KEGG   Ailuropoda melanoleuca (giant panda): 100478297
Entry
100478297         CDS       T01329                                 

Gene name
RBL1
Definition
(RefSeq) retinoblastoma-like protein 1 isoform X1
  KO
K04681  retinoblastoma-like protein 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04110  Cell cycle
aml04218  Cellular senescence
aml04350  TGF-beta signaling pathway
aml05165  Human papillomavirus infection
aml05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    100478297 (RBL1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100478297 (RBL1)
   04218 Cellular senescence
    100478297 (RBL1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100478297 (RBL1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100478297 (RBL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100478297 (RBL1)
Transcription factors [BR:aml03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    100478297 (RBL1)
SSDB
Motif
Pfam: RB_A RB_B DUF3452 ATLF
Other DBs
NCBI-GeneID: 100478297
NCBI-ProteinID: XP_034496147
Ensembl: ENSAMEG00000012415
LinkDB
Position
13
AA seq 1068 aa
MFEDEPHAEGAAVVAAAGEALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLA
CSLYVACRKSIIPTVGKGIMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRE
RIERLERNFEVSTVIFKKFEPIFLDIFQNPFEEPPKLPRSRKQRRIPCSVKDLFNFCWTL
FVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPPNFHTADFR
ASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSK
AVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGDTPLGKLTTQANVDCNLQQHFE
KKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRIQSIVAGLKNAPSEQLINIFESCM
RNPMENITKIVKGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQET
RRLHGMDMSVLLEQDIFHRSLMACCLEVVLFAYSSPRTFPWIIEVLNLRPFYFYKVIEVV
IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASSNKVPTCEEVIFPNNFETG
NGGNVQGHLPMMPMSPLMHPRVKEVRTDSGSLRRDMQPLSPISVHERYSSPTAGSAKRRL
FGEDPPKEMLMDRIITEGTKLKIAPSSSITAENISISPGQSLLTMATAIVTGTTGHKVTI
PLHGIANDAGEITLIPISMNTAQESKVETPVPLTAQSLIGASPKQTHLTKAQEAHPTGIS
KPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHL
DQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNING
DFEMTDCELEDATKTPDCSNGPVKEERGDLIKFYNTIYVGRVKSFALKYDLSNQDHVMEA
PPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYKFSGSPSKSLKDINNM
IRQGEQRTKKRAIAIDGDAESPAKRLCQENDDVLLKRLQDVVSERANH
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgttcgaggacgagccccacgctgagggggcagcggtggtcgccgcggccggggaggcg
ttgcaggccctgtgccaggagctgaacctggacgaggggagtgcagccgaagccctggac
gacttcaccgccatccggggcaactacagcctagagggagaagttatacactggttggca
tgttcattatatgttgcatgccgcaaaagcattattcccactgttgggaagggtatcatg
gaaggaaattgtgtttcacttaccagaatactgcgttcagctaaactaagtttaatacag
ttttttagtaaaatgaagaagtggatggacatgtcaaacctgccacaagaatttcgtgaa
cgtatagaaaggctagaaagaaattttgaggtgtctactgtaattttcaaaaaatttgag
ccaatttttttagacatatttcaaaatccatttgaagagccaccaaagttaccacgaagc
aggaagcagaggaggattccttgcagtgttaaggatctctttaatttctgttggacactc
tttgtttatactaagggtaattttcgtatgattggagatgatttagtaaattcttaccat
ttacttctgtgctgcttggatctgatatttgccaatgccattatgtgcccaaatagacgt
gacttgctgaatccatcatttaaaggtttaccacctaatttccatactgctgacttcagg
gcttcggaagagcctccctgcatcattgctgtactgtgtgaactgcatgatggacttcta
gtagaagcaaaaggaataaaggagcactactttaagccatatatttcaaaactgtttgac
agaaagattttaaaaggagaatