KEGG   Alligator mississippiensis (American alligator): 102574091Help
Entry
102574091         CDS       T03087                                 

Gene name
SETD1B
Definition
(RefSeq) SET domain containing 1B
  KO
K11422  histone-lysine N-methyltransferase SETD1 [EC:2.1.1.43]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:amj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102574091 (SETD1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amj03036]
    102574091 (SETD1B)
Enzymes [BR:amj01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102574091 (SETD1B)
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102574091 (SETD1B)
   HMT complexes
    COMPASS/SET1 complex
     102574091 (SETD1B)
    COMPASS/SET1 complex (yeast)
     102574091 (SETD1B)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: N-SET SET RRM_1 RRM_5
Motif
Other DBs
NCBI-GeneID: 102574091
NCBI-ProteinID: XP_019342408
LinkDB All DBs
Position
Un
AA seq 2008 aa AA seqDB search
MQCLSKRSRQERKPRTLEDPGKKQSSSRSRGMENNAPAGASVEKRNHHWRSYKLIIDPAL
KKGQHKLYRYDGQHFSMPNSGIAPVDCVRDPRIGRIWTKTKELELSVPKFKIDEFYVGPV
PPKQVTFAKLNDNIRENFLTDMCKKYGEVEEVEILYNPKNKKHLGIAKVIFATVKGAREA
VQHLHNTSVMGNIIHVELDTKGETRMRFYGLLVSGLYTPQTLPVGNEQDASPTVNENLQL
TESLKRLKDSNLSSAGSSVTPNSSTPFSHDTAYSSCRQDTPNSYSQYTPQSQGTPLTPRL
GTPFSQDSTYSSRQTTPVYHYGQDSGYKPRRHDTKFTDAYNRRQGHHYVHNSAGVYRGSE
HQFNTYKSHQPEPVQYSHTPSLSHSGSSSYKSAFSPYQAPAVFPQSEEQQFPQTSRDAEY
RRPAPPPAETAAEGSAATNVDFVPVKEKQEEPPPLPESNCVTEQSTASFSQTPERSETPG
TPTMESEMQHNSLDSRIEMLLKEQRTKLPFLNEHDSDNEIRMEGSPISSSSSQLSPIPMY
SSNSQPSYRGQTPSSRPSSTGLEDISPTPLPDSDDDEPILGAPALGQNSRATSEASMTPI
DQLNRTSKPETSETKEMVPGDRSPASEKMDEGQHSSGEDMEISDDEMNSAPITSAECAKT
IVVNSSVNNSAVMAPSIPMPPPGFPPLPPPPPPQPGFPMPPPLPPPPPPTHPAVTVPPPP
LPAPPGVPPPHILPPLPPFHPGMFPVMQVDMISVLGNQWGGMPMSFQMQTQMLSRMMQGQ
NTYQYPPFMGGRMQFVNLPPYRPFSMGAVIGRGQQWPPLPKFDPSVPPPGYEPKKEDPHK
ATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDDWWDKKERLAKASLTPVKSGGEVE
EKPKPKDRITSCLLENWNKGEGLGYEGIGLGIGLRGAIRLPSFKVKRKEPPEAASAGDQK
RIRPSTSIDDEDEESERDRDVPDVSSDLSKGNAEAVGVRRRPARPLELDSEGEEGDETSG
KEEESSSEKEEEPEEEGGLVKAVPSKEEEEEDEDADEEEEEEEEEDDEEAGIEMNEKEEE
PDSEEEDAASPSSSKAEVESSDESEDSSEFESSSDSDEDEEEDEEEEEDEEEEEDEVEEE
AVAEDQDREGMVADTELQPATQEPPDEEKETILELYPVDDYMDATSLGLGEPALVEKPEE
MEEIKPGENECSEVPEASIAAETLVDMEREQEEKLVPSPICVPVGEPEPDAAPEPEALEG
PKPESQGEEESVCPPTPAGAFGEPLPSKSSFFSKSDDSDVEARVKVRVSSAAEEEDRLPR
