Alligator mississippiensis (American alligator): 102574972
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Entry
102574972 CDS
T03087
Symbol
RAB5C
Name
(RefSeq) RAB5C, member RAS oncogene family
KO
K07889
Ras-related protein Rab-5C
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04137
Mitophagy - animal
amj04144
Endocytosis
amj04145
Phagosome
amj04148
Efferocytosis
amj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102574972 (RAB5C)
04145 Phagosome
102574972 (RAB5C)
04137 Mitophagy - animal
102574972 (RAB5C)
04148 Efferocytosis
102574972 (RAB5C)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102574972 (RAB5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102574972 (RAB5C)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102574972 (RAB5C)
04031 GTP-binding proteins [BR:
amj04031
]
102574972 (RAB5C)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
102574972 (RAB5C)
Endosome - Lysosome transport
102574972 (RAB5C)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102574972 (RAB5C)
Exosomal proteins of other body fluids (saliva and urine)
102574972 (RAB5C)
Exosomal proteins of colorectal cancer cells
102574972 (RAB5C)
Exosomal proteins of bladder cancer cells
102574972 (RAB5C)
GTP-binding proteins [BR:
amj04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
102574972 (RAB5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
102574972
NCBI-ProteinID:
XP_006264619
LinkDB
All DBs
Position
Un
AA seq
216 aa
AA seq
DB search
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLASKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGAPGRNRGVDLQENSQPSKSQCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggtggagctgctcgaccaaatggaccagctgctggaaataaaatctgc
cagttcaaacttgttctcttgggggagtctgcagtggggaaatcaagccttgttctgcgc
tttgtgaagggacagttccacgaataccaggaaagcacaattggagctgccttcctgacg
cagacggtctgtttggatgacacaactgtaaagtttgagatatgggacacggcaggacaa
gaaagatatcacagtttggcaccaatgtattacagaggcgcacaagcagccatcgttgtc
tatgacatcactaacacagacacatttgtacgagccaagaactgggtgaaagaattgcag
aggcaggccagccccaatattgtaattgcattagcaggtaacaaggcggaccttgccagc
aagagagctgttgacttccaagatgcccagacgtacgcagatgacaatagcttgctgttc
atggagacatcagcaaagactgcaatgaatgtgaacgaaatattcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtgcccctggcaggaatcggggtgtt
gaccttcaagagaacagccagcctagtaagagccagtgttgcagcaattga
DBGET
integrated database retrieval system