KEGG   Alligator mississippiensis (American alligator): 102575637Help
Entry
102575637         CDS       T03087                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:amj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102575637 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amj03036]
    102575637 (SETDB1)
Enzymes [BR:amj01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102575637 (SETDB1)
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102575637 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102575637 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 102575637
NCBI-ProteinID: XP_014451583
UniProt: A0A151M5E2
LinkDB All DBs
Position
Un
AA seq 1347 aa AA seqDB search
MRAGAAEVFPPESACVVLSPAFAAASRGEVWSARATVAGSGVGAPQCSALERSPALASRV
AGSEMDSQEIGELQQEVMEELGISMEDLQQFIDEELEKLECVKQRKKQLEELEKNVKQKE
AEVAHVDQLFDDASRAINKCEVLVKDLYSKLGLQYRESSSEDEDSASKPTEVIEIPDEDD
DDVMSVDSGDTSKNPKDQTLLREAMAAMRKSAQDVQKFMDAITKKKTTQETQRDGVSSQQ
SSVNASQQANSGGDLSKDGDLTVGMRILGKKRTKTWHKGTLIAIQSVGESRRPGGAGKKY
KVKFDNKGKSLLSGNHIAYDYHPLPEKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNK
LRFLIFFDDGYASYVTQPELYLVCRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKS
GQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQE
KKQSGQARTRPNVGAVRSKGPVVQYTQDLTGTGTQYKPIEQMQATVLGSQPVSPQPAEIE
GSDSQLAQSRKQVAKKSTSFRPGSVGSGQSSPASPVLSETPPIGRTGVNQQVYRFPSTSL
PSQPISGVAPSFHGIMDRVPNEPSYHAPMEKLFYLPHVCSFTCLSRVRPIRSDQYRSKNP
LLIPLLYDFRRMTARRRINRKMGFHVLYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFC
LDPYVLVDRKFQPYKPFYYIADITKGKEDVPLSCVNEIDSTPPPQVAYSKERIPGKGVYI
NTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINHNSGYQYKRLDECLPTGVY
ECNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTD
DFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKDDDDDNTGSEEQE
ESNEDSSDDNFGKDEDFSTNSVWRSYATRRQTRGQKENGLSETASKDSGLARQVSHEESA
VAVSCKLPVSEETSKNKVASWLNSNSMTDSFQDNDSASSFKMNEAGEAKAGKMDAPGERE
RASTSGLGGLDAEGKGQKKEESEETNKFPLLSETTGRLYGYNPSPPKLEGVRRPLSKTTL
HQSRRQSAPPQPSTDDVLTLSSSTDSEGENGQTASGQAQGNANDSDDIQTISSGSEEEDD
KKNPSSGLGPVKRQVAVKSTRGFALKSTHGIAIKSTNLASADKGESAPVRRTTRQFYDGE
ESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWD
YNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 4044 nt NT seq  +upstreamnt  +downstreamnt
atgcgcgctggcgccgcggaggtatttccgcccgagagtgcctgtgtagtgctgtcccct
gctttcgcggccgcctctcgaggggaggtttggtccgctcgggccaccgtcgccggaagt
ggtgtcggggcccctcagtgcagcgccctggaaaggagcccggccctcgccagccgcgtt
gcagggagcgaaatggattcccaggagattggagagctgcagcaggaagtgatggaggag
ctgggcatctccatggaagatctccagcagttcattgacgaggagctggagaaactcgag
tgcgtgaagcaacgaaagaagcagctggaagagctggaaaagaacgttaagcagaaagag
gcagaagtagctcacgtggaccagctctttgatgacgcctcaagagccatcaataaatgt
gaggtgctggtaaaagatctctactccaagctagggcttcagtatcgtgagagcagctct
gaagatgaggactcggcttccaagcccacggaagtgattgaaattccagacgaggatgat
gatgatgtcatgagcgtggattcaggtgatacaagtaaaaacccgaaggatcagactctg
cttcgagaagccatggccgcgatgaggaaatctgcccaggatgttcagaaattcatggat
gccattaccaaaaaaaaaaccacccaggaaacgcagagagatggggtttcctctcagcag
agctcagtaaatgcatcccagcaagcaaactctgggggcgatctcagcaaggatggtgat
ctcacagttggcatgcgcatcctgggcaagaaaaggaccaagacatggcacaagggaacc
ctgattgcaatccaatcagtgggcgagtcccgccgccctgggggtgctggcaagaagtat
aaagtgaagtttgacaacaaagggaagagtttgctttctggcaatcacattgcttatgac
