Alligator mississippiensis (American alligator): 102561707
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Entry
102561707 CDS
T03087
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03030
DNA replication
amj03410
Base excision repair
amj03420
Nucleotide excision repair
amj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102561707 (RFC5)
03410 Base excision repair
102561707 (RFC5)
03420 Nucleotide excision repair
102561707 (RFC5)
03430 Mismatch repair
102561707 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102561707 (RFC5)
03036 Chromosome and associated proteins [BR:
amj03036
]
102561707 (RFC5)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102561707 (RFC5)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102561707 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
102561707 (RFC5)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102561707 (RFC5)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102561707 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
102561707 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_22
AAA_11
AAA_24
AAA_assoc_2
AAA_14
RuvB_N
DEAD
ResIII
DUF815
DNA_pol3_delta
AAA_5
AAA_19
ATPase_2
PhoH
TIP49
AAA_7
TniB
AAA_30
nSTAND3
bpMoxR
T2SSE
Mg_chelatase
AAA_3
Thioredoxin_6
AAA_25
AAA_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
102561707
NCBI-ProteinID:
XP_006266471
UniProt:
A0A151N4L9
LinkDB
All DBs
Position
Un
AA seq
336 aa
AA seq
DB search
MEPVAARPPPGKGRNLPWVEKYRPQTLSDLISHQDILSTIQKFISEDRLPHLLLYGPPGT
GKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVIL
DEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP
RLQHVIDEEKVDITNDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEETVYTCTGHPLK
SDIANILDWMLNQDFTMAYKRIMELKTLKGLALHDILTEIHLFVHRVDFPASVRTQLLIK
MADIEYRLAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgtggccgcgcggccgccgccggggaagggccggaacctgccgtgggtggaa
aaatatcgtcctcagacactgagtgacttaatttcccatcaggacattctgagcactatt
cagaagttcatcagtgaagatcgtctgcctcaccttctcctctatggaccaccagggact
ggcaagacctccacaattctggcctgtgctaaacaactctataaagacaaggaattcaac
tccatggttttagagctgaatgcttcagatgaccgaggaattgatatagtcagagggccc
attttaagttttgccagcacaaggacaatctttaaaaaaggttttaagcttgtaatcctg
gatgaagcagatgccatgacccaggatgctcagaacgccctgaggagagtgattgagaag
ttcacggagaacaccaggttttgcctgatctgcaactacctctccaagatcatccctgcc
ctgcagtccaggtgcacaaggttccgatttggccccctgaccccagagctcatggtcccc
cggctgcagcatgttatagatgaggagaaggtggacataaccaatgatgggatgaaagct
ttggtgaccctctctagtggtgacatgcgcagagccctcaatattttgcagagcacaagc
atggcctttgggaaggtgacagaggaaacagtgtacacttgcaccggtcaccccctcaag
tctgacattgccaatattctcgactggatgctgaaccaggacttcaccatggcctacaaa
agaatcatggagctgaagacactgaagggattggcactgcatgacatcctgactgagatc
cacttgtttgtgcaccgagttgacttcccagcctcagtccgaacccagctgctgatcaaa
atggcagacattgagtacaggctggctgctggcacaagtgagaagattcagcttagctcc
cttattgctgcttttcaggtcaccagagacctgattgtggcagaggcttag
DBGET
integrated database retrieval system