TPGREATVHSDPDTPILPAHKVPPSTLPLPSTPSKEDPLLPPERFPEQLTVTKTPLEEDI
PRTPGRDISAKSPHVLAKSQSTDTIPVTPGSDGPLTGSSLALSSPQVPGSPFSYPSQSPG
INSGIPRTPGRDFNFTPTFSETGATIPCLLSGKKPSEDELDEKPFKEPPSASLMVSVNSV
PSPIPFASPPNADFHTDLELPPIEVVPGAALPCTPADGKISREDGKAEVKSVLLSPEAPL
IAAAILPPPPPPPSVLPPKRKPGRPKRSPPSVLSLDAYSGRPMDPPPVPVALMESAVSKE
LLGGHPDAFYGLKVPEAVTLDFRNDGFHEKVPPEAVAEKLPFKELENQWNEDFKEEELHA
KPKRQWRRQKKTPEDIPLIPSPEYSPPRPVFRPRSEFEEMTILYDIWNGGIDEEDIKFMC
ITYDRLLQQDNGMDWLNDTLWVYHPPTSFSTPKKKKRDDGMREHVTGCARSEGYYKIDKK
DKLKYLNNSRAFAEEPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLK
FNQLKFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGI
GSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEE
ITYDYKFPIEDVKIPCLCGSENCRGTLN
NT seq 6027 nt NT seq  +upstreamnt  +downstreamnt
atgcaatgtctttcaaagagatccaggcaggagagaaagccgcgcacccttgaagaccca
ggcaaaaaacagagttcaagtcggagccgcggcatggagaacaacgcaccagccggcgct
tctgtcgagaagaggaatcaccattggagaagttacaagttgattattgacccggctctg
aaaaaaggacagcacaaactctatcgttacgatgggcagcattttagcatgcctaactcg
ggaattgccccggtggattgtgtcagagatcccaggataggacggatatggaccaaaacc
aaggagctggagctctctgttcccaaattcaagatcgacgagttctacgtggggccggtg
ccccccaagcaggtcaccttcgccaagctgaatgacaacatccgcgaaaacttcctgacc
gacatgtgcaagaaatacggggaggtggaagaggtggagatcctctacaaccccaagaac
aagaagcacctgggcattgccaaagtgatctttgccaccgtcaagggggcgcgagaagcc
gtccagcacctgcacaacacctcggtcatgggcaacatcatccacgtggagctggacacc
aaaggtgaaacccgcatgcggttctatggcttgctggtgagcggtctttacactcctcag
acccttcccgtaggcaacgaacaggatgcctcgcccacggtgaatgaaaatctgcagctg
acggagtctctaaaacgcctgaaagacagtaacctttcttctgcgggatcatccgtcacc
ccaaacagtagcaccccgttttcccatgacacagcctattccagctgtcggcaagacacc
ccaaactcatacagccaatataccccccagtcccaaggcaccccccttaccccgcggctg
gggactccgttttcccaagactcaacctattccagtcgtcaaacgacaccggtgtaccat
tacggacaggactctgggtataaacccaggagacacgacacaaaatttacagatgcctac
aatagacggcaaggacatcactatgtccataactcggcaggtgtttacagagggtcggag
catcagtttaacacatacaaatctcatcagccagagccagtacaatattctcacactcct
tccttgagccattctggctcttcgagttacaaatctgccttctctccgtaccaagcgccg
gctgtatttcctcagtccgaggagcagcagtttccccagacttccagagatgctgagtac
cgaagacccgcgccaccgccggctgagacggcggcagagggtagcgctgctaccaacgtt
gattttgtccctgtgaaagaaaagcaggaggaacccccgcccctgccagaatccaactgt
gttactgagcaaagcacggcgtccttctctcagactccagagcggagcgagacgcctggc
acccccaccatggagtctgaaatgcagcataacagtttagactcaaggatcgagatgctc
