Alligator mississippiensis (American alligator): 106740422
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Entry
106740422 CDS
T03087
Name
(RefSeq) E3 ubiquitin-protein ligase rnf213-alpha-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
106740422
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106740422
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106740422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTTB
Motif
Other DBs
NCBI-GeneID:
106740422
NCBI-ProteinID:
XP_019340258
LinkDB
All DBs
Position
Un
AA seq
2117 aa
AA seq
DB search
MAENRLQGTEDVELDNREPKPLTDDAKSDLVVRAGSQPEANAAGLKNEGHKDAHSEGACP
EEEEGDNQQQPEVSIHAEATLRRACVQVHPLSEGYSAGKESSSGSQPDCETAEEAKETCD
FGQTGTEVTPCTDVAEHKGSEELTECTARCLPNPCSSNTEHMTLEFIAPLSSKWTCKGSN
VKIVVGIYKEPGVYEECADMHLAANKDIERIIAKGRISLSNLQHGKPLYYRYGILDFYDD
NRPLQLEDFPETSSKNKKNLFLRVLVIPERTIEANGVWTQYDDTCHFQNEGWRLFRGTPS
VSKDSISYVVKEFRQECKQNFTDLERKIHCYILCSKARKRFDVKQNKTTEVGCKKEETAN
IICKFAEEIIKMPKAPDCTASIVQELLFSLYILFYYKLPIHRGFWTEIKNVLPYTYPLEG
KLPNLTEDRKSDYIRALMYTCKSRSSSESRSSGWMWLIPLLYAVAYQGPTSEATQKLLHE
EIKQLSFHLLGTEGKQEKVIKMIKAHQTFIEKCAPLAKQIIEMLTLNSLAEVLTLPIRLP
LLPLLERVCSQDFTEGKIKENISRSVLTELVGRTESWLRDKFLLQKEKSVLEAKELEDIL
RGVELVFSLVKNCFQNSWSNEVIPALQILNVFSSTEDLLKNEKAFKNLRGTDRCKNFEKC
AKEWVEKAFPKPQKKSHFLKGIDKWQQLFSVRLFCDEWTTQWQELIHLSYSEWIKKIEHE
DLFSYYKAFLDTEKYQDRDLASSLLEHIIQNIEKMPKTKVTGLQHIIRNFSRMKTSVVEK
ILSAVIESMWTEDLRLITEPTRFEEETGNVIVWLLESSLGQDIISTIHQPKRPICINEKA
QELLSKVLKLLSFVGDSLFLGDIPCSVLRGLLKHKQGFITMLCTIDKSPKKSECFTHQNI
THVLDIREQELKQLEEQKKQKCAFIKMCNSISAVIKVDLDGMTQSTDEKQSIRNQMSVKT
FSIEEEIKRADTEPPALAKYDSMVRKVYTLKESQCFPKLWKLKAEQAKGKFPGEAILSLD
EAQENIYNPAMEDFEKTYRSLKDCSINFGSIKRQFKTVIKEKVLLKKEFEIMENSMGEAG
SKRSWVETAMDKIHNYETLSTVVQTAQMINELRRELGLDGDFQILDDLTRYNEEDFKNKR
LDYITDDVMKVKKTLSDLSPNVLDFLKELLECSKKSFVSWVKAIIKDRTELPTFVDLASI
SAGEDNMDFDKVQFFHNAISVSGPIIFDLNSTSGFEDFCAALQPIKEAIVDDNVLPEKLR
VSCLNKEWLQMVHDCHGSVELPSLDDCISLELPEDDAKSAPQQDATAKKAYSLAQLTELQ
NKLMLIATKVEQGQEEAKRFLEILEKIRMVGKLYLELLEVGNILFIDWKAQVDCGHKHNI
NIYVEFGISGVLVQSNRPFLEELSGICRAMERCLGEWKKYLETQRNNYYHLNMFTARQLF
YLCSKLATANKTEVDLQVLNLLSVFKHDITVEDIRDALNKALETPSESISMAGEDEQSVT
WLSYTVKFPQLIQSLVDAGYDESVVKAGLQSYSPNVAITEQMLMEYALEHGENEEEIEEL
SKLYEEQREDFLQKSKKFKKRSTEAEQYAFSSLTKDKLAVSFESLPSIQDKVNLLWDAYC
TRLTGLVSDRYISLDVFGEMLKCLATAEASCIERNLPVGFEAGRPGLVMCKEEEMLRYML
SVYRCTEKAPLPTSEEVLVCTSETREEDVELIVRRALSPGSKHKKIYCLLGADKLVYKVS
