KEGG   Astyanax mexicanus (Mexican tetra): 103041741
Entry
103041741         CDS       T05042                                 
Name
(RefSeq) thrombospondin-4-B
  KO
K04659  thrombospondin 2/3/4/5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04145  Phagosome
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103041741
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103041741
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103041741
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103041741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103041741
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103041741
   00536 Glycosaminoglycan binding proteins [BR:amex00536]
    103041741
Membrane trafficking [BR:amex04131]
 Endocytosis
  Phagocytosis
   Opsonins
    103041741
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103041741
  Exosomal proteins of colorectal cancer cells
   103041741
  Exosomal proteins of bladder cancer cells
   103041741
Glycosaminoglycan binding proteins [BR:amex00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103041741
SSDB
Motif
Pfam: TSP_C TSP_3 EGF_CA EGF_3 COMP cEGF EGF_MSP1_1 EGF AKNA
Other DBs
NCBI-GeneID: 103041741
NCBI-ProteinID: XP_022523300
Ensembl: ENSAMXG00000008326
LinkDB
Position
Unknown
AA seq 965 aa
MVIRTQCLLILLTFLKLFCTVDAQGIVYDLLVTAECLPDLLQGGLKAKNVNDVFILTTFH
LQSQAPTRAFRIYNPTDNSDYFDFNMNGKINKVTLRYLKSNGKMGTASFLNVPLADGHPH
NVMLHFSGLTHGTPSMALYVDCRLVQIVEDLPAAFKTLPSGPNKVALKIMPTTAQDIVSD
LKLVLGESVENVAELQDCTLQHGESLGLTSKLEAGPVLELVRMVQELKEKMDQQIRETAN
MRKIIMECVPCDGAKEKTDTAAKCGPGVCFQQSMCIETERGFQCAPCPEGYTGDGVHCAD
VNECQFNPCFPGLRCMNTAPGFRCQSCPRGYSGAELQGVGLTFAKTHKQVCNDIDECQGL
DNGGCTPNSYCHNTVGSFRCGDCKPGYTGDQIRGCRSSGDGSGSDTGTGSGSGSGSGSGS
GSGTAISAALSSRQCGNGQTNPCDVNAECVVERDGSISCVCNIGWAGNGYVCGKDTDIDA
HPDRTLQCQDANCKKDNCMFVPNSGQEDADNDGIGDTCDEDADSDGILNEKDNCWLVKNV
DQKNSDGDLNGDACDNCINVDNSDQRDTDNDGLGDACDDDMDGDGLKNILDNCQRVPNTD
QLDKDNDGVGDACDSCPEVPNPNQSDVDNDLVGDTCDTNIDSDGDGHQNTKDNCPTIINS
SQLDTDKDGLGDECDDDDDNDGILDEQDNCRLVPNKDQADENNDGVGDACTGDFDLDHVI
DRIDTCPENAEVTLTDFRAYQTVVLDPEGEAQIDPNWVVLNQGMEIIQTMNSDPGLAVGY
TAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAEPG
IQLKAVKSKTGPGEFLRNSLWHTGDTKEQVRLLWKDPRNVGWKDKVSYRWNLQHRPQVGY
IRVRFYEGTSLVADSGVVIDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYEEYRA
QHLSS
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggtcattcggacacagtgtctgcttattttactgacatttctaaaacttttctgtact
gtagatgcccagggaattgtctatgatctcctggtgactgcagaatgtttgcccgatctc
ctgcaaggtggactaaaggctaagaatgtgaacgacgttttcatcctgaccaccttccac
ctccagagccaagctccaacacgtgcttttcgcatttacaaccctacagataacagcgat
tattttgatttcaatatgaacgggaaaatcaacaaagtgactctgaggtatctgaaaagc
