Alligator mississippiensis (American alligator): 102572170
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Entry
102572170 CDS
T03087
Symbol
NBN
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03440
Homologous recombination
amj04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102572170 (NBN)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102572170 (NBN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102572170 (NBN)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102572170 (NBN)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
102572170 (NBN)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
102572170 (NBN)
BRCA1-C complex
102572170 (NBN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
102572170
NCBI-ProteinID:
XP_006266756
LinkDB
All DBs
Position
Un
AA seq
765 aa
AA seq
DB search
MWKLVSAAGPGPGEPYRLLVGTEYVVGRKSCAILIQNDQSISRNHAVLMVSPPESNLSQS
VTVPVLTVKDTSKYGTFVNGEKLLSETSRTLKSGDRVNFGVFESKFRIEYEPLIVCSSCL
DVSGKTALNQAILQLGGLVVNEWTEKCTHLAMVSVKVTVKTICALICGRPIIKPDYFVEF
IKSVQAKQQLPTPESFYPPVDEPSIGTEKVDLSMCHERKTIFRGKTFMFLNAKQHKKLSP
SVILGGGEAKLMTEESKDISLLVSPNVCVIDVGLTDTQAPASESARNWINSIITVLQSKD
LRPIPEAEIGLAVIFGSTERYCNPQKQTVKVIKPATPAANLLGSSISQSLIVEETVPTAT
NNDSVYVADTEPEDLTDSRMEIDKTQMNRKGKTNVQDITTVKETPNTSGNANVGILFSRI
DKMPEFDQKSLSLSPFKTSEVGKKRERASQQQLNSIKNYFQTATKKRERKEEEEEVSSEP
KLAKLEDKSLPSSSHTQPITSSTWKSKIEQPQREQYTLDPKTNLLHIDTGIKCATESRKS
ESDKTAAKNISSTKPVSSKRKEQDDLIEETDTLEVVFGSKQLDWEDNVEDPGIEHQANTQ
KKRRLETDENRIEKENVTRNEGSRILENEFGCVLTSEKENKIKQESSMLSHDKLHDDSHS
LPSKLLLTEFRSLVVSHPRPNAQITAKNNYGELKNYKKFKKVAYPGVGQLPHIIGGSDLI
AHNAKRNSELEEWLRQEMEEQNRHEKEESLADDLFRYDPHVKRRR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctggtgtccgcggcagggcctggcccaggagagccgtatcgacttttggtt
ggtacagaatatgttgttggacgcaagagctgtgcaattttaattcagaatgatcagtca
atcagtagaaatcatgcagtactgatggtcagtcctcctgaatctaaccttagtcaatca
gttacagtccctgttttgacagtaaaagatacttctaaatatggtacctttgttaacgga
gaaaaattattgagtgaaacttcaagaactttaaagtcaggtgacagagtcaattttgga
gtcttcgaaagcaagtttagaatagaatatgaacctttgattgtctgctcctcctgttta
gacgtctctggaaaaactgctttaaaccaagccattctgcagcttggaggccttgtagtg
aatgaatggacagaaaaatgcactcacctggctatggtatcagtgaaagttactgtgaag
actatatgcgctctgatttgtggtcgaccaattataaagccagactactttgttgaattc
atcaaatctgttcaggccaagcaacagctgccaacaccagaaagcttttatcctccagtt
gatgagccctctattggcactgaaaaagtggatctgtctatgtgtcatgaaagaaaaacc
atcttcagagggaaaacctttatgttcctaaatgctaagcagcacaagaaactgagtcca
tctgttattcttggagggggagaagcaaaacttatgacagaagagagtaaagacatttct
ttactggtatctcctaatgtttgtgtcattgatgtaggattaacagacacacaggccccg
gcatctgagtctgcaagaaattggattaattctattataacagtgctacaaagcaaggat
ctcaggcctattccagaagcagagattggattagcagttatctttgggtccacagaaaga
tactgtaatcctcaaaagcaaactgtgaaagttataaagccagctactcctgcagcaaat
cttctcggatcctccatttctcaaagtttgatagtagaggaaacagtgcctactgctaca
aataatgactctgtatatgttgctgatacagaaccagaagacctgacagactcacgcatg
gagatagataaaacacaaatgaacagaaaaggcaaaacaaatgtacaggatataactact
gtaaaggagactcccaacacaagtggcaatgcaaatgtagggattttattctccaggatt
gataaaatgcctgagtttgaccaaaaaagcttgtcactctcaccttttaaaacttcagaa
gttggtaaaaaaagagaacgagcatcacagcaacagctgaactcaataaaaaattacttc
cagacagctacaaagaaaagggaaaggaaggaagaagaggaagaagtttcttctgagcct
aaactggcaaagttggaagacaagtcactgccttcttccagtcatacccaacccataact
tcctcaacatggaaaagcaaaatagaacagcctcaaagagagcaatataccctggaccca
aaaacaaatcttttacatatagacacgggtataaagtgtgcaacagaaagtagaaaatca
gagagtgataaaactgctgctaaaaatatttccagtacaaagcctgtatcaagtaagaga
aaagaacaagatgacttaatagaagagacggataccctggaggttgtgtttgggagtaaa
cagctagattgggaagataatgtggaggatcctggtattgagcatcaagccaacacacag
aaaaaaaggcggctggaaactgatgagaacagaattgaaaaagaaaatgtaacaagaaat
gaaggcagtagaatattggaaaatgaatttgggtgtgttctgacttcagaaaaggaaaat
aagatcaagcaagaatcatcaatgttgagccatgacaaacttcatgatgattctcacagt
ttgcccagcaaactcctgttgactgagtttagatcactggttgtcagccatccaagacca
aatgctcaaatcacggcaaaaaacaattatggggaactgaaaaactacaagaaattcaaa
aaggtagcttatcctggagtaggacagcttccacacattattggaggatctgatcttata
gctcataatgccaaaaggaattcagagttagaagaatggttaaggcaggaaatggaggaa
cagaatcggcatgaaaaagaggaatcacttgcagatgatctttttcgatatgatcctcat
gtgaaaaggagaagataa
DBGET
integrated database retrieval system
