Alligator mississippiensis (American alligator): 102573339
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Entry
102573339 CDS
T03087
Symbol
DDX55
Name
(RefSeq) DEAD-box helicase 55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amj03009
]
102573339 (DDX55)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102573339 (DDX55)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
Pre-60S particles
Helicases
102573339 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
102573339
NCBI-ProteinID:
XP_019342268
LinkDB
All DBs
Position
Un
AA seq
597 aa
AA seq
DB search
MEAVTEGTWEALPAPLSPGVLRALRRLRFPRMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPVLEILLRREEKLKKTQVGAIIITPTRELAVQIDEVLSHFTKHFPQFSQILLIGG
TNPVEDIEKFKEHGGNIIVATPGRLEDMFRRKADGLDLARCVKSLDVLVLDEADRLLDMG
FEASINAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPT
RLENYYMICRADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESMVKNAKIMCIH
GKMKHKRNRIFTEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPRSASAFVHRCGRTA
RIGHVGSALVFLLPMEESYVSFLSINQKCPMQEMKPPKNVVDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECSLIFRVKDLDFASLARGFALLRMPKMPELKGKSFSAFIPVSFD
TDTITFKDKNREKQRQKLLEQQRKEKQENEGKKKFIRNKAWSKQKAKKEKKRKMTAKRKR
EEGSDLEDEDLEELLNDTRLLKRLKKGKISEEEFEKRLTGSERKVEMEVVTDSESED
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtcaccgaggggacgtgggaggcgctgcccgcgcccctcagccccggcgtc
ctgcgcgccctgcgccgcctgcgcttcccccgcatgacccccgtgcagtccgcaaccatt
cctctgttcatgagcaacaaggacgtggctgcggaagcggtaacgggcagtggcaaaacg
ctggcgtttgtgattcccgtgctagaaatccttctcagaagagaagaaaagttaaagaaa
acgcaggttggagccataatcatcacgcccacaagagaattagctgttcagattgatgag
gtgctctcacatttcacaaaacattttccccagtttagtcagattctgttaatcggtggt
acgaatcctgtagaagatattgagaagttcaaagaacatggagggaacatcattgtagct
acccctggccgtttggaggatatgttcagaagaaaagcagatgggctggatttagcacgt
tgtgtgaaatcacttgatgtgctggtattagatgaagctgacaggcttctagacatggga
tttgaagcaagcataaatgccattctggactttttgcctaagcagagacggacaggtctg
ttctcagcaactcagactcaagaagttgagaatctggtgagagctggtctccggaatcct
gtccgcatatcagtgaaggagaagggagttgcagcaagcagcacccagaaaacccccaca
cggcttgagaactactacatgatatgcagagcagatgaaaaattcaatcagttggtgcat
tttcttcgacaacacaagcaggaaaaacatctggtctttttcagtacctgcgcctgtgtg
gaatattatgggaaggctctggagtccatggttaaaaatgcgaaaataatgtgcattcat
gggaaaatgaagcacaaacggaacaggattttcacagagtttcgtaaactcccaagtggc
attttagtttgcactgatgtgatggccaggggcatcgacattccagaagtaaattgggtt
ttacagtatgacccccctcgcagtgcaagtgcctttgtgcatcgctgcggtcgaacagct
cgaattggccatgtaggcagcgcgcttgtatttttgcttcccatggaagagtcctatgtt
agttttctctcaataaaccaaaagtgtcccatgcaggaaatgaaaccaccaaaaaacgtg
gtagatcttcttccaaaactgaagtctatggctctggcagacagagcagtatttgagaaa
gggatgaaagcatttgtatcttatgtgcaggcctacgctaaacatgagtgcagtctcatc
ttccgagtaaaagatctggactttgcaagtcttgccagaggttttgctcttttgaggatg
ccaaagatgcccgagttaaaaggaaagtccttttcggcctttattccagtcagttttgac
acggacaccatcacattcaaagacaaaaacagagaaaagcagaggcagaaactgttagaa
caacaaagaaaggaaaaacaagaaaatgaagggaaaaagaaattcatacggaataaagcc
tggtcaaagcagaaagctaagaaggagaagaaaaggaaaatgacagctaaaaggaaaaga
gaagagggttctgaccttgaagatgaagacctggaggagctgctgaatgatacaagactc
ttgaaaagattaaaaaagggtaaaattagtgaggaggagtttgagaagaggctgacgggc
agtgagagaaaagtcgaaatggaagtagtaactgactcagagtctgaagactga
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