Alteromonas macleodii Black Sea 11: AMBLS11_02215
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Entry
AMBLS11_02215 CDS
T02260
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amk03019
]
AMBLS11_02215
03009 Ribosome biogenesis [BR:
amk03009
]
AMBLS11_02215
Messenger RNA biogenesis [BR:
amk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AMBLS11_02215
Ribosome biogenesis [BR:
amk03009
]
Eukaryotic type
Pre-60S particles
RNases
AMBLS11_02215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFT77035
LinkDB
All DBs
Position
523405..523950
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AA seq
181 aa
AA seq
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MSKHDSNLVWIDMEMTGLDPETCVVMEIATIVTDAQLNILAEGPVIAVHQSDDVLNNMDE
WCTRVHGESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCGNTIGQDRRFMVKYM
PELEAYFHYRNIDVSTIKELTRRWKPEILDGFEKKGVHLALDDIRESIEEMRYYREKVFT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacacgacagtaaccttgtttggatagacatggaaatgacagggttagatcct
gaaacctgtgtagtaatggaaattgcgaccattgttacagatgcacaacttaacatattg
gctgaaggccccgtaatagcggtacatcaaagtgatgacgtactaaacaatatggacgag
tggtgtacacgagttcacggagaaagtgggctaaccgcgcgttgccgagaaagtaagata
agcgtagaagaagcatcggcgcagaccattgcctttttagagcaatgggtagatgcaggc
aagtcaccgttgtgtggaaacaccattgggcaagaccgacgcttcatggttaagtacatg
cccgagcttgaagcttacttccactatagaaatattgacgtaagtacaataaaagagctg
acgcgccgctggaagcctgaaattttagacggtttcgaaaagaaaggcgtacacctggca
ctagatgatattcgcgagtctattgaagaaatgcgttattatcgtgagaaagtgtttacg
atttaa
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