KKLEFQFFHLAQSSSVPDYRFLIFCDAKAHNSYIITAFDNYKVSLSCNSEADIQQYLRTH
LTVPMAPVTRAFEEPYRQNMKFVFSEEAGMGKSLFVANTIKKAKDLPENTGLTHKTIRMM
ESEINFGFLLKELCSLEDKPTDVVPRIFHIDVSPVVSKGLYRLLIELCILRHTQSPDGLV
WKCKASHLYLIEYMMTSNMEREFLALLPAVKCVSPVEVLEVLGKSSSGTDVAVERQLLDR
GTFKGEAFQRSYQYLRRYQNHQNLDRFCYSPQTVEGTEEECLRLLLQCCGRKNPSWTELS
NFAQFLSLQLMKCETSVFCSEAAGREFGGFKSFVIKFMIAMSKDFAMPSLVMSDESFPRG
EGKKEEDSVLTGITWKR
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatcggctacaaggaactgaggatgtcgaactggataacagagagcccaaa
cctctaaccgatgatgccaagtctgacctggttgtaagagctggatcccagccagaagcc
aatgctgcaggactgaaaaatgagggacacaaggacgcccattcagagggcgcttgccct
gaagaagaggaaggggataaccaacagcagccagaagtatctatccatgcagaagcaact
ttaagaagggcctgtgtccaagtacatccgctaagcgaaggatactccgctggaaaggaa
tcaagctctggatcccaaccagactgtgagactgccgaggaagcaaaagagacatgcgac
tttgggcagactgggactgaggtgacgccctgcacagatgttgcagagcacaaaggcagc
gaagagctcacagagtgtactgccaggtgcttgccgaatccatgctcatcgaacacagaa
catatgaccctggagtttattgctccgttgtccagtaaatggacatgtaagggtagcaat
gtcaagattgttgttggcatctacaaggaacctggagtatatgaagaatgtgctgatatg
cacttagcggccaataaggatattgagagaattattgcaaaggggagaatatctctttcc
aacctacagcacggaaagcctctttattacagatatggcatccttgacttttacgatgac
aacaggccattacagttagaggattttcctgaaacatcttcaaaaaacaaaaagaatctc
ttccttcgagttctggttatccctgaacggaccattgaagcaaatggagtgtggacccag
tatgatgatacctgccattttcaaaatgaagggtggcgactttttcgggggacgccatct
gtcagtaaggatagcataagctatgtggtaaaggagtttcgccaggaatgcaagcaaaac
ttcactgatttggaaaggaagattcactgctacatcctttgctccaaagcccgaaaaaga
tttgatgtgaaacaaaataaaaccactgaagtgggctgtaaaaaggaagagactgccaac
atcatttgcaaatttgctgaggagatcattaaaatgcccaaggctccggattgcaccgct
tcaatagtgcaagagctcctcttttcattatatatattattttactacaaattacctata
cacagaggtttctggacagagataaaaaatgtgcttccatatacttacccactggaaggc
aaactcccaaacttgacagaagacagaaaaagtgactatattcgtgctctgatgtacact
tgtaagtcccggagctctagcgagagtaggagttctggctggatgtggctgattcctttg
ctgtatgctgttgcctaccaagggccaacttctgaagcaacacagaagcttcttcacgaa
gaaatcaagcagttgtcttttcacttgctggggacagaaggaaagcaagagaaagttatt
aaaatgatcaaggctcatcagaccttcattgagaaatgtgctcctctggcaaagcaaatc
atcgagatgctcaccctgaacagccttgccgaggtgcttactcttccaattcgcttaccg
cttctgcctctcttggagagggtttgctcgcaggacttcactgaaggcaaaatcaaggaa
aatatttctcgttctgttctgacagagctggttggaaggacagagtcctggctcagagac
aaatttctattacagaaggagaagtctgtcctggaggcgaaggagttggaagatattctg
cggggtgtggaattagtattctcgttggttaaaaattgctttcagaactcatggtctaat