aatggaaagatgggaactgccagcttccttaacgtgccgctggcagatggccatccccac
aacgtcatgctgcatttcagcgggctgacacacggcacgcccagcatggccctgtatgtg
gactgcaggctggtgcaaatagtggaggacttaccggcagcctttaagacgctgccttct
ggccccaataaagtggcactaaaaatcatgcccactacagcacaggacatcgtgtcagac
cttaagctggtgctgggcgagtctgtagagaatgtggcggagcttcaggactgcactctt
cagcatggtgaatcactcggactgacatcaaagcttgaggcgggccccgtgcttgaactt
gtaaggatggtgcaggagctgaaggagaagatggaccagcagatccgggaaaccgccaat
atgaggaaaataattatggagtgtgttccatgtgatggagcgaaggaaaaaacggacact
gcagccaagtgcgggccaggagtttgcttccagcagagcatgtgcatcgagacggagcga
ggtttccagtgtgcgccatgtcctgagggctacactggagatggagttcactgtgctgat
gtgaatgagtgtcagtttaacccgtgcttccccggcctgcgctgcatgaacaccgctcca
ggcttcaggtgccagagctgccccagaggctacagtggggcggagctgcagggggtgggc
ctcacttttgccaaaacacacaagcaggtgtgcaatgacattgatgaatgccagggtttg
gacaacggaggctgcactccaaactcctactgccacaacactgtgggctccttccgctgt
ggagattgtaagcctggttatactggagaccaaatcagaggctgcaggtcgtctggagat
ggttctggttctgatactggaacagggtctggctctggctctggctctggctctggctct
ggctcgggtactgctatttctgctgctctctccagcagacagtgtgggaacggccagacg
aacccctgcgatgtgaatgcagagtgtgtggtagagagagatggaagcatcagctgtgtg
tgcaacattggctgggcaggaaatggctatgtgtgtgggaaggacacagacattgatgct
catcctgacaggactcttcagtgccaggatgcaaactgcaaaaaggacaactgcatgttc
gtgcctaattccggtcaggaagacgcagataacgatgggattggtgacacctgtgatgaa
gatgcagacagtgatggtatcctcaatgagaaggacaactgctggttggttaagaatgta
gaccagaagaacagtgacggggaccttaatggtgacgcatgcgacaactgcattaatgtg
gacaactcggatcaacgggacacggataatgacggtttgggagatgcttgtgatgatgac
atggatggtgacggtctgaagaatattctcgataattgccagagagttcccaacactgac
cagctggacaaagataacgatggtgtgggcgatgcttgtgacagctgccctgaagtgccc
aatcccaaccagtctgatgttgacaatgaccttgtaggagacacatgtgatacgaacata
gacagtgatggagatggacaccagaatacaaaagacaactgccccactatcatcaacagc
tcacagctggatacagataaggacgggctcggggacgagtgtgacgatgacgacgataac
gatggaatcctagatgaacaagacaactgcagactagtgcccaataaagaccaggcagac
gaaaacaatgatggagtgggtgatgcttgcactggagatttcgacctggatcatgtgatc
gacaggattgacacctgccctgagaacgcagaggtcactctgacagacttcagagcttat
cagactgtagtgctggacccggagggggaggctcagattgaccccaactgggtcgtcctc
aatcagggcatggagatcattcagaccatgaacagcgacccgggactggcagtgggttat
acagccttcagcggggtcgactttgaaggtaccttccatgtgaacacggtgactgacgat
gactacgccggcttcatcttcggctaccaggactcgtccagcttctacgtggtgatgtgg
aagcagacggagcagacctactggcaggccgtgcccttcagagccgtggccgagcctggc
attcaactcaaggctgtaaagtccaagaccgggccgggggagttcctgaggaattctctg
tggcacactggtgacaccaaggagcaggtgcgtctgctgtggaaagaccctcggaacgtg
ggctggaaggacaaggtctcgtaccgctggaacctgcagcaccggccacaagtgggatac
atcagggttcgtttctatgaaggcaccagcctggttgcagactctggagtggtgattgac
accagtatgaggggaggccgcctgggggtcttctgcttctcacaggaaaacatcatctgg
tccaatctgagatatcgctgtaacgacacaatcccagaagactacgaggagtacagagcc
cagcacctctccagctaa

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