KEGG   Alligator mississippiensis (American alligator): 102570861Help
Entry
102570861         CDS       T03087                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    102570861 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amj03400]
    102570861 (LIG4)
Enzymes [BR:amj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102570861 (LIG4)
DNA repair and recombination proteins [BR:amj03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     102570861 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT BRCT_2 DNA_ligase_IV RNA_ligase mRNA_cap_enzyme Ribosomal_S5_C APG17 Tox-REase-9
Motif
Other DBs
NCBI-GeneID: 102570861
NCBI-ProteinID: XP_006263347
LinkDB All DBs
Position
Un
AA seq 914 aa AA seqDB search
MMSSTPPAQSSSKQTVASQVPFADLCSTLERMQKCKSRPEKTKYFKDFLDSWRKFHGALH
KKEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRT
PAGSRGDAGDFAMTAYFVLKPRCPEQGKLTIEQVNELLDSIASNNAAKRKDLVKKSLLQL
ITRSSALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVS
LTDVSIALFSAFKPMLAAIANIQQIEKQMNNHCFYIETKLDGERMQMHKDGDVYKYFSRN
GYDYTQQFGPSPLEGSLTPFIHNVFKSNIQNCILDGEMMAYNPNTQTFMQKGNKFDIKRM
VEESDLQTCFCVFDVLMVNDQKLGHEILSKRYEILNEVFTPVTGRMHVVHKTRGSTRKEV
VDALNEAIDNREEGIMVKDPTSIYKPDKRGEGWLKIKPEYVTGLMDELDLLIVGGYWGKG
LRGGMMSHFLCAVAEIPTPGGKPSVFHSICRVGSGYTMKELYDLGLKLAKHWKPYHKREP
PCNILCGTEKPEVYIEPCNSVIVQIKAAEIVTSDMYKTDCTLRFPRIEKIREDKEWHECM
TLSMLEQLRGRASGKLASKHLDVANDEPQEKKRKTLPKIKKIIGIAEQFKAPDLSNVSKV
SNVFEDVEFCVLTGTENHSKSDLESKIAECGGNVVQNPGPDTYCIIAGIENVRVKNVISS
NKHDVVRAEWLLQCFQTKMFVPWQPAFMIHMTPDTKLHFAREFDCYGDSYSADIDVAQLK
EVFSRVNNSIDAKMPLEVIGELEERYSWDSHPLSMFRRNTIYLDLYAVVNDPKTKICGTR
LTVRALDLRFYGAKVVSQLKEGVSHVVMGEDRARVKEIKMLRRTFEKKFKILSELWVTDS
IREGKLQSENQYLI
NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt
atgatgtcatccacacctcctgcacagtcatcctctaagcaaactgtagcatcacaagtg
ccttttgcagatctctgttcaactttagaacggatgcagaaatgcaaatcccgcccagag
aaaaccaagtatttcaaggattttttagattcatggaggaagtttcatggtgccctccat
aaaaaggagaaggatgtcacggactctttttatcccgcaatgcgacttattcttccacaa
ctggaaagagaaagaatggcttatggaataaaagaaaccatgcttgctaagctgtatatt
gaactacttaatttacccaaagaaggaaaagatgccctaaagcttttaaattatagaaca
ccagctggttcacgtggagatgctggggactttgcaatgactgcctactttgtattgaaa
cccaggtgcccagagcaaggcaaattgactattgaacaagtgaatgaacttctagattca
attgccagtaataatgctgctaaaagaaaggacctggtaaagaaaagtctccttcaatta
ataactcggagctcagcacttgaacaaaagtggttgatccggatgattataaaggatcta
aaacttggtgtgagtcagcaaactatattttccatttttcatcctgatgctgccgaatta
cacaatgtcacaaccgatctggagaaagtttgcagacagctgcatgacccttctgtatct
ctcactgacgtttccattgctttgttttctgcctttaaaccaatgcttgcagctatagct
aatatccagcaaattgagaagcaaatgaacaaccattgtttctacatagaaactaagcta
gatggtgagcgtatgcagatgcacaaagatggagatgtatacaaatatttttccagaaat
ggatatgattatacccagcagtttggcccatctcccctagaaggttcgttaactccattt
attcataatgtgtttaaaagtaacatacaaaactgcattcttgatggtgaaatgatggct
tataatcccaacacacaaactttcatgcagaagggaaacaaatttgacataaaaagaatg
gtggaggaatctgatctgcaaacttgcttttgcgtgtttgatgtgttaatggttaatgac
cagaagttgggtcatgagatactaagcaaaaggtatgagattctgaatgaggtatttacc
ccagtcacaggcagaatgcatgttgtgcacaaaacacgcggtagtacccggaaagaagtg
gttgatgctctgaatgaagcaatagacaacagggaagaaggaatcatggtaaaagatcct
acgtccatctacaagccggacaaacgcggagagggctggctgaaaatcaaaccagagtat
gtcactggcttgatggatgaattagatcttttaattgttggtggctactggggaaaaggg
ttgcgtggtggcatgatgtctcattttctgtgtgctgttgcagagattcccactcctggt
ggaaagccatctgtttttcactctatttgtcgtgttggttctggctatactatgaaggaa
ctttatgatcttggtctgaagctggctaagcactggaagccttaccataaaagagagccc
ccttgtaacattttatgtgggactgagaaacctgaagtctacattgaaccttgtaactca
gtcatagttcagattaaagcagcagaaattgttactagtgatatgtacaaaactgactgc
actttacgatttcctcgaattgagaaaataagagaggacaaggagtggcatgaatgcatg
actttgagtatgttagagcagctcagaggcagagcgtcagggaagctagcatcaaagcat
cttgatgtagctaatgatgaaccacaagaaaagaaacggaaaactctgccaaagattaag
aaaataattggtattgctgagcagtttaaagcccctgatctttctaatgtaagcaaggtg
tcaaatgtttttgaagatgttgagttttgtgttctgactggaacagaaaaccattcaaaa
tccgaccttgaaagtaaaattgcagaatgtggtggcaatgtagtacagaaccctggaccg
gacacttattgcatcattgcaggaattgagaacgtaagagtgaagaacgttatctcttcc
aataagcatgatgttgtgagagcagagtggcttttacagtgttttcaaaccaaaatgttt
gtaccatggcagcctgcttttatgattcacatgactccagacacaaaactacattttgcc
cgtgaatttgactgttatggtgacagctactcggcagatatagatgtggctcaactaaag
gaagtgttctcaagagtcaataatagtattgatgcaaagatgcctctggaagtaattggt
gaattggaagaacggtactcatgggacagtcatccactcagtatgtttaggcgaaacacc
atatacctggatctttatgctgttgttaatgatcccaagaccaagatctgtggaacaagg
ctaacagttagagctttggacctccgtttttatggagcaaaagttgtctcacagctaaag
gaaggagtgtcccatgtagttatgggagaagatcgtgcccgtgtgaaagaaataaaaatg
cttagaagaacatttgaaaaaaaatttaaaattctatctgaactgtgggtaacagattcc
ataagggaaggaaagctgcagagtgaaaatcaatacttaatttag

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