgctggcagatggccatccccac
aacgtcatgctgcatttcagcgggctgacacacggcacgcccagcatggccctgtatgtg
gactgcaggctggtgcaaatagtggaggacttaccggcagcctttaagacgctgccttct
ggccccaataaagtggcactaaaaatcatgcccactacagcacaggacatcgtgtcagac
cttaagctggtgctgggcgagtctgtagagaatgtggcggagcttcaggactgcactctt
cagcatggtgaatcactcggactgacatcaaagcttgaggcgggccccgtgcttgaactt
gtaaggatggtgcaggagctgaaggagaagatggaccagcagatccgggaaaccgccaat
atgaggaaaataattatggagtgtgttccatgtgatggagcgaaggaaaaaacggacact
gcagccaagtgcgggccaggagtttgcttccagcagagcatgtgcatcgagacggagcga
ggtttccagtgtgcgccatgtcctgagggctacactggagatggagttcactgtgctgat
gtgaatgagtgtcagtttaacccgtgcttccccggcctgcgctgcatgaacaccgctcca
ggcttcaggtgccagagctgccccagaggctacagtggggcggagctgcagggggtgggc
ctcacttttgccaaaacacacaagcaggtgtgcaatgacattgatgaatgccagggtttg
gacaacggaggctgcactccaaactcctactgccacaacactgtgggctccttccgctgt
ggagattgtaagcctggttatactggagaccaaatcagaggctgcaggtcgtctggagat
ggttctggttctgatactggaacagggtctggctctggctctggctctggctctggctct
ggctcgggtactgctatttctgctgctctctccagcagacagtgtgggaacggccagacg
aacccctgcgatgtgaatgcagagtgtgtggtagagagagatggaagcatcagctgtgtg
tgcaacattggctgggcaggaaatggctatgtgtgtgggaaggacacagacattgatgct
catcctgacaggactcttcagtgccaggatgcaaactgcaaaaaggacaactgcatgttc
gtgcctaattccggtcaggaagacgcagataacgatgggattggtgacacctgtgatgaa
gatgcagacagtgatggtatcctcaatgagaaggacaactgctggttggttaagaatgta
gaccagaagaacagtgacggggaccttaatggtgacgcatgcgacaactgcattaatgtg
gacaactcggatcaacgggacacggataatgacggtttgggagatgcttgtgatgatgac
atggatggtgacggtctgaagaatattctcgataattgccagagagttcccaacactgac
cagctggacaaagataacgatggtgtgggcgatgcttgtgacagctgccctgaagtgccc
aatcccaaccagtctgatgttgacaatgaccttgtaggagacacatgtgatacgaacata
gacagtgatggagatggacaccagaatacaaaagacaactgccccactatcatcaacagc
tcacagctggatacagataaggacgggctcggggacgagtgtgacgatgacgacgataac
gatggaatcctagatgaacaagacaactgcagactagtgcccaataaagaccaggcagac
gaaaacaatgatggagtgggtgatgcttgcactggagatttcgacctggatcatgtgatc
gacaggattgacacctgccctgagaacgcagaggtcactctgacagacttcagagcttat
cagactgtagtgctggacccggagggggaggctcagattgaccccaactgggtcgtcctc
aatcagggcatggagatcattcagaccatgaacagcgacccgggactggcagtgggttat
acagccttcagcggggtcgactttgaaggtaccttccatgtgaacacggtgactgacgat
gactacgccggcttcatcttcggctaccaggactcgtccagcttctacgtggtgatgtgg
aagcagacggagcagacctactggcaggccgtgcccttcagagccgtggccgagcctggc
attcaactcaaggctgtaaagtccaagaccgggccgggggagttcctgaggaattctctg
tggcacactggtgacaccaaggagcaggtgcgtctgctgtggaaagaccctcggaacgtg
ggctggaaggacaaggtctcgtaccgctggaacctgcagcaccggccacaagtgggatac
atcagggttcgtttctatgaaggcaccagcctggttgcagactctggagtggtgattgac
accagtatgaggggaggccgcctgggggtcttctgcttctcacaggaaaacatcatctgg
tccaatctgagatatcgctgtaacgacacaatcccagaagactacgaggagtacagagcc
cagcacctctccagctaa
DBGET
integrated database retrieval system