gaagtgataccagcactacaaattttaaatgtgttctcttcaacagaggacctattgaaa
aacgaaaaggcatttaaaaacttaagaggaactgatagatgcaagaactttgagaaatgt
gcaaaagagtgggtcgaaaaggcattccccaagccacaaaagaaaagccactttctaaaa
ggcattgataaatggcaacagcttttttcagtgagactgttttgtgacgaatggacaaca
cagtggcaagaacttattcacctttcttatagtgagtggataaaaaagatagagcatgaa
gacctgtttagctattacaaggctttccttgacactgaaaagtatcaagatagagatctg
gcatcttcccttttggagcatatcattcaaaatatcgaaaagatgccaaaaaccaaggta
acgggtctgcaacacatcattcgcaatttctcaagaatgaagacatcagttgttgaaaaa
atactatctgctgtcattgaaagcatgtggacagaagacctgagattgataacggagcct
acacgttttgaagaggagacggggaatgttattgtatggctacttgagtcctctttgggc
caggatattatttcaactatccaccaaccaaagcgtccaatttgtatcaatgaaaaagca
caagaattgctttctaaagtgttgaagctgctctcctttgtgggtgacagtttatttttg
ggagacatcccctgcagtgtgctgcggggccttctaaagcacaagcagggatttataaca
atgctgtgcaccattgataaatcacctaaaaagtcagaatgttttactcatcagaatata
actcacgtgcttgatatcagagaacaagagctcaagcaactggaagagcagaaaaaacaa
aagtgtgcatttataaaaatgtgcaactccatctcggcggtcataaaagttgatctggat
ggcatgacacaaagcactgatgaaaagcaaagcatcagaaatcagatgtcggtgaagaca
ttctctatcgaggaagagataaaacgtgcagacacagaaccacccgcacttgctaaatat
gatagtatggttagaaaagtatatacgctaaaggaaagccagtgctttccaaaactgtgg
aagctgaaagcagaacaagccaaaggcaaattcccaggggaagcaattctgtccctggat
gaggctcaggaaaacatttataacccagccatggaggattttgaaaaaacctataggtcc
cttaaagactgctccatcaattttggcagcattaaaaggcaatttaagacggtgataaaa
gaaaaagtcctgctcaagaaggagtttgaaatcatggagaacagtatgggagaagcaggt
agcaagcgcagttgggtggagactgcaatggataagattcacaactacgagacattgtcc
acagtggtgcagacagcccagatgatcaatgaactgcgaagagaactgggcctggatgga
gatttccagatccttgatgacctgaccagatacaatgaagaagacttcaagaacaaaaga
cttgattacataaccgatgatgtcatgaaggtgaaaaagactttgagtgacttgtcacca
aatgtactggacttcttgaaagaactccttgaatgttccaaaaaatcctttgtctcttgg
gtcaaagctataataaaagacagaacagaacttcctacgtttgtggacctggcatctatt
tctgcaggagaagataacatggacttcgataaagtgcagttcttccacaacgctatctct
gtctctgggcccatcatttttgacttgaactctacatcaggttttgaagacttctgcgca
gctttacagcccatcaaagaagctatagtagatgataatgtacttccagagaagctacgg
gtttcctgtctcaacaaagaatggctgcaaatggtccatgactgccatgggtctgtagag
ttgccttctcttgatgattgtatttcactggaactgccagaggatgacgccaaaagtgct
ccccagcaagacgctacagccaagaaggcgtatagccttgctcagctcacagaattgcag
aacaagctcatgctgatagccacaaaggttgaacaggggcaagaggaggcgaaacggttc
ttagagatcctggaaaaaatcaggatggttggaaagctgtatttggagctgcttgaggtt
ggcaacatccttttcatagactggaaagctcaagttgactgtggccacaagcacaatata
