KEGG   Alligator mississippiensis (American alligator): 102571698Help
Entry
102571698         CDS       T03087                                 

Gene name
WBSCR17
Definition
(RefSeq) Williams-Beuren syndrome chromosome region 17
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj00512  Mucin type O-glycan biosynthesis
amj01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:amj00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    102571698 (WBSCR17)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:amj01003]
    102571698 (WBSCR17)
Enzymes [BR:amj01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     102571698 (WBSCR17)
Glycosyltransferases [BR:amj01003]
 O-Glycan biosynthesis
  Mucin-type
   102571698 (WBSCR17)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 RicinB_lectin_2 Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID: 102571698
NCBI-ProteinID: XP_019349037
UniProt: A0A151N5K5
LinkDB All DBs
Position
Un
AA seq 599 aa AA seqDB search
MASLRRVKVLLALNLLAVAGFVLFLAKCRPIAVKTGDSFHEVHPRAEVANLTAHGGISPL
QDAVLKRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPATLSPEEEEKAKGPHEKYG
YNSYLSEKISLDRSIPDYRPTKCKELKYAKDLPQISIIFIFVNEALSVILRSVHSAVNHT
PAHLLKEIILVDDNSDEEELKAPLEEYVNKRYPGLVKVVRNQKREGLIRARIEGWKAATG
QVTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDNFEVQRYENSAHGYSWEL
WCMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGI
KVWLCGGSMEVLPCSRVAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKSHVYIAWNL
PLENPGIDIGDVSERKALRKSLKCRNFQWYLDHVYPEMRRYNNTIAYGELRNNKAKDVCL
DQGPQENHTAILYPCHGWGPQLARYTKEGFLHLGALGTTTLLPDTRCLVDNMKSRFPQLL
DCDKVKSSLHKRWNFLQNGAILNKGTGRCLEVENRGMSGIDLILRSCTGQRWTIKNFIK
NT seq 1800 nt NT seq  +upstreamnt  +downstreamnt
atggcttctttgcggcgagtcaaagtgctgctggcgctcaacttgctggccgtggctggc
ttcgtcctcttcctagccaagtgcagacccatcgccgtgaagacgggggattccttccac
gaagtccaccccagggccgaggtggccaacttgacagcccacggtggcatcagccctctc
caggatgcggtcctgaaaaggctctcgcttctggaagatatcgtctaccggcagctcaat
ggtttgtctaagtcacttggcctcattgaaggttatggtgggcgtggtaaaggtgggctt
cctgccaccctttcccctgaggaggaggagaaagcaaagggaccccatgagaaatacggc
tataattcctacctcagtgagaaaatttcactggatcgttccatcccagattatcgtcca
accaagtgcaaagagttgaaatatgcaaaggatctgccccaaatttccattatttttatc
tttgtgaacgaagcgctgtcggtgattctgcgatccgtgcacagtgctgttaatcacacc
ccagctcacctcctgaaggagattatccttgtggatgataacagcgatgaagaggaactg
aaagctcccctggaagagtatgtcaacaagcgatacccagggcttgtgaaggtggtgcgc
aaccagaaaagggaaggcctgatccgagctcgtattgaaggctggaaagctgctactggc
caggtcactggattttttgatgcccatgtggaattcactgcaggctgggctgagccagtt
ctttcacggatccaggaaaacaggaaaagagttattcttccctctatcgacaacataaag
caggacaactttgaggtacaacgttatgagaactctgcccatggatacagctgggagttg
tggtgcatgtacattagccctcccaaagactggtgggatgctggggacccttcgctgcca
atcaggaccccagcaatgattggctgctcctttgttgtcaacaggaagttctttggagaa
ataggtcttttggatcctggaatggatgtatatggaggagagaacatagagctgggaatt
aaggtgtggctgtgtggcggcagcatggaggtcctgccgtgctcaagagtggctcacatt
gaacgcaagaagaagccctataacaacaacattggtttctacaccaagcgcaatgccttg
cgtgttgcagaggtgtggatggacgattacaaatcccacgtctacattgcatggaatttg
ccgctagagaatccaggcattgacatcggggatgtatctgagagaaaagctttaaggaaa
agcttaaagtgtaggaatttccagtggtacctggaccatgtttatcctgaaatgagaaga
tacaacaacactattgcatatggggagcttcgtaacaacaaagcaaaagacgtatgcctt
gatcaaggtccacaggagaatcatacagcaatactgtatccgtgccatggctggggacct
cagctggcccgctacaccaaggagggattccttcatctaggggctcttgggactacgact
cttttgcctgacacccgctgcctggtggataacatgaaaagccggttccctcagctcctc
gactgcgacaaggtcaagagcagcctccataagcgctggaatttcttacagaatggtgca
atcctgaataaggggaccggccgctgtctggaagtggagaacagaggaatgtctggcatt
gatctgattcttcgcagctgtacagggcaaaggtggaccattaaaaacttcatcaagtaa

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