ttgaaggagcagagaacaaagttacctttcctcaacgaacacgactcggacaatgagatc
cgcatggaaggcagccccatctcctcctcctcctcccagctctccccaatccccatgtat
agttccaactcccagcccagttaccgaggccagacaccgtcctcgcgcccctccagcact
ggcttggaggatattagtcccacgccattaccagactccgatgacgatgagcccatcctt
ggggcacctgctctgggccagaattcaagggcaacgtcagaggccagtatgactcctatc
gatcagctgaataggacgtccaaacctgagacctctgaaaccaaggaaatggtgcctggt
gaccggagtccagcgtcagaaaaaatggatgagggtcagcattcgtcaggggaggacatg
gaaatatccgacgacgaaatgaattctgcaccgatcaccagtgcagagtgtgccaaaacc
atcgtggtgaactcctcggtcaacaactcggctgtgatggctccctcgatacccatgccc
ccgccggggttcccgcctcttccgcccccgcccccgccccagccaggctttccaatgcca
ccgcctctgccaccgccgcctccacccactcacccggcggtcaccgtccctccacctcct
ctccccgcaccgcctggggtccccccaccccacatcttgcctccccttcctccgttccac
ccgggcatgtttcccgtcatgcaggtggatatgataagcgtcttgggcaaccagtggggc
ggcatgcccatgtcctttcagatgcaaactcagatgctgagccggatgatgcagggccag
aacacctaccagtacccaccgttcatggggggccggatgcagtttgtgaatcttcctccc
taccgccccttctccatgggggcagtcattggccgcgggcagcagtggcccccgttgccc
aagtttgacccctccgttcccccgccgggttacgagccaaagaaggaagacccgcacaaa
gctaccgtggacggcgtcctcttggtgattgtgaaagaactgaaagcaatcatgaaaagg
gacttgaaccgcaagatggtcgaggtggtggcgttcagggcgttcgatgactggtgggac
aagaaagaacgtctggcgaaggcatcgctcactccagtgaagtcgggaggagaagtggag
gagaaaccaaagccgaaggatcggatcacgtcctgtctcttggagaactggaacaaagga
gaagggctgggctacgagggaattggcctgggcattgggttgcgaggggccatccgcctg
ccgtctttcaaggtgaagagaaaggagccgcccgaagctgcctcagcaggggatcagaag
aggatcagaccctccacttccattgacgatgaagatgaagaatctgaaagggacagagac
gtgcccgacgtgtcttccgacctgtccaagggcaacgcggaagcggttggagttaggcgg
cggccagcaagaccactggagctggacagcgagggggaggaaggcgatgagacttcgggc
aaagaagaagaatcctcatcagaaaaggaagaggagccggaggaagagggaggactggtg
aaagcagtgcctagcaaggaggaggaggaagaggatgaagatgctgatgaggaggaagag
gaggaggaggaggaggatgatgaagaagcaggcatagaaatgaatgaaaaggaagaggag
ccagactctgaggaagaagatgcagcgagtccctcatcctccaaagcggaagtcgagtca
tccgacgaaagcgaggactcctcggaatttgagtccagttctgattctgatgaagacgag
gaggaagacgaggaggaggaggaagatgaggaggaagaggaagatgaggtggaagaggag
gcagtggctgaagaccaagacagagaaggcatggtggctgacaccgagcttcagcctgcc
actcaagagccacccgatgaagaaaaagagaccatcctggagctgtatccggtggatgac
tacatggatgcaaccagcctgggactcggggaaccagccctggtcgaaaaaccagaagaa
atggaagaaatcaagccaggagaaaatgagtgtagtgaagtgccggaagcatctatcgct
gctgaaactctggtggatatggagcgagagcaggaggaaaagctcgtgccgtccccgatc
tgcgtgccagtgggggagcctgagccagacgctgcgccagagcccgaagcactcgagggt
