KEGG   Astyanax mexicanus (Mexican tetra): 103047243
Entry
103047243         CDS       T05042                                 
Symbol
med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
  KO
K15164  mediator of RNA polymerase II transcription subunit 13
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amex03021]
    103047243 (med13)
Transcription machinery [BR:amex03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    CDK-module
     103047243 (med13)
SSDB
Motif
Pfam: Med13_C MID_MedPIWI Med13_N DUF3192
Other DBs
NCBI-GeneID: 103047243
NCBI-ProteinID: XP_022536786
LinkDB
Position
20:complement(12337212..12468682)
AA seq 2157 aa
MSACFVPNGASLEDCHSNLFYLADLTGIKWKGYVWQGPTSAPMLFPVTEEDPILSSFSRC
LKADVLSVWRRSQRQGRRELWLFWWGEDPIFSELIHSELTGEDDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRLGKWFVKPYEKDEKPINKSEHLSCSFSFFLHGDSNVCTSVEI
NQHQPVYHLSEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWKQFY
PISTSSKESTEDKMEDIDWEDDSLAAAEVLVGGVRMVYPACMVLVPQADIPTITPVGSSH
CTAVYSGGHQVPASNRDPAISSVTLTPPTSPEEAQTVDSLTAQKWMRLPSAVDGFSVDSA
SHHGGKIPRRMASQVVERVWQECNMNRSLNKRKFSATGSGTSEEEVMEKMGSWDFVESVQ
RTTCNCSRHKTLKQRVGGAQGQPVSTGQVQQQPIKHKAGEKLDKGDKQQKRPQTPFHHRS
SVSDDISMEADASASQRLALRGQECGRFTGLHPAEVCTVPKPPLLHTGGGAAGGAGVPSE
LVGSPQPPPLSPHPCDRVEEGSETLKNLSTPHSQHFYPTPSEPCLLPQKGPDDPCADSLA
HPFHPAYSEATEPTVYIGTAVCLENDGNHMPWRFFNLPRRKDLDLPTPSLPTDKLKEEGL
MGVNGNVSITEVMAISKHTLKVSGERVQTYLQRRNQHLAAAIADSDLEPEVDPYAFVDGD
VKFTFSDKKDKAGIEREQGRKHKGDDGGAGTLDDAQRGAAHKTASSTSLIHDSDLTVSFK
DLDNLFNSDEDEQTPGARRAVNGTDDKFGSKEPKTAMLDPVSCISSADLNQIFPTPPSLE
PHIMGYSPMNMGGKEYGNMEPGPGMTSLDGSSALVSQFKIEVEESFCSPKPSEIKDFSFV
YKPELCQAFVGCSMFAPLKTLPSQCLPPIRLLEECVYRPSWSVGKLELLNPIPAMNFLNR
DSNIPSVGSAMEQDYNQSYTPQTHTPFISNSAPPSNSGTGILPSPATPRFSAPTPRTPRT
PRTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLFVTLILSES
VMNLFKDCNFDSCCICVCNMNIKGADVGVYINDPNMEAQYPCSCGFSAVVNRRYGNGSGL
FLEDELDIIGRGSDVSREAEKRFEALRSTSLEKSPGGLQDRNPDELILLLQDQCTNPFPP
LVAAEPEGTASGAPGSSVVPPCVRVEERDFHNDCYLALEHGRQFMDNMSGGKVDEVLVKS
TCLHHWAKCNAVDVSALCSQDVLRVLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLVGFEYDFVVLSPFGLPYWEKLLLEPFGSQRDMGYLVLCP
ENEALINGAKSFFRELTAVYESCKLGQHRPISKVHADGIVRVGGAAAKKLSEQPISDWFL
KGVCSTTEAFAKLKLFAQFCRHDLAPYLATQPLDSSLLTQPSPASYTTQTLPAQSSGSAS
SNPQSSLASGVSSLTSNTGTGNVGQGLQGSTSSMPSSGPQNGSVQPSKPSSFPPFGGMGV
QSNSSQSGALGQQAGSQSSNLSGDNSSSSSQTQGSSEPPESTMEREKVGVPTDGESHAIV
YPPAIMIYIVDTFSYEDAETGVAHSSVWTLGLLRCYLEMVQFLPPHIRNSISVQIIPCQY
