Actinosynnema mirum: Amir_4320
Help
Entry
Amir_4320 CDS
T00957
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ami
Actinosynnema mirum
Pathway
ami02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amir_4320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ami02000
]
Amir_4320
Transporters [BR:
ami02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Amir_4320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SepZ
Motif
Other DBs
NCBI-ProteinID:
ACU38172
UniProt:
C6WIT2
LinkDB
All DBs
Position
5085486..5087150
Genome browser
AA seq
554 aa
AA seq
DB search
MNTSRPSPRRRSPRRALRLVAGLVAAAALAACGSGVAARQGGSGEPRQGGDLTFLIDSLG
DTWIPNNSAISSFQGHIWGHVTDKLVYVDENGTTSPWVAREWEQNETATEFTLRLREGVT
FSDGTPLDASAVVANLDVWSKGAPDKGINPIGLFPKTYQRAEAVDATTVKVLFSAPTLGF
VPTLGYHGSILISPKTLALPAEEQADLSNDIGSGPFTVESWKQGDSVVLKKRPDYDWAPE
ALDHSGPARLESITYKIVAEPSLRTAAVRSNQADVAYNPSPQELASFKAQGFTTAAPRYL
GFVSGFAINTKVAPYDDPRVRQALQHGIDRQEIISTVYTEDWLPAKSFFQSTVPGATDRS
ADFAFDAAKSAKLLDEAGWAEGADGLRSKDGKALELTLYPNPYLATSKSVDELVAQQLRE
LGFTVSIQAFDVVTYGERVKFNSPSVAAYEVTRSIIDAGTVAGVLTDANRGENWFGLGQS
DPELVRLSAAVAGSSSTEERAPLLDELQEHVLQQGYFIPLTQIVQRLYVQSPKLQGVTYN
GVAYANYYTAWLGE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacgtcccgcccgtccccccgccgccgatccccccgccgcgccctgcggctcgtc
gcgggcctcgtggccgccgccgcgctggccgcctgcggttccggcgtcgcggcgcggcag
ggcggttcgggtgagccgaggcagggcggggacctgacgttcctgatcgactcgctcggc
gacacctggatccccaacaacagcgccatctccagcttccagggccacatctgggggcac
gtcaccgacaagctcgtctacgtcgacgagaacggcacgaccagcccgtgggtcgcccgc
gagtgggagcagaacgagaccgcgaccgagttcaccctgaggctgcgcgagggcgtcacg
ttctccgacggcacgccgctggacgcgagcgccgtggtcgcgaacctggacgtctggtcg
aagggcgcgccggacaaggggatcaacccgatcggcctgttcccgaagacctaccagcgg
gccgaggcggtggacgccaccacggtcaaggtgctcttctccgcgcccacgctggggttc
gtcccgaccctgggctaccacgggtcgatcctgatctctccgaagacgctggcgctgccc
gccgaggagcaggcggacctgtccaacgacatcggcagcggcccgttcaccgtcgagtcg
tggaagcagggcgacagcgtcgtgctgaagaagcgccccgactacgactgggctccggag
gccctggaccacagcggtccggcgcggttggagtcgatcacgtacaagatcgtggccgag
ccgtcgctgcgcaccgcggccgtgcggtcgaaccaggcggacgtggcgtacaacccgtcg
ccgcaggagctggcctcgttcaaggcgcagggcttcaccaccgcggcgccgcgctacctg
gggttcgtgagcgggttcgcgatcaacaccaaggtcgcgccgtacgacgacccgagggtg
cggcaggcgctccagcacggcatcgaccgccaggagatcatctcgacggtctacaccgag
gactggctgcccgcgaagtcgttcttccagtccaccgtgcccggcgcgaccgaccgcagc
gcggacttcgcgttcgacgcggccaagtccgcgaagctgctcgacgaggccgggtgggcc
gagggcgcggacgggctgaggtccaaggacggcaaggcgctcgagctgacgctgtacccg
aacccgtacctggcgacctcgaagtcggtggacgagctggtggcccagcagctgcgcgag
ctcggcttcacggtgagcatccaggcgttcgacgtggtgacctacggcgagcgggtcaag
ttcaacagccccagcgtggccgcctacgaggtgacccgcagcatcatcgacgcgggcacg
gtcgcgggcgtgctgaccgacgccaaccggggcgagaactggttcgggctcgggcagtcc
gacccggagctggtgcggctgagcgcggcggtcgccgggtcgtccagcaccgaggagcgc
gcgccgctgctcgacgagctgcaggagcacgtgctccagcagggctacttcatcccgctg
acccagatcgtgcagcgcctctacgtgcagtcgccgaagctgcagggcgtgacctacaac
ggggtcgcgtacgccaactactacaccgcctggctgggcgagtga
DBGET
integrated database retrieval system
