KEGG   Alligator mississippiensis (American alligator): 102576351Help
Entry
102576351         CDS       T03087                                 

Gene name
SETDB2
Definition
(RefSeq) SET domain bifurcated 2
  KO
K18494  histone-lysine N-methyltransferase SETDB2 [EC:2.1.1.43]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:amj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102576351 (SETDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amj03036]
    102576351 (SETDB2)
Enzymes [BR:amj01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102576351 (SETDB2)
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102576351 (SETDB2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102576351 (SETDB2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET zf-HC5HC2H Pre-SET zf-HC5HC2H_2 MBD
Motif
Other DBs
NCBI-GeneID: 102576351
NCBI-ProteinID: XP_019355971
LinkDB All DBs
Position
Un
AA seq 1148 aa AA seqDB search
MHDTCVQLLQRMEQTKSDLQTVWREMEDERVDFIFEQMQNLLLSLKQKIKDGSATSKECF
QACMLLKEANLSNLFTSTNVNNVTDEDTMQKSESRLQPSESNGNRTDTEDSSLFPKTEAQ
KVERSMKTHLPFCAGLSRIVNMEEKEKSCSENEEAANEIVELPLTLPYQNHNCSNACLSN
RPLNSYKSENPLKIPILCQFQRRHAKADCLSKSHDVNYKAPCGKSLRNFEEVQNYLLETE
CDFLSVDYFSFNTYVQLGRNTVNQEPLVFDFDISNGAEVVPISFCNDIDRTRLPFFKYRK
ASWPRGYYLNNFSSTFVDSCDCTDGCTDRLKCACLQLTARGFSESSMSPNKVLCGYKHKR
LEMPITSGIYECNVSCRCNRMLCQNRVVQHGIQVRLQVFNTEKKGWGVRCLDDIDKGTFV
CTYSGRLMSRAESQETGDANHEDNEQDAESGRSHSSLPKKRRGDAACSDSEIELVQTGKG
ALHAEYEPLTQPLDAENKPPDLLPSLYRLQNNGCNPNNLINSGVRRPKARIDFLHNHQPE
LGVDTLAHDATSDEGSSLSQQSTKLKPTTGTKRRKGKLNLRQELEDLEETMQVESAVSLG
AKCKERTSPQDLAHGKLVTQGDAYAVKKDRALLHKSEFKEEKCKSSKQDPFCHETLLKNS
DQENIYLLDATKEGNVGRFLNHSCCPNLFVQSVFVETHNKNFPWVAFFTNRHVKSGTELT
WDYGYEAGSMPETEIPCQCGVQKCRKKILSPPPLGHAHFRVLAPLSRCLGAAVGSPVSCL
YGSAGSEWFRPPRNSLQDPVCADVTSLAKNVLRYTCQLLLQWLITKLCWIQVEKWLALEM
LVTSQIMAKMVRRRCAFCPEGEECSIMYISEEQNLAVHQDCLLYSSGFVESEEYNPDNLD
IRFDVASVLNEIKRGKRLMCNFCRKKGATVGCEERACRRSYHYFCALCDDAAIETDEVKG
IYRVFCPKHDPGNRNNHYGKVSSQTTALDSTVWGGDAVSRRRRQSMISSTIREAMSTEET
AEENSLRVLRNNNRHKVRIDFLRKCKRAGLLDDIFEAMLDTLHLAQEKLMDDNTSETEYE
ETVTSLFECGLFENILTNAHSGTEEKIQELLETRKRLDTQIELLQELKEEVVLPVQENRA
SASSSVSE
NT seq 3447 nt NT seq  +upstreamnt  +downstreamnt
atgcatgatacgtgtgtacaactactccaaaggatggaacaaactaaaagtgacttacag
acggtttggagggagatggaagatgaaagagtggactttatatttgagcagatgcaaaac
ctgttgctgtctctgaaacaaaagatcaaagatggaagtgcaacaagcaaagagtgcttc
caagcttgcatgctgttgaaagaggctaatctaagtaatcttttcacatcaacaaatgta
aacaatgtgactgatgaagataccatgcagaaaagcgaatctagattacagccttctgaa
tcaaatggaaatagaacagatacagaagacagttctctcttccctaagactgaggcacag
aaagtggagaggagcatgaagacacacctacctttttgtgcagggttgagtagaattgtg
aacatggaagagaaggaaaagtcatgttcagagaatgaagaggcagctaatgaaatcgtg
gagttacctttaacattgccttatcagaatcacaattgctctaatgcgtgtctttccaat
agaccactgaactcctacaagagtgaaaacccccttaagataccaatcctgtgtcagttc
caaagacgacatgcaaaagcagactgtctttccaagtcacatgatgtgaattataaagcc
ccctgtgggaagagtctgagaaattttgaagaggtgcagaattacctgcttgaaacagag
tgtgacttcttatctgttgattacttttccttcaacacatatgtacagctgggcaggaac
actgtaaaccaagaaccacttgtatttgattttgatatcagcaatggagctgaggtggtg
cccatttccttctgcaatgacattgaccgtacaagattacctttctttaaatacagaaag
gcatcatggccacgtggatactatctgaacaacttttccagcacgtttgttgattcatgc
gactgtacagatggctgcacagataggttaaaatgtgcatgcctacagctgactgcaaga
ggctttagtgaaagttccatgtcgccaaataaagtactttgtggatataagcataaaaga
ctggagatgcccattactagtggaatttacgaatgtaacgtatcatgcaggtgtaaccga
atgttgtgtcagaacagagtagtacagcatggcatccaggttcggttacaagtgtttaac
acagaaaagaaaggctggggagtccgctgccttgatgatattgacaaaggaacatttgtt
tgcacttactcaggcaggctgatgagcagagctgaatctcaggaaacaggtgatgctaat
catgaggataatgaacaagatgccgagagtggcagaagtcacagctcacttccaaagaaa
agaagaggggatgctgcttgttcagattctgagattgagcttgtgcagactggtaaaggt
gctcttcatgcggagtatgaacctttgactcaacctttagatgctgaaaacaaaccacct
gatcttttgccatctctgtacagacttcagaataatggatgtaatccaaataatttgatc
aactctggtgttagaagacctaaagccagaatagattttctccacaatcaccagccagaa
ctgggagttgatacactggcacatgatgccacctcggatgaaggtagctctttatcccag
cagtcaaccaaattgaaaccaaccactggaaccaagagaagaaaaggaaaactaaacctg
cgacaggagctagaggatctggaggagaccatgcaggttgaatctgctgtcagccttggt
gcaaagtgcaaagagaggacatctccacaggatcttgcacatggtaaattggtcacgcaa
ggtgatgcttatgctgtgaaaaaggacagggctctactccataagagtgagttcaaagaa
gaaaaatgtaagagctccaaacaagatcctttttgtcatgagacgcttctgaagaattct
gatcaagaaaacatttatttgttggatgccacaaaagaaggaaatgtgggtcgatttctt
aatcatagctgctgcccaaatctctttgtgcaaagtgtctttgtagagactcacaacaag
aatttcccctgggtggcattcttcacaaacaggcacgtgaaaagtggaactgaactcacg
tgggattatggttatgaagctggaagcatgccagagactgagatcccctgtcagtgtggc
gttcagaagtgcaggaaaaaaattttatctccgcccccacttgggcacgcccacttccgt
gtcctcgcgcccctttctcgctgcttgggagcggcggttggtagtcccgtgtcctgtctg
tacggaagcgcggggagcgaatggtttcgtccgccccgcaatagcctccaggatccagtg
tgcgctgatgtgacatctctagcaaagaacgtattacggtacacctgccaattgctgcta
cagtggctgatcacaaagctttgttggatacaggtggaaaagtggctagctctggaaatg
ctggttacttcccagataatggcgaagatggtaagaagaaggtgtgcattttgtcccgag
ggtgaggaatgttctataatgtacatctcggaggagcaaaaccttgcagttcatcaagac
tgtttgctatattcctcaggatttgtggaatctgaagagtacaacccagataatcttgat
ataaggtttgatgtagcttcagtgttgaatgaaatcaagagaggaaagcggctgatgtgc
aacttctgtcgcaaaaaaggagctactgtaggctgtgaggaaagagcctgtcgccgaagt
taccactacttttgtgcactgtgcgatgatgcagcaatagaaactgatgaagtaaaagga
atttaccgggtgttctgtccaaaacatgacccaggcaataggaacaatcactatggaaag
gtcagctcccagactactgcactggacagcacagtttggggaggagatgcagtcagtagg
aggagaaggcagtcaatgatatcttccaccatcagggaagcaatgagcacagaggaaaca
gcagaagagaatagtttacgagttctaaggaacaataacagacacaaagtaagaatagat
tttcttcggaagtgcaagcgggccgggcttctggatgatatattcgaagcaatgcttgac
acacttcaccttgcacaggaaaaactcatggatgataacacttcagaaacagagtatgag
gaaactgtaacatcactttttgaatgtggcctgtttgaaaacatacttacaaatgctcat
tcagggacagaggaaaagattcaggaacttcttgaaaccaggaaaaggctggatactcag
attgaactgctgcaagagttaaaagaagaagtagttcttcctgttcaggaaaacagagcc
agtgcatctagttcagtgtctgaatag

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