Astyanax mexicanus (Mexican tetra): 103046997
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Entry
103046997 CDS
T05042
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
Organism
amex
Astyanax mexicanus (Mexican tetra)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
103046997
NCBI-ProteinID:
XP_022540132
Ensembl:
ENSAMXG00000005499
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Position
25:complement(4938142..4959539)
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AA seq
996 aa
AA seq
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MSQTVPSACGMLCYWGEEVRAGFGLLKPDGVQRSDWGVSCCSPKTRITQITPGGRLLGFV
RGEGSVSFIRAPPTGGLQGGRLKKLELKDKIRSMSCGENDAVLLTNEGKVFQLNKYNICS
PIKYLADRTVIQIACGDQHCMALTDDGQLFTWGQNSSGQLGLGKKDESSSQSPQPLKSMT
GIPLAQISAGGDHSFALSLSGVVFGWGRNNTGQLGLGDREDRYVPVCVKSLNRKKTVLIS
CGEDHTAVLTKDGLVFTFGSGCYGQLGHNSFSDELRPRLLGGLWGSEVSQIACGRHHTLA
LVGSSKTIYSFGCGEQGQLGNGQHTNQCVPLPVQLLHSESCLDQTVERIIAGGNLSVACC
AKQNGEVATADSSARSSKGISVLDDELIENWIVNCEKAKTWHKVKRKIKMLFSSASSISA
SFIDKCKDKHYKTSEGHSGLDLSLARCAFEKLAKQQKILLEVESVVERDLLPSLKNTTAA
GIEALRVYLILPELLRVLRKIQRGTQLTIDLAKAILKLDQESLNLLTNLWTRMPYYYYRT
AVRMFHSVAAHFISQMMTDISCWDALKPTLHVLQKLYEVNSQRVTRLTEGFFYIKEINIF
FVWSYWDLLEYESLHSLETMEKIDIFVSFPSALDLKSKCRLFMELQNREQLGMFGCRNVL
CVNRETVLADTLTYLKTEEHDFCFTLQVKFVLEDGHDDGGLCKEYFRLIGQDLAKSSGLI
QSNEDSKLFWFSADTSGTTDGFYYLGIICGMAFYNQVHLNIGFPLALFKKLLHLNPTLRD
LEELSPVEARNLKNLLTEDEDVVEKFYLDFTLHGKELIPNGQEVLVTKVNRQKYVDLYVD
YFFNKSVEYQFTEFAKGFSEGVHVEFWTMFLPEELRLLLYGTCEYKWEELQKIATYEGCG
PLDDLIQNFWTVFLELSEEHQKKFLVFMYGSDWLPVGGLSQLRLNIRKRVYENADERFPA
AQTCYGNLELPNYSNIDVLRARLVHAITCCETFGVA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccgtcccgagcgcgtgcgggatgctgtgctactggggggaggaggttcgg
gcggggttcgggctgctgaagcctgatggggtgcagagatcagactggggggtttcctgc
tgctccccaaagacccggatcacacagatcacccccggggggaggctgctgggcttcgtg
cggggagaggggagcgtgtccttcatcagagcgccaccaacaggggggctgcagggcggc
aggctgaaaaaactggagctgaaggacaagataagatcgatgagctgcggagagaatgat
gctgttcttctgaccaatgaaggaaaagtttttcagctgaacaaatataatatatgcagt
cccatcaaatacctggctgatagaactgtaatacagattgcatgtggagaccagcattgc
atggcactaactgatgatggtcagctgttcacgtggggtcagaactccagtggtcagctg
ggtttggggaaaaaagatgagtccagctctcagtctcctcagcctctcaaatcaatgact
gggatcccgttggctcagatcagcgcaggtggagaccacagcttcgccctgtctctttct
ggagtcgtgttcggctggggcaggaacaacactggacagctgggcctgggggacagagaa
gataggtatgttcctgtctgtgtgaaaagcctaaaccggaagaagacagtgctcatctca
tgtggagaggaccatactgctgttctaacaaaggatggactggtgttcacattcgggtcg
ggatgttacgggcagctcggacataactcattcagtgatgagcttcgacctcggctactc
ggcggactctgggggtcagaagtgtcccaaatagcctgtggacgacatcacactctagcc
ctggtgggatcatctaaaacgatctactcatttgggtgtggagagcaggggcagctggga
aatggacaacacaccaatcagtgtgttccactccctgtacaactgttacattcagaaagc
tgcctggatcagacagtggagagaatcattgctggaggaaacctttctgttgcctgttgc
gccaaacagaatggggaggttgccactgctgattcatcagccagatcttctaaaggaatt
tcagtactggatgatgaacttattgagaactggattgtgaactgtgaaaaagcaaaaaca
tggcacaaggtaaagaggaaaatcaagatgttattctcatcagcatcgtcaataagtgcc
agcttcattgacaaatgcaaggataaacattacaaaacatccgaaggtcattctggtctg
gatttgtctttggctcgctgtgcttttgagaagctggctaaacagcagaagattctgctt
gaggtggaaagcgtagtggagcgggatctactcccctctctgaagaacaccactgctgct
ggtatagaagctctgagagtttacctcattctgcctgaactcctcagagtgctcagaaaa
atccagcgtggcacacagctcaccatagatctggccaaagccattttaaaactggatcag
gagtcactgaatttactgacaaacctgtggaccagaatgccctattactactacagaaca
gcggtgaggatgtttcactctgtggcagcacacttcatatcccagatgatgactgacata
agctgctgggatgcattaaagcctacgctgcatgttctgcagaagctgtatgaggttaac
agtcagagagtcacacgtctgactgaaggatttttctatataaaggagatcaacatcttt
tttgtttggagttactgggaccttctagaatatgaatccctacattccctggagacaatg
gaaaaaatcgacatctttgtctctttcccttctgcccttgacctgaagagtaaatgcagg
cttttcatggaactgcagaacagagagcagctagggatgtttgggtgtagaaatgttctc
tgtgtgaacagggagaccgtcctagcagacactctcacctacctgaaaacagaagagcat
gatttttgtttcacgctacaggtgaagtttgttctggaggatgggcacgatgatggaggt
ttgtgtaaagaatacttcagactgattggtcaggatctagcaaaatcctccggcctgatt
caatcaaatgaagattcaaaactcttctggttctctgcagatacgtctggtaccacagat
gggttttactacctgggcataatctgcggaatggccttttataatcaggtccatttaaac
attggatttccattagcactcttcaagaagcttctgcacttgaatccaactctcagggac
ctggaggagctgtcccctgtggaggccagaaacctgaaaaatctgctgacagaagatgag
gacgttgtggaaaaattctacttggatttcacattgcatggaaaagagctcattcccaac
ggacaggaagtcctggtcaccaaagtcaacaggcagaaatatgtggacttgtacgttgac
tattttttcaacaagtctgtggagtatcagttcacagaattcgcgaaaggtttttctgaa
ggcgtccacgtcgagttctggacgatgtttctgcctgaagagctcaggcttcttctctac
ggcacgtgcgaatacaagtgggaggagcttcagaagatcgccacttatgaaggctgtgga
cccttagacgacctcatccagaatttctggactgtttttctggagctctctgaagaacac
cagaagaagtttctggttttcatgtacgggtcagactggctgccggttggaggactctct
cagttgaggctgaacatcaggaaacgtgtttatgaaaacgcagatgagcgtttcccagcg
gcacagacctgttacggcaacctggagcttccaaactacagcaacatcgacgtcctccga
gccagactggttcatgctatcacctgctgtgagacttttggggtggcatga
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