KEGG   Anaplasma marginale Florida: AMF_324
Entry
AMF_324           CDS       T00855                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega subunit (rpoZ)
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
amf  Anaplasma marginale Florida
Pathway
amf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:amf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AMF_324 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amf03021]
    AMF_324 (rpoZ)
   03400 DNA repair and recombination proteins [BR:amf03400]
    AMF_324 (rpoZ)
Enzymes [BR:amf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AMF_324 (rpoZ)
Transcription machinery [BR:amf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AMF_324 (rpoZ)
DNA repair and recombination proteins [BR:amf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AMF_324 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF4007
Other DBs
NCBI-ProteinID: ACM49195
UniProt: B9KI83
LinkDB
Position
complement(398689..399075)
AA seq 128 aa
MREGDSGYFSCYDGNRFRLVILASQRAHELSSGACTAVARKGDKNTVVALREIVGEQLDL
AAVFKLAVNRCRKYLEEFTNAREVAAARSSQAAPKSAPGQEIGKSFREKDPSAAAFLDQE
QFFSGGGE
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcgggaaggtgattctgggtatttctcttgctatgatggcaacagattcaggctggtg
atcttggctagccagagggcgcatgagctaagctccggagcgtgcaccgcggttgcacgt
aagggggacaagaacacagtggtcgcgttgcgcgaaatagtaggcgagcagttagacctt
gctgccgttttcaagctggcagtaaataggtgtagaaaataccttgaagagtttaccaac
gcacgggaggttgcggctgcacgcagcagtcaggcagctcctaaaagtgcgccaggccag
gagataggtaagagcttcagggagaaagatcccagcgccgctgcattccttgatcaggag
caatttttctcaggagggggtgaataa

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