LLQPVKSEERQLYAQHLKSLAFSVFSQCRRPLPASTNVKSLTGFGPGLALDTALRSPERP
ECLRMYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDMYGEL
LETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMTSVPWRVVIGRLGRIGHGELR
DWSILLSRRNLQSLSRRLKDMCRMCGISSADTPSILSACLVAMEPQGSFIIMPDSVSTGS
VFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVNSSSYTPEDIAFNPINDGSDPIG
GIFDLLEQESDLVDPDIISILPASPTTSPVHSPGSQYHHGGDGSKGQSTDRMESHDEAPN
ILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHIHVSSVQSDELLHGKH
SHPLDSSQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQLYNFIMNML
NT seq 6474 nt   +upstreamnt  +downstreamnt
atgagtgcttgttttgtgccaaacggggccagcttggaggattgccattccaatctattc
tatctggctgacctgactgggatcaaatggaagggttatgtgtggcagggtcccacctcg
gcacctatgctctttcctgtaacagaggaagaccccatcctcagcagcttcagccgctgc
ctaaaggcagatgtgctgagcgtgtggaggaggagccagcggcagggccgcagggagttg
tggctcttctggtggggtgaagatcctatcttctctgagctcatccactctgagctcaca
ggagaggatgatggtgtgtgggaaagcggcctctcgtacgagtgtcgcacactgcttttc
aaagccatccacaacctgctggaacgctgcctgatgaatcgcagttttgtgcgccttggc
aagtggtttgtcaagccctatgaaaaggacgagaagcctattaacaaaagtgagcacctt
tcctgctccttcagcttctttctgcatggagacagcaatgtgtgcaccagtgtggagatt
aaccagcatcagcctgtgtaccacttaagtgaggagcaccttacactagcccagcaggcg
tccagcccctttcaagtgattttgagtccgtttggcctgaatgggacactgactgggcag
tccttcaaactgtcagacccaccaacgcagaagctcattgaggaatggaagcagttctac
cccatcagtacaagctctaaggagagcacagaggataagatggaggacattgactgggag
gatgactctctggctgccgcagaggtgcttgttggtggtgtgcggatggtgtatcctgca
tgtatggttttggtcccccaggcagatattcccacgataacacctgtggggtcatcacac
tgcactgctgtatattccggtggccaccaagtgcctgcttcaaacagagaccctgccatt
tcctctgtaacactcacccctcccacctcaccagaggaggcccagacagttgactctctc
acagcgcagaagtggatgcggttaccatcagcagtagatggctttagcgtggacagcgca
agtcaccatggaggcaagattccacgcaggatggcgagtcaggtggtggagcgcgtctgg
caggagtgtaacatgaatcgatcgctgaacaaacgcaagttctctgcaacaggcagtggg
accagtgaagaggaggtgatggagaaaatgggatcgtgggattttgttgaatcagtgcag
agaacaacttgcaactgctcaaggcacaaaaccttaaagcagcgagtgggtggcgcacag
ggccagcctgtttcaacagggcaggttcagcagcagcccatcaagcacaaagcaggagaa
aagctagacaaaggggacaaacagcaaaaacgcccgcaaacacctttccaccatcggagc
tccgtctccgatgacatttccatggaagcagatgcctcggcaagccagaggttggctctg
cgtggtcaggaatgtgggcgattcactggcctccaccctgccgaagtttgcactgtgccc
aagccacctctactgcacactggaggcggagcagcgggtggtgctggtgtaccctcagaa
ttagtgggctcccctcagccacctccgcttagccctcatccttgtgatcgggttgaggaa
ggctcagagaccctcaagaacctgtccacaccccacagtcagcatttctaccctactcct
tcagagccttgcctccttccccaaaagggcccagatgatccttgtgctgactctcttgcc
cacccattccacccagcttactctgaggccacggagcccacagtgtatattgggacagca
gtttgcctggagaatgatggaaatcacatgccctggagattcttcaacctccctcgtaga
aaagacttggacttgccaacaccttctttgcctacggacaagctgaaagaggagggcttg
atgggagtgaatggaaacgtgtcaattactgaggtaatggccatctcaaaacatactcta
aaggtatcaggtgagcgtgtccagacctacctgcagcggcgaaatcagcatctagctgca
gccattgctgacagcgaccttgagccagaggtggacccttacgcctttgtggatggggat
gtgaagtttactttctccgataagaaggacaaagcaggcatcgagagagagcaaggaagg
aaacacaaaggggacgatgggggtgctggtacattggatgatgctcaacggggtgcagcc
cacaaaactgcttcctcaaccagtctaatccatgattcagacctgactgtttctttcaaa
gacctggacaacctttttaactctgatgaagacgagcaaacgcctggtgcaagaagagcg
gtgaatggaacagatgataagtttggcagtaaggaaccaaagacagctatgttggaccct
gtgtcatgtattagttcagcagacctaaaccagatatttcccactcctccatctctggaa
ccgcacataatgggctactcacctatgaacatgggtggtaaggaatatggtaacatggag
cctgggccaggcatgacctctctggatggctcatcagctctagttagccagtttaaaatt
gaggtggaggaaagcttctgtagtccaaaaccatctgagatcaaggatttctcgtttgtg
tataagcctgagttgtgtcaggcgtttgtgggctgttccatgtttgcccccctgaaaacc
ctccccagccagtgtctgcctcctatcagacttctggaggagtgtgtctaccggcccagc
tggtctgtgggcaagctggagcttctcaaccccatacctgccatgaactttcttaacagg
gacagtaacattcctagtgtgggcagtgctatggaacaggactacaatcagtcttacaca
ccccagactcacaccccttttatatcaaacagcgcaccccccagcaacagtggcacaggg
attcttccttcccccgccactcctcgtttctctgctcctactccccgcacacctcgtacc
cctcgcaccccacgtggcccatccagcgttcagggctccttaaagtacgagaactcagac
ctgtactcgcctgcctccacgccttccacctgccgcccactcaactctgtggagccagcc
actgttccctccatccctgaagcccacagcctttttgtcacccttatcctgtcagagtca
gtcatgaacctcttcaaagactgcaactttgatagttgctgcatctgtgtgtgcaacatg
aacatcaaaggcgctgacgtgggtgtgtacattaacgaccccaacatggaagcgcagtac
ccatgcagctgtggcttcagtgcggttgtcaatcggcgctacggcaatggatcaggcctc
ttcttggaggatgagctggacatcattggccgtggctcagatgtgagccgcgaggcagag
aaacgcttcgaggcactgagaagcacatctttggaaaagagccctggaggactgcaggac
agaaacccagatgagctgatcttgctcttgcaggatcagtgcaccaacccttttccacca
cttgtggcagcagaaccagagggaacagcctccggggcaccagggagcagtgttgttcct
ccctgtgtacgtgtagaagagagggacttccacaacgactgctacctggctttggaacat
gggcggcaattcatggacaacatgtcaggaggcaaagtggatgaggtgttggtcaaaagt
acctgtctgcatcactgggccaaatgcaatgcagtggatgtgagtgccctgtgctcacaa
gatgtgctgagagtgcttctgtccctccagcctgtgcttcaggatgctatccagaagaaa
aggactgttcgctcatggggtgtccaggggcctctcacgtggcagcagttccacaagatg
gctggaagaggatcctatggcacagatgagtctccagagcctttgcctattcctacattc
ttggtgggctttgagtatgactttgtggtgctgtctccctttggactgccctactgggaa
aagcttttattggagccttttggctcccagagagacatggggtatttagtgctctgccca
gagaacgaagcactaatcaatggcgccaagagttttttcagggagttaacagctgtctat
gagtcttgcaaacttggtcagcatcgaccaatttccaaagtccatgcagatggaattgtg
agagtaggaggggctgcagccaagaagctgtcagagcagccgatctctgattggttcctg
aagggagtttgcagcactactgaagcctttgccaagctcaagctgtttgcccaattctgt
aggcatgaccttgctccataccttgctactcagcccttggacagttccttactcacccag
ccgagtccagcatcttacactactcagactttacctgcacagtcctcaggctcagcctct
tctaaccctcaatcctcactggcttcaggagtctcgtccctcaccagtaatacaggcact
ggcaacgttggccaggggttacaaggcagtaccagtagcatgccctcctcaggcccacag
aacggcagcgtgcagcctagcaagccaagctcttttcctccctttgggggtatgggagtt
cagagcaacagctcacagtctggggctctgggccagcaggctggctcccagagctcaaac
ctctctggagacaactcatccagcagcagtcagactcaagggtcttccgaaccaccagag
agcaccatggagagggaaaaggttggcgtaccaacagatggggaatctcacgcaattgta
tacccccctgccattatgatttacattgttgatactttttcatatgaggatgcagagaca
ggggttgcccactcgagtgtatggacactcggactcctgcgttgttacctggagatggtt
cagttcctccctcctcacatacgcaactccatctcagtgcagattatcccatgtcagtac
ctcctgcagccagtaaagagtgaagagaggcaattgtatgcacagcacctgaaatctctg
gctttctcagtgttctctcagtgccgacggcccctccctgcatccaccaatgtcaaatca
ctaacaggctttgggcctggccttgcacttgacactgccctcaggagcccagagaggcca
gagtgtctgcgcatgtacacgcctcctttcatcttggcaccagtaaaggacaagcaaacc
gagttgggagagacgtttggtgaggcttcgcagaaatacaatgtgctatttgtgggatac
tgcctttcacacgaccagaggtggttgctggccacgtgtacggacatgtacggagaacta
ttggagacgtgcatcatcaacatagatgtccccaacagagcaagaaggaaaaagggctca
gcccggagacttggtttgcaaaagctctgggagtggtgcttgggtttggttcagatgaca
tcagttccatggagagtggtaattggcagactcgggcggataggtcacggagagttgcga
gactggagtatattattgagccgaaggaatctgcagtctcttagccgccggctaaaggac
atgtgcaggatgtgtggtatctcatctgctgacactcctagcatccttagtgcctgtttg
gttgccatggagcctcagggctcatttatcatcatgccagactccgtgtcgactggttct
gtatttggccgcagcacaactctgaacatgcagacgtcacagcttagcacccctcaggac
acctcttgcacacacatcttggtgttccccacctctgcctttgtccaggtcaacagctct
agctacacccccgaggatattgccttcaatcccatcaatgatggatcagatcctatcggt
ggaatctttgaccttttggagcaggaaagtgacctggttgatccagacataatcagtatt
cttcctgcctcccccaccacctccccagtccactctccaggatcacaatatcaccatgga
ggagacggtagcaagggtcagagtacagatcgaatggagtcacatgatgaggctcccaac
atcctgcagcaacctttggctctaggctactttgtatcaacagctaaagcaggtccactg
cctgactggttctggtcagcctgcccacaagctcagaaccagtgcccacttttcttaaag
gcctctcttcacattcatgtatcttcagtgcagtcagatgagcttttgcacggcaaacac
tcccacccactggactccagtcagacctcagatgtacttaggtttgtcttggagcagtac
aacgccctctcctggctgacctgtgaccctgcaacacaagaccgtcgttcatgtctaccc
attcactttgtggtgctgaaccagctctacaatttcatcatgaacatgttgtaa

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