tatcacccccttcccgagaagctgtatgttggaagccgggtcgtggccaaatataaggat
ggaaatcaagtctggttgtatgctggcatcgtggctgaaactcccaatgtgaagaacaaa
ttgaggtttcttatcttctttgatgacggctatgcttcctacgtcacccagccagagctg
tacctggtctgcaggccgttgaagaagacctgggaagatattgaggacgtttcctgccgg
gatttcattgaggagtacatcacggcctaccccaaccgccccatggttctgctgaagagc
ggccagctgattaaaacagagtgggaagggacatggtggaaatccagagtggaggaagtg
gatggcagcttggtcaaaatcctcttcttggatgacaagcgctgcgagtggatttaccgc
ggctccacacgcctcgaacccatgttcagcatgaaaacctccacagcctccactcaggaa
aagaagcagagcgggcaggcgaggacgcggcccaatgtcggtgctgtgcggagtaagggg
cctgttgtacaatacacccaagacctgacaggaaccggcactcagtataagcccatagaa
cagatgcaggcgacagtgttgggctctcagcctgtttctccacagcctgctgagattgaa
ggctctgacagtcagctggctcaatctaggaagcaagtggccaaaaaaagcacttccttc
cgtcctggctcggtggggtccgggcagtcatctcctgcttctcctgtcttaagcgagact
ccccccattggaagaaccggagtgaaccagcaagtctaccggttcccaagcacatctctt
ccgtcgcagccaatcagcggggtggcaccatcattccatggcataatggaccgggtgccc
aacgagccctcgtaccatgcccccatggagaagctcttctacctgccccatgtgtgcagc
ttcacctgcttgtcgcgtgtccgccccatccgcagtgaccagtaccgcagcaagaaccct
ctgctcatcccacttctctatgacttccggcgcatgacggcccggcgccgcatcaaccgc
aagatgggctttcacgtcttgtacaagacaccgtgtgggctctgcctccgcaccatgcaa
gagattgagcgctacctgtttgagacagactgtgacttcctcttcctggagatgttttgc
ctggacccttacgtgctggtggaccgcaagttccagccctacaagcctttctactacatt
gctgacatcaccaagggcaaggaggacgtgcccctgtcctgtgtcaatgagatagacagc
acaccacccccacaggtggcttacagcaaggaacgcatccctgggaagggtgtctatatc
aacaccagctgggagttccttgtcggctgcgactgcaaagatggctgcagggacaaatcc
aaatgtgcctgtcaccagctgacagtccaagcgacaggctgcactcctggtgggcaaatc
aatcataattcaggctaccagtacaagcggctggacgaatgcctccccacaggggtctat
gagtgcaacaagagatgcaaatgcaacgtcaacatgtgcaccaaccgcctggtgcagcat
gggctccaggtccggctccagctcttcaagacacagaacaaaggctgggggatccgctgc
ctggatgacattgctaagggctcttttgtctgcatctacgcagggaaaatcctgacagat
gacttcgctgacaaggaagggctggagatgggtgatgagtactttgccaacctggaccac
attgagagcgtggagaactttaaggagggctatgagagcgatgccaaatgctcttctgac
agcagcggcgtggacctgaaggatgatgatgatgacaacacgggctcagaggagcaggag
gagtccaacgaagacagctctgatgacaactttggcaaggacgaagacttcagcaccaac
tcggtgtggcgcagctatgccactcgccgccagacccgaggacagaaggagaatggcctc
tcagagacagcttccaaggactcgggccttgcccggcaggtgagtcacgaggagagcgcc
gtggcagtctcctgtaagctgcccgtgtccgaagagacctccaagaacaaagtggcttcg
tggctgaactccaacagtatgactgacagcttccaggacaacgacagcgcatcctccttc
aagatgaacgaggctggggaggcaaaggccggcaagatggatgccccaggcgaaagggag
cgagcttccacctcagggcttgggggcttggatgcagaagggaagggacagaagaaggag
gaatcagaagaaacaaacaagttcccactgctgagcgagacgacaggcaggctgtacggc
tataaccccagcccaccgaagctggagggtgtccgcaggcccctgagcaagaccaccctg
catcagagcaggcggcagtcggcccccccgcagccctccactgacgacgtattgacgctc
tccagcagcactgacagtgagggggagaatgggcagacagcctcgggacaagcacaaggc
aatgccaatgacagcgatgacatccagaccatctcctccggctcggaggaagaagacgat
aaaaagaacccctcttctggcctcggtcctgtgaagagacaagtggcagtgaagtctacc
aggggctttgccctcaagtcaacacatggcattgctataaagtcaaccaaccttgcatcg
gctgacaagggtgagagtgcgccggtgcgaaggaccacccgccagttctatgacggggag
gaatcctgctacatcattgatgctaagcttgaaggaaacctcggccgctaccttaaccat
agctgtagccctaacctgtttgtgcagaacgtctttgtggacacccacgatctccgcttc
ccctgggtcgccttcttcgccagcaagaggatacgagctggcacggagctgacatgggac
tacaactacgaggtgggcagcgtggagggcaaggagcttctgtgctgctgcggggctatc
gaatgccgaggccggttgctgtga

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