Aminobacter sp. MSH1: CO731_01249
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Entry
CO731_01249 CDS
T05420
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CO731_01249 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amih03019
]
CO731_01249 (recQ)
03400 DNA repair and recombination proteins [BR:
amih03400
]
CO731_01249 (recQ)
Enzymes [BR:
amih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO731_01249 (recQ)
Messenger RNA biogenesis [BR:
amih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CO731_01249 (recQ)
DNA repair and recombination proteins [BR:
amih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CO731_01249 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWC21796
UniProt:
A0A2S0XFG0
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All DBs
Position
1282383..1284182
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AA seq
599 aa
AA seq
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MTATALEILKTIYGYDAFRGPQARIVEHVIAGNNAFVLMPTGGGKSLCYQIPAIVRPGMG
LIVSPLLALMADQVSALRQAGVRAAGLNSDLSPDGRRSLWHDIRTGALDLLYVAPETLLR
PDVLELLDGVKLSLIAIDEAHCLSQWGHDFRPSYRQLDAVVSRFAGTPRMALTATADEPT
RAEILSHLEIDETDAFVAGFDRPNIRYAIEEKDNPRAQLKEFLKRYQGESGIVYCLSKRR
TEETAAWLQGLGYDALAYHAGMDKAAREANQMRFQHGEAVIMVATVAFGMGIDKPDVRFV
AHIDLPGSIEAYYQETGRAGRDGLPSDTLMLYGYDDIALRSRFIEESEAPDQRKRMERQK
LDALLGLAETASCRRQVLLSYFGDHSEPCGNCDTCAEPPKLFDGAIAAQKALSCIYRTGE
RFGQAYVVDVLLGVDNERIAQFGHDRISTFGIGTEHDNRTWRAILRQLIALRLIDVDLTG
HGGLSIAPAGRDFLRDKPALMLRVPAPTRAKRGKVALSTAQSSVPDADHELFQALRRKRT
DIARTQNVPPYVIFHDKTLIELAAVRPASRAEMANVPGVGEAKLDRYGPAFLAVIAEHA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgccctcgaaattctcaagaccatttatggctatgatgcgttcagggga
ccgcaggcgcggatcgtcgagcatgtcatcgccggcaacaacgccttcgtgctgatgccg
actggcggcggtaagtcgttgtgctaccagatccccgcaatcgtccgtcccggcatgggg
ctcatcgtttcgccgctgctggcgctgatggccgatcaggtgtcggcactgcgccaagct
ggggtgcgggcggcggggctcaactccgacctttcacccgacgggcgccgcagcctgtgg
cacgatatccgcactggtgcgctcgacctcctctatgtcgcacctgaaaccttgctgcgg
cctgatgtgctggagctgctggacggcgtgaaattgtcgctgatcgccatcgacgaggcg
cattgcctgtcgcagtgggggcacgatttccgtccttcctatcgccagctcgacgcggtc
gtgtcgcgctttgccggcaccccgcgcatggcgctgacggcaaccgcggacgagccgacg
cgcgcggaaatcctgtcgcatctggaaatcgacgagaccgacgccttcgtcgccgggttc
gaccggcccaacattcgctacgccatcgaggaaaaggacaacccgcgcgcccagctcaag
gagttcctcaagcgctaccaaggcgagagcgggatcgtctactgcctgtcgaaacgccgg
accgaggaaaccgccgcctggcttcagggcctcggctacgatgcgctggcctatcacgcc
ggcatggacaaggcggcgcgcgaagccaaccagatgcgcttccagcatggcgaggcggtc
atcatggtcgccaccgtcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtt
gcccatatcgacctgccgggcagcatcgaggcctattatcaggagaccggtcgcgccggg
cgcgacggcctgccgtccgatacgctgatgctttacggctacgacgacatcgcgctgcgc
agccgcttcatcgaggagtcggaggcgcccgaccagcgcaagcgcatggagcggcagaaa
ctcgatgcgctgctggggctggccgagacggcaagctgccgccgccaggtcctgctgtct
tatttcggtgaccatagcgaaccatgcggcaattgcgacacctgcgcggagccgccaaaa
ttgttcgacggcgccattgcggcgcaaaaggcgctgtcgtgcatctaccgcaccggcgag
cgtttcgggcaagcctatgttgtcgacgtgctcttgggcgtcgacaacgagcgcatcgcc
cagttcggccatgaccgcatctccaccttcggcatcggcaccgagcacgacaaccgcacg
tggcgggcgatcctgcgccaactgatcgcgctgcgcctcatcgacgtcgacctcacaggt
catggcggcctgtcgatcgcacctgccggccgcgacttcttgcgcgacaagccggcgctg
atgctgcgcgtaccggcgccaacgcgcgccaaacgcggcaaggttgcgctcagcacggca
cagtcctctgtccccgatgcggaccatgagctgttccaggccctgcggcgcaagcgcacg
gacatagcgcgcacgcagaacgtgccaccctatgtgattttccacgacaagaccctgatc
gagctggcagcggtgcgacccgcgtcgcgcgccgagatggcgaacgtgcccggtgtcggc
gaagccaagctcgaccgctacggccccgccttcctcgcggtgatcgccgagcacgcatga
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