Ailuropoda melanoleuca (giant panda): 100469453
Help
Entry
100469453 CDS
T01329
Gene name
DDX58
Definition
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
3.6.4.13
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04064
NF-kappa B signaling pathway
aml04622
RIG-I-like receptor signaling pathway
aml04623
Cytosolic DNA-sensing pathway
aml05160
Hepatitis C
aml05161
Hepatitis B
aml05162
Measles
aml05164
Influenza A
aml05168
Herpes simplex virus 1 infection
aml05169
Epstein-Barr virus infection
aml05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100469453 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100469453 (DDX58)
04623 Cytosolic DNA-sensing pathway
100469453 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
100469453 (DDX58)
05160 Hepatitis C
100469453 (DDX58)
05171 Coronavirus disease - COVID-19
100469453 (DDX58)
05164 Influenza A
100469453 (DDX58)
05162 Measles
100469453 (DDX58)
05168 Herpes simplex virus 1 infection
100469453 (DDX58)
05169 Epstein-Barr virus infection
100469453 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aml04054
]
100469453 (DDX58)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
100469453 (DDX58)
Pattern recognition receptors [BR:
aml04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100469453 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
ResIII
DEAD
Helicase_C
AAA_22
PTS_IIB
Motif
Other DBs
NCBI-GeneID:
100469453
NCBI-ProteinID:
XP_002928312
Ensembl:
ENSAMEG00000003766
UniProt:
D2HZI2
LinkDB
All DBs
Position
7
AA seq
928 aa
AA seq
DB search
MSAEDRQNLHAFRDYVVKTLDPTYILSYMAPWFKDDKVQHIQAEKNNKGTTEAASLFLKF
LLELQEEGWFRGFLDALGHAGYSGLYEAIETWDFRKIESLEEYRLLLKRLQPEFKTTVNP
KDILPEISGCLISQECEEIIQVCSNKGLMAGAEKMAECLLRSDKENWPKTLKLALEIEES
QFSQLWIMDKDAKNVEPKVLEDDEIETSDIQIFYKEEPECQNLSQNPSPPSASPTFTQLK
PRNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAIQLPV
YEQQKSVFSKYFEKLGYKVAGVSGATSEIVSVEEIVENYDIIILTPQILVNSLRKGTVPS
LSVFTLMIFDECHNTGKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTASVGTGDAKNTTE
AMEYICKLCASLDTSVIATVKDNLEELEEIVYKPQKFFRKVKLRTTDRFKCIISQLMRET
ESLAKKIFDELSTVTLENVFQIQNRNFGTQKYEQWILSVQKTCILFQLPDKEEESRICKA
LYLYTSHLRKYNDALIINEHARMKDALDYLKDFFANVRAAGFDEIEQHLTWRFEEKLREL
ESVSMDPGNENPKLQDLSFILQEEYHLNPESRTILFVKTRALVDALKKWIEENSELSFLK
PGILTGRGKTNQNTGMTLPAQKCALDAFRTDGDKKILIATSVADEGIDIAQCNLVILYEY
VGNVIRMIQTRGRGRARGSKCFLLTSNADVIEKEKINIHKEKMMNDSILRLQTWNEAVFK
EKVLQIQIQEKLIRDSQGKVERVPDKENKKLLCRKCKGFACYTADIRVVEDCHYTVVGDD
FRKCYVSKLHPKPKSFGYFEKTAKIFCSREDCSHDWGIHVKYKTFEIPVIKIESFVVEDI
ATGAQKLYAKWRDFPLQKIPFDAAEMSK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaggatcggcagaatctgcacgccttccgggactatgtcgtgaagactctg
gaccctacgtacatcctgagctacatggccccctggtttaaggacgacaaggtgcagcat
atccaggctgagaaaaacaataagggcacgacagaggccgcctcactttttcttaagttc
