Alteromonas mediterranea 615: I633_12335
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Entry
I633_12335 CDS
T02719
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
amh
Alteromonas mediterranea 615
Pathway
amh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I633_12335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amh03400
]
I633_12335
Enzymes [BR:
amh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I633_12335
DNA repair and recombination proteins [BR:
amh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I633_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGP78359
UniProt:
S5AGE2
LinkDB
All DBs
Position
complement(2492454..2496074)
Genome browser
AA seq
1206 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLLRQQPLGVFTPETILVESPGMQHWVSMQMANEHGVAMNID
FPLPVRFMWNTARIVLGADKVPKQSPYRREVLTWRIDNVLQDNALMDSDAFEQVNKYWQS
AGSEQEQGLQRLQLATALADVYEQYLLYRPDWLFKWENNERAVFDDMEVWQSEIWRILAK
DQPLHPARLHQMTLEALEAGNVPAHLPKRVIVFAINTMAPQLIAFFDALAQHIDIHIFHL
NPSVNYWGEAKSSSEQAKLLRLEGLKKWMEEDQSNPLLGNLGKQGRELFNLLTELDTFEI
SAFDSPDFESAGEGEDEHGQCHSRGLLDYIHNDILQAAHPQPLTHQLKNKDDSVTVMCTH
SALREVQVLHDHLLHWLSQDKTRTPSDILVMCPAIENYAPFVDAVFHRVGTKSLGATGQV
RLPCTIADRSPMDAEPLIAAFMALLQLPDSRFGVSDILDYLQLDSVQKRFSVSQDDIEQM
VVWLKQAHIHWGLNSAHKTAVSEGVNLDDTYSWWWGIRRLLMGMLAPDSEMIVSDVLTIP
DVEGQSALTLGKLIEVVALLGEFAQELTQPRPPEQWSKALIALRDACFMPTKDQQQIWDL
IAKVAADLAARCEEANYEHELTLRQVRDLLLNRFSSPDAGNHFMTGQVTVCSMLPMRSIP
FKKVCILGLNDSEFPRKSSPLGLDLMASAGRRVGDRSRRLEDRYLFLEAIISTRESLYLS
YQGNDVTNNSERQPSLVLAEFMDMLENNYALSLEKYAVHAPLHPFSEAVFAGALPSYETG
WLRLADALQHNKFGANVADTNENADVVDTSFDTATADISQSPRALATQALRLSNMQIARA
FKDPLEHFSIQRLGVNLSQSFTLLENSEPFETNALLRYQVLDAIFSSPERNNSSELDASE
LTYSEQVITFASLRGDIPNNPVAMDEVEMWKEGALALSQAMGPHDAEHKKAQFQGKYITF
TTSALEGSDALVELCAGKVDAHRALGFFISQLIFSSSDETTSYTHYPLEIYACSWEKGET
ILKKQKFPAFERETAVQLLLFIEQLYMAIYTAPTPVHLSLFGSIIPGKRNSECKPVVDSI
KPEMFGHLLRALLSADNSCETDKAVIYQVKQAIDEVCPIADNDTVDEASEKAQQIITQAA
GLFDTVELQRSLTDWQQSSGQYSADMANNPYLNWLFPQGINWSDVPHLSAFLLLAMVNNA
SQEEKL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcgctatatccctctaacaaattagaacacttaagttttcttcttactacgctt
ttacgtcaacaacctttaggcgtatttaccccagaaacgatcttggttgaaagcccaggt
atgcagcattgggtaagcatgcagatggctaacgaacacggcgtagctatgaacatcgac
ttcccactgcccgtgcgttttatgtggaatacagcacgcattgtattgggggctgataag
gtaccgaaacaatcgccttatcgccgcgaagtactcacgtggcgtatagataatgttctt
caagataatgcgctaatggatagcgatgcattcgagcaggttaacaaatactggcaaagt
gcaggtagtgaacaagagcaggggctgcagcggcttcagcttgctacggcactggccgac
gtatacgaacaatacttactgtaccgcccagactggttgtttaaatgggaaaataacgag
cgagcggtattcgacgatatggaagtgtggcaaagtgaaatttggcgaattttagcgaaa
gaccagcctttgcatcccgcacgcttacaccaaatgacgctagaagcgctagaagcgggt
aacgtacctgctcatttgcccaagcgcgttattgtttttgccataaacaccatggcgccc
caactcattgcgtttttcgatgcccttgcccagcacatcgatatacatatctttcacctc
aaccccagtgttaactattggggtgaagcaaaaagtagtagtgagcaagccaagctgctt
cgtttagaaggacttaaaaagtggatggaagaagaccaatccaacccactgcttggcaac
ttaggaaagcagggccgagaactgtttaacttactcaccgagctggatacgtttgaaata
agtgcattcgactcgccagatttcgaaagtgcaggtgagggagaggatgaacacggacag
tgtcattccagaggcctgctcgactacattcacaatgatatccttcaggctgctcacccc
cagccactgactcaccaattaaagaacaaagacgacagtgttactgtaatgtgcacccat
tctgcactgcgcgaagttcaagtgttacatgaccacttgctgcactggttgtctcaagac
aaaacccgcacaccctctgacatccttgtgatgtgcccggcgattgagaattacgcgccg
tttgttgatgcagtatttcaccgagtgggtaccaaatctttaggtgctactgggcaggta
cgtcttccttgtactattgctgacagaagccccatggatgcagagccccttattgcagca
ttcatggccttgctacagttaccggatagccgctttggtgtatcggatattttggattac
ttacagctcgactcggttcaaaagcgcttttccgtgtctcaagatgatatagagcaaatg
gtcgtttggttaaagcaggcacacattcattggggcctgaatagcgctcataaaactgcg
gtgtcagaaggcgtaaatttagacgacacctatagctggtggtggggcattcgccgttta
cttatgggcatgcttgcgccagatagcgaaatgatagtgagtgatgtacttaccattccc
gatgtggaagggcaaagcgcgttaacgttaggtaagctcatagaagtggtggcgttactg
ggggaatttgctcaagagttaacccaaccccgaccgccagaacagtggtctaaagcattg
attgcgcttcgtgacgcctgctttatgcctacaaaagatcagcagcaaatctgggatctc
atcgccaaagtcgccgcagaccttgccgcccggtgtgaagaagctaactatgagcacgaa
ttaaccttgcgacaggttcgagatcttttgctcaatcgattttcatctccagatgccgga
aaccactttatgaccggtcaggttaccgtatgctctatgcttccaatgcgaagtataccg
tttaaaaaagtgtgtattttaggcctgaatgacagtgagtttcctcgcaaatcaagcccg
ttagggctcgatttaatggcaagtgctggtcgcagggttggcgatcgctctagacgattg
gaagacaggtacttattcctagaagctattatctcaacccgggaaagcctgtatttaagc
tatcaaggtaacgatgtaacgaataacagcgaacgacagcccagtctcgttttggctgag
ttcatggatatgcttgaaaataactatgcattgtcactagagaaatacgcggttcatgcg
ccgttacatcccttcagtgaagcggtttttgctggggcgttgcccagttatgaaacgggg
tggcttcgcctagccgatgcgcttcagcacaacaaatttggtgctaacgtggctgatacg
aatgaaaacgctgatgttgttgatacctcctttgatacggcgacagctgatattagccag
tcgccccgcgcacttgcaacacaagcgctacgtttgtcgaatatgcaaatcgccagagca
tttaaagatccgcttgagcatttttccatacaaaggcttggcgtgaatttatcgcaatca
tttaccctgcttgagaacagcgagccttttgaaactaatgcattactgcgttatcaggtg
ctcgacgctatattttcatcgcctgagcgcaataattcgtcagaacttgatgccagtgaa
cttacatacagcgagcaagtgattacatttgcttcgcttagaggggatattcccaataac
ccagtggcaatggatgaagttgaaatgtggaaagagggagcgctagcgctaagtcaagct
atgggccctcacgatgccgagcacaaaaaagcacagtttcaaggtaagtatattaccttc
acgacttcggcactagaaggcagcgacgcattagtcgagctttgcgccgggaaagttgac
gctcatcgagcgctaggctttttcatctctcaattgatattttcaagtagcgatgaaaca
actagttacacccattacccattagaaatttacgcctgctcgtgggaaaaaggcgaaact
attctgaaaaaacagaaatttccagcttttgagcgcgagaccgccgttcagttactcctg
tttatagagcagctttacatggctatttacaccgcgccaacccccgtgcatttaagtttg
tttggtagcattatacctggtaagagaaattcagaatgtaaaccagttgtcgacagtata
aaacctgaaatgtttggacacctacttagggcgctattgagtgctgacaattcctgtgaa
accgacaaagcggttatttatcaagtaaagcaggctattgatgaagtctgccccattgca
gataacgacactgtcgatgaagcaagcgaaaaagcacagcaaatcataactcaagcggct
gggcttttcgacacggtagaattacaacggtcgctaaccgattggcagcaaagtagcggg
cagtatagcgctgacatggctaataacccttatcttaactggctatttcctcaaggtatc
aattggagtgatgtgccgcatttaagtgcctttttactactcgccatggtaaacaacgcg
tctcaagaggagaagttatga
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integrated database retrieval system