aatatctatgtagagtttggaatatctggcgtcctcgttcagagcaacaggcctttcctg
gaagagttgagtggcatatgcagagccatggagcgttgtctcggcgagtggaagaaatac
ctggagactcaaaggaacaattattaccatctcaacatgttcactgctcgtcagctcttc
tacttatgcagcaagttggccacagcaaataaaaccgaagtggatttgcaggttcttaat
ttgctttcggtattcaagcacgacattacggtagaggatatcagagatgcattaaacaaa
gcacttgaaacgccatcagaatccatcagtatggcaggggaagatgaacaatcggtgact
tggctcagctacactgttaaatttcctcagcttatccaaagtcttgttgatgctgggtat
gatgaatcggtagttaaggctggactgcaaagttactccccaaatgttgccattactgaa
cagatgctcatggaatatgccttggagcatggcgagaatgaggaagagattgaagagtta
agcaagttatatgaggaacagagagaggattttcttcagaagtcaaagaagtttaagaag
aggagcacagaagcggagcagtatgctttcagcagtcttacaaaagataaattggctgtt
tcattcgagagcttgccatctatccaagacaaggtcaatctgctctgggatgcctattgc
accaggctcactggcctggtgtccgacaggtacatcagtctggatgtttttggggaaatg
ctgaaatgtttagcaactgctgaagcctcttgcattgagagaaatttgccggtgggtttt
gaagcaggacgacctggccttgttatgtgcaaagaagaagagatgctgcgctacatgctg
tctgtctaccgatgcacagaaaaggcacctcttccgacatctgaagaggtcctggtgtgt
acgtctgagacgcgagaggaagacgttgagctgattgtcaggagagctctttccccaggc
tccaaacacaagaagatctactgcttgctgggcgcagacaaattggtttacaaagtctcc
aaaaagctggagttccagtttttccacttggcgcagtcctccagtgtccctgactaccgg
ttccttatcttctgtgatgccaaagctcacaattcttatattatcacagcctttgacaac
tataaagtttctctttcctgtaactcagaagcagacattcagcagtacctgaggacgcat
ctgacggtacccatggcacctgtcactcgggcctttgaagagccctatcggcagaatatg
aagtttgtgttttcagaggaagccggcatgggaaaatctttgtttgtggcaaacaccatt
aaaaaggcgaaggacctcccggagaacactggcctgacccacaaaaccatccggatgatg
gagtcagaaatcaattttggattcctcctgaaggaactttgctcgctggaagacaagcca
accgatgtcgtgccccggatcttccacattgatgtctccccggtcgtgtcaaagggtctg
taccggttgctgattgagctgtgcattctgcgacacacccagagccctgatggcctggtc
tggaaatgcaaagcctcccacctgtacttgattgagtacatgatgaccagtaacatggag
agagaatttctagctcttcttccagctgtgaaatgtgtatcgccagtagaggtattagag
gtccttggaaagtccagttctggcactgatgttgcggtggaacggcagctgttggacaga
ggcacattcaagggtgaagccttccagaggtcatatcagtatctcaggcgctaccagaat
caccaaaatcttgaccgattctgttacagccctcagaccgtggaagggaccgaggaggag
tgtctgaggctcttgctgcagtgctgtgggcggaaaaacccttcctggactgagctcagc
aacttcgctcagttcctgagcctccagctgatgaagtgcgaaacctcggtgttctgcagc
gaagcagcaggacgagaatttgggggctttaaatcatttgtgataaagttcatgatcgcc
atgtccaaggactttgccatgccttctctagtcatgtcagatgaaagctttccaagggga
gagggtaaaaaagaggaggacagcgtgctgacagggattacctggaagcgatag
DBGET
integrated database retrieval system