ccaaagcctgaatctcaaggtgaagaagagagcgtctgtcccccgacaccagcgggagcg
tttggagagcccctgcccagcaagagcagcttcttcagcaagtccgacgacagcgatgta
gaagcgcgagttaaggtgagagtttcctctgccgcagaggaagaggacagactgcctcgg
actcctggacgggaggcgacggtccattcggatcctgatactcccatacttcccgctcac
aaggtgccaccctcgacgcttcccctgccatccacgcccagcaaagaggatcctttgctc
cctccagagaggttcccagaacagctaactgtgaccaaaacacccctggaagaggatatc
cccaggacacccgggcgggacatttcagccaagtctccgcacgtccttgcaaagtcgcag
agtactgacactattccagtcacccccggaagcgacggtccgctcacagggagcagcctg
gccttaagttccccccaggtcccagggagccccttttcctacccatcccagtctcctggg
atcaacagtggcattcctcgaactcccgggagggattttaacttcacacccacgttctcc
gagaccggtgctaccattccttgcctgttgtctggcaagaagccatccgaggatgagcta
gatgagaaacctttcaaagaacctcctagtgcttccttaatggtcagcgtgaacagtgtc
ccttcccccattccctttgccagccctcccaacgcagatttccacacagacctcgagttg
ccacccatcgaggtggtgccgggggcagctctgccatgcacaccagcagacgggaagata
tccagagaggacggcaaggcagaagtgaaatcagttttgctctcgccggaagcacctctc
attgctgctgctattcttcctccccctcctcctcctccttccgttctgccccccaaaagg
aaaccgggtcggccgaaacgatcgcccccctctgtcctttcgctggatgcctattctggc
agacccatggatcctcctcctgtcccagtggccttgatggaaagtgccgtgagcaaagag
ctgctgggcggacatcccgatgctttttatgggttgaaagttcccgaagcggtcaccctg
gacttcaggaatgacggcttccacgagaaggtgcccccggaggccgtagccgagaaactc
ccgtttaaggaactggagaaccagtggaacgaggatttcaaagaagaagagcttcacgcg
aaacctaaaagacagtggcgaaggcagaagaagacacctgaggacatcccacttattcct
tccccggagtattccccaccccggcctgtcttcaggccccgctccgagtttgaggagatg
accattttgtatgatatttggaacgggggaatagacgaagaggatatcaagttcatgtgc
atcacgtacgaccgcttgttgcagcaagataatggtatggactggctcaacgataccctg
tgggtataccaccctcctaccagcttttccaccccgaagaagaagaagcgggacgatggg
atgcgggagcacgttaccggctgtgcacgaagcgaaggctattacaaaatcgataagaag
gacaaacttaaatacctcaacaacagccgtgcgttcgcagaggagccaccagctgatacg
cagggaatgagcatccctgctcagcctcacgcttccacccgggctggctccgagaggagg
tcggagcagcgcaggcttctctcgtctttcaccgggagctgtgacagcgacctactcaaa
tttaaccagctcaagttccggaagaaaaaactaaaattctgcaagagccacattcacgac
tggggactttttgctatggagcccatcgcagccgatgagatggtgattgaatacgtgggc
cagaacatcagacaggtcattgctgacatgcgagagaaacgatatgaagacgaaggcatt
gggagcagctacatgttcagggtcgaccatgacaccatcatcgatgccacaaaatgtgga
aactttgccaggtttattaatcacagctgcaacccaaactgctacgctaaagtcatcacc
gtggagtcccagaagaagattgtcatctactcgaagcagcacatcaacgtgaatgaggaa
attacctacgactacaagtttccgatcgaggacgtaaaaatcccgtgtttgtgtggctct
gagaactgcagagggaccctgaactag

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