ctattggagctccaggaagaaggctggttccgtggctttttggatgcccttggtcatgca
ggttattctggactttatgaagccattgaaacttgggatttccgaaaaattgaaagtcta
gaggagtacagattgcttttaaagcgtttacagccagaatttaaaaccacagttaatcca
aaagatatccttcctgaaatatctggatgtttaattagtcaggaatgtgaagaaatcata
caggtttgttccaacaaggggctgatggcaggtgctgagaaaatggccgaatgccttctc
agatcagacaaggaaaactggcccaaaactttgaaacttgctttggagatagaagagagc
cagttcagtcaactgtggattatggacaaagatgcaaaaaatgttgaaccgaaagtcctt
gaggatgatgaaatagaaacttctgacatacagattttctataaggaagaaccagaatgc
cagaatcttagtcagaacccatctccgccttcagcctctcctactttcacccaactgaag
ccaagaaattaccaacttgagctcgcgttgcctgctaaggaaggaaaaaacacaataata
tgtgctcctactggttgtggaaaaacctttgtttcccttcttatatgtgaacatcatctt
aaaaaatttccacaaggacaaaaagggaaggttgttttttttgctattcagctccccgtg
tatgaacagcagaaatccgtgttctccaaatattttgaaaaacttgggtacaaagttgca
ggtgtttctggagcaacatctgagattgtctcagtggaagagattgttgagaactatgac
atcatcattttaactccacagattcttgtgaatagtcttagaaaagggactgttccatca
ctctctgtctttactttgatgatatttgatgaatgtcacaacaccggtaaacaccatcct
tacaatatgatcatgtttaattatctggatcagaaacttggaggatcttcagacccactg
cctcaggtcattgggctgactgcctcggttggcactggggatgccaaaaacacaacagaa
gccatggaatatatctgcaaactgtgtgcttctcttgacacatcagtgatagcaacagtc
aaagacaacttggaagaattggaagaaattgtttataagccccagaagtttttcaggaaa
gtgaaattacggactactgacagatttaaatgcatcatatctcagctgatgagggaaaca
gagagtctggcaaagaagatctttgacgagctcagtaccgtaactctcgaaaatgtattt
caaattcaaaataggaattttggaacacagaaatacgaacaatggatcctttctgttcag
aaaacatgcattttgtttcagttgcccgacaaagaagaggagagcaggatttgtaaagcc
ctgtatttgtacacttcccacttgcggaaatataatgatgccctcattatcaatgagcat
gcccggatgaaagatgctctggattacttgaaagacttcttcgctaatgtccgagcagca
ggatttgatgagattgagcagcatctcacctggagatttgaagaaaaactgagggaactg
gaaagtgtttcaatggatcccggcaacgagaaccctaaactccaagatctctcctttatc
ttgcaagaggagtaccacttaaacccagagagtagaaccatcctctttgtgaaaaccaga
gcacttgtggatgctttgaagaaatggattgaagaaaattctgaactcagctttctaaaa
cctggcatattgactggacgtggcaaaacaaatcagaacacagggatgacgctcccagcg
cagaagtgtgcgttggatgcattcagaaccgatggcgataagaagattctgattgccacc
tccgttgccgatgagggcatcgacattgcacagtgtaacttggtcatcctgtatgagtat
gtgggcaatgtcatcagaatgatccaaaccagaggcagaggaagagcaagaggtagcaag
tgcttccttctgaccagcaatgctgatgtaattgaaaaagaaaaaataaacatacataaa
gaaaaaatgatgaatgactccattttaaggcttcagacgtggaatgaagcagtatttaaa
gaaaaggttctccagatacagattcaagaaaaactcatcagggatagtcaaggaaaagta
gaacgtgtacctgataaggaaaataaaaaactgctctgcagaaagtgcaagggctttgcg
tgttacacagctgacatcagagtggtggaggactgccattacactgtggttggagatgat
tttaggaagtgctatgtgagtaaattacaccccaaaccaaagagctttgggtatttcgag
aagacagcaaagatcttctgttccagagaggactgcagccatgactggggaatccatgtg
aagtacaagacatttgagattccagttataaaaatagaaagctttgtggtggaagatatt
gctactggagctcagaaactatatgcaaagtggagggactttcctttgcagaagataccc
tttgatgctgcagaaatgtccaaatga
DBGET
integrated database retrieval system
