KEGG   Alligator mississippiensis (American alligator): 102573364
Entry
102573364         CDS       T03087                                 

Gene name
RELA
Definition
(RefSeq) RELA proto-oncogene, NF-kB subunit
  KO
K04735  transcription factor p65
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04010  MAPK signaling pathway
amj04137  Mitophagy - animal
amj04210  Apoptosis
amj04218  Cellular senescence
amj04620  Toll-like receptor signaling pathway
amj04621  NOD-like receptor signaling pathway
amj04622  RIG-I-like receptor signaling pathway
amj04623  Cytosolic DNA-sensing pathway
amj04625  C-type lectin receptor signaling pathway
amj04920  Adipocytokine signaling pathway
amj05132  Salmonella infection
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102573364 (RELA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    102573364 (RELA)
  09143 Cell growth and death
   04210 Apoptosis
    102573364 (RELA)
   04218 Cellular senescence
    102573364 (RELA)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102573364 (RELA)
   04621 NOD-like receptor signaling pathway
    102573364 (RELA)
   04622 RIG-I-like receptor signaling pathway
    102573364 (RELA)
   04623 Cytosolic DNA-sensing pathway
    102573364 (RELA)
   04625 C-type lectin receptor signaling pathway
    102573364 (RELA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102573364 (RELA)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102573364 (RELA)
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102573364 (RELA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amj03000]
    102573364 (RELA)
Transcription factors [BR:amj03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    102573364 (RELA)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 102573364
NCBI-ProteinID: XP_019350728
LinkDB
Position
Un
AA seq 626 aa
MRLVLGWGVSAAEWPTLGVVVLGRRGRTPEPAMSHPCGAAHGGEWVPYMDTGGAGTPPAT
PRSLTSSCLCLLPDLLPLLLQPDWHMEPVPSSTPFVEIIEQPKQRGMRFRYKCEGRSAGS
IPGERSTDATKTHPTIKINNYTGPGKIRISLVTKDAPYRPHPHELVGKDCKDGYYEAELA
PERNIHSFQNLGIQCVKKRELEEAVAQRIRTNNNPFNVSLEEKGEYDLNAVRLCFQVWVQ
DPAGTGHLMLLPLVVSQPIYDNRAPNTAELKICRVNRNSGSCRGGEEIFLLCDKVQKEDI
EVRFFRDTWEARGSFSQADVHRQVAIVFKTPPYADQALREPVTVHMQLRRPSDREVSEPM
EFRYLPEEGDFHCIEEKRKRTRDTFKSFVQKTPFAAAVSQEPRHPRRIAVPARPAMGAPK
PSSAQPGPSVLPGMGGAPAPLPQPQLKPPSAFPFAAAVPRGPPPLQALPPASMAAMGPPP
VNTFSTVNLEEFSSLGLSPRPPGEAETHLADALLQLQFEGNADGPGGLDLDALVDDVTYT
SLEAINTAEFRQLLQGQPGGGTTEPGPPMLLSYPESITRLVNSQRGAPDGEDPSTSSFVN
GALGDEMLPSMGDLDLSALLSQLGSS
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgcggctggttctggggtggggtgtgtcagcagccgagtggcccactctgggggtggtg
gtgctggggagacggggccgcaccccagagccagccatgtctcacccctgtggggctgca
cacggaggggagtgggttccctacatggacacaggtggggcggggacccccccagcaacc
cccaggtcactaacctcctcttgcctttgtctccttccagatctgctgcctcttctcctc
cagccggactggcacatggagccggtgccgagctcgacgcccttcgtagaaatcatcgag
cagcccaagcagcgcgggatgcgcttccgctacaagtgtgaggggcgttcggccggcagc
atccctggggagcgcagcaccgacgccaccaagacccaccccaccatcaagatcaataac
tacacgggcccggggaagatccgcatctcactggtgaccaaggacgccccgtaccggccg
cacccccacgagctggtgggcaaggactgcaaggacggctactatgaggctgagctggcc
cctgagcgcaacatccacagcttccagaacctgggcatccagtgcgtgaagaaacgggaa
ctggaagaggctgtggcccagcgcatccgcaccaacaacaaccccttcaatgtgtcactg
gaggagaagggcgagtacgacctgaacgccgtgcgcctctgcttccaggtgtgggtgcag
gatccagccggcactgggcacctcatgctcttgcccctcgttgtctcccagcctatctac
gacaaccgggcccccaacacggcggagttgaagatctgccgggtgaatcgtaactcgggg
agctgccgggggggcgaggagatcttcctgctctgcgacaaggtgcagaaggaggacatc
gaggtgcggttcttccgggatacgtgggaggcgcgtggctccttctcgcaggccgacgtg
caccgccaggtcgccatcgtgttcaagacaccgccctacgccgaccaggcgctgcgcgag
cctgtcacggtgcacatgcagctgcggcgcccgtccgaccgcgaggtcagcgagcccatg
gagttccgctacctgcccgaggaaggtgacttccactgcatcgaggagaagcggaagcga
acccgcgacaccttcaagagttttgtgcagaagaccccctttgcagccgcggtgagccag
gagccacggcacccgcggcgcatcgccgtccccgcgcgcccggccatgggggcccccaag
cccagctctgcacagcctggcccgagtgttcttccaggcatgggcggagccccagccccg
ctgccccagccccaactgaagccccccagtgccttccccttcgccgccgctgtaccccgg
ggcccgccgccgctgcaggccctgccccccgcctctatggcagccatgggcccgccccct
gtcaacaccttcagcacagtgaacctggaggagttctccagcctggggctgtcgccgcgg
ccccccggcgaggcggagacccacctggccgacgcgctgctgcagctgcagttcgagggc
aatgcggacgggccggggggcctggacctggacgcgctggtggacgacgtgacctacacc
agcctggaggccatcaacacggccgagtttcggcagctgctgcaggggcagccggggggg
ggcaccacagagcccggcccccccatgctgctctcctaccccgagtccatcacgcgcctg
gtgaacagccagcggggggcgccggacggcgaggacccaagcaccagcagctttgtcaac
ggggcgctgggcgacgagatgctgccctccatgggcgacctggacctgtcagcgctgctc
agccagctcgggtcgtcctag

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