Astyanax mexicanus (Mexican tetra): 103044162
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Entry
103044162 CDS
T05042
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X1
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103044162 (rpp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103044162 (rpp40)
03016 Transfer RNA biogenesis [BR:
amex03016
]
103044162 (rpp40)
03029 Mitochondrial biogenesis [BR:
amex03029
]
103044162 (rpp40)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
103044162 (rpp40)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
103044162 (rpp40)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
103044162 (rpp40)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
103044162 (rpp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
103044162
NCBI-ProteinID:
XP_022528885
Ensembl:
ENSAMXG00000001755
LinkDB
All DBs
Position
9:30883308..30892684
Genome browser
AA seq
354 aa
AA seq
DB search
MSPELEQCPRSLLVCEKGNFKNEKSRHESQALKHSFNCRISLLIPECGRLPVMLEKVLSN
FSSYFHVQDFPVSTFLEEKWLDAVKKGGFYALSSKTRIDEDNVVAVLPSGQLILSLDKDT
YEQLGLEGRPSQYSHRKTVRHIVTVDLKSLVLGTKKYQRVLLCLKERVPLKTDFLFTAAG
GAVSLLDLLSKQLYEECRPALHCRTLQDLLCPSLIPSDLKGESGSVTPTQFLEWLGAVSL
SISCDNQATSFLSTYACPEPQSSVSQALLCTVTGLISPQDVCKLLTEIRRYLDEPKLTSW
VSLTVHGCADSPVSWGSAEHGFHKGGENFYNFVCFQNQDYWLHMATGAKDACPP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggagctggagcagtgcccgcggagtctgttagtgtgtgaaaaaggaaacttc
aaaaatgagaaatcccgccatgaatcccaggcgctgaaacacagctttaactgcaggatt
tccttattgatacctgagtgtggaagactgcctgtgatgctggagaaagtacttagtaat
ttcagctcatatttccatgtccaagactttccagtttctacattcctggaagagaaatgg
ctggatgcagtgaagaaaggaggtttctatgcactgtcttccaaaaccagaattgatgag
gacaatgttgttgctgttttgcccagcggtcagctgatcttgtctctggataaggacaca
tatgagcagctgggcctggaaggaagaccttcccaatacagtcacagaaagaccgtcaga
cacattgttactgtggatcttaaatctttggttctgggcacgaagaaatatcagcgggtt
ctgctgtgtctgaaagagagagttccactgaaaaccgacttcctctttacagctgcaggt
ggagctgtatctctcctggacctgctgtcgaagcagttgtatgaggagtgtagacctgct
ctccactgccggactctgcaggacctcctgtgcccctcgctcatcccctctgacctgaag
ggggagagcggttctgtcacgccgacccagttcctggagtggctgggggcggtcagtctc
agtatcagctgtgataatcaggcgaccagtttcctgtccacctacgcgtgtccagagcct
cagagctcggtcagtcaggctctgctgtgcacagtgaccggcctcatctccccgcaggac
gtctgcaaactgctgacagaaatcagacgttatctggatgagccgaagttgacgagttgg
gtctcgctgacggtacacggctgtgcagacagtcctgtgtcctggggatcagcggaacat
gggttccacaaaggtggagaaaacttctacaacttcgtttgcttccagaaccaagactac
tggttacatatggctactggagcaaaagacgcctgtccaccttga
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