Advenella mimigardefordensis: MIM_c00110
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Entry
MIM_c00110 CDS
T03016
Symbol
ddl1
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim00470
D-Amino acid metabolism
amim00550
Peptidoglycan biosynthesis
amim01100
Metabolic pathways
amim01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MIM_c00110 (ddl1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MIM_c00110 (ddl1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MIM_c00110 (ddl1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amim01011
]
MIM_c00110 (ddl1)
Enzymes [BR:
amim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MIM_c00110 (ddl1)
Peptidoglycan biosynthesis and degradation proteins [BR:
amim01011
]
Precursor biosynthesis
Amino acid ligase
MIM_c00110 (ddl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
GARS_A
RimK
Motif
Other DBs
NCBI-ProteinID:
AHG62114
UniProt:
W0P5I0
LinkDB
All DBs
Position
17978..19081
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AA seq
367 aa
AA seq
DB search
MKKKHVGIIFGGKSAEHEVSLQSAKNILEAIDKTKFDVTLIGIDKNGGWHLNEASSFLLN
AENPELIALNRSGRRVALFPGQHLNQLVESDGAQKFSQLDVIFPVVHGTLGEDGSLQGLM
RIANLPFVGSSVLSSAICMDKDVSKRLLYAAGLNVAPFISVKKHNRKNLSFESVCEQLGL
PLFIKPANLGSSVGVSKVMTQEEFEAALSTAFAFDNKVLIEQAIDGREIECAVLGNERPE
ASLCGEIVTSESFYSYNTKYIESEGAKIVVPAQLSEGTSNHIRSTARKAFEVLECSGMAR
VDFFLTRDEKLIVNEINTLPGFTNISMYPKLWEATGLSYSDLITRLIELAIERHHLESQL
QSSVSRD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaacatgtcggaattatttttggaggaaaatcagctgagcatgaggtttcc
cttcaatcggcgaaaaatatacttgaagccattgataaaacaaagttcgacgtaacgctc
attggcattgataaaaatggcggctggcaccttaatgaagcgtcgagttttttattaaac
gcagaaaatccggagcttatcgctctgaataggtctggcagacgtgtagcacttttcccc
ggacagcatctaaatcaattggtcgaatcagacggtgcccaaaagttttcacaactggat
gttatttttccagttgttcacggcactcttggcgaagatggttctctacagggccttatg
cgtatagctaaccttccgtttgtcggttccagtgtgctcagttctgcaatatgtatggat
aaggacgtatccaaacgtttgctttatgcagctgggcttaatgttgctccctttataagc
gtgaaaaaacacaacagaaagaatttaagcttcgagtctgtatgtgagcagcttgggttg
ccattatttattaagccggctaatctgggttcgtcggtgggagtgagtaaggttatgacg
caggaggagtttgaggcagctctatccacggccttcgcttttgacaataaggttttgata
gagcaggccattgatggcagagagatcgaatgtgccgtgctcggtaatgagagaccggaa
gccagcctgtgcggtgaaatagtaaccagcgagagcttttattcttacaacaccaagtat
atagagtcagaaggtgcaaaaatagtagtccccgctcagcttagcgaggggactagtaat
catatacgtagtaccgcccggaaagcgtttgaagttctggaatgctcagggatggcaagg
gtcgatttctttttaaccagggacgaaaaattaattgtaaatgaaattaatacgttacct
gggttcaccaacataagtatgtatcccaagctatgggaagccaccggcttaagctatagc
gatttgattacacgcctcattgaactggcaattgagcgccatcaccttgaaagtcaactg
caaagctctgtatccagggattga
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