Alteromonas macleodii English Channel 673: AMEC673_03935
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Entry
AMEC673_03935 CDS
T02254
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amg
Alteromonas macleodii English Channel 673
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amg03021
]
AMEC673_03935
Transcription machinery [BR:
amg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMEC673_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_10
HTH_16
DUF6589
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AFT73484
LinkDB
All DBs
Position
914967..915497
Genome browser
AA seq
176 aa
AA seq
DB search
MFNKRDEKLVEQALKGNKKAWFTLISRYETAMYQYGIRMTGNSHDAADLMQEIFISVFRS
LACFKGEGSFKSWLYRIAHCRCVELYRKRKPHSDIDDIQAPLCGAPCPEMQLYSDRESRA
LTQAMQTLPLGQKAVVELKFFGHFTFEEIAQQMDISVNTAKSRLYAALAKLKLELE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaataaacgagatgaaaaactcgtggaacaggcattaaagggtaataaaaaagcg
tggtttacgcttatatctcgctacgaaaccgctatgtatcaatacggtattcgaatgaca
gggaatagccatgatgcagcagatttaatgcaggagatttttatctctgtgtttcgcagt
cttgcttgttttaaaggtgagggcagttttaaaagttggctctatcgcattgcccactgt
cgctgcgttgaactgtatcgcaagcgaaagccgcattctgacattgacgatatacaggcg
ccactttgcggtgcgccatgccctgaaatgcagctttatagcgacagagagagtagagca
ttaacgcaggctatgcagaccctacctttgggccaaaaggcggtggtggaattgaaattc
ttcggccacttcacgttcgaagaaattgcacagcaaatggatatctcagtaaataccgct
aagtcgcgactttacgcagccttagcaaagttgaagttggagttggaataa
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integrated database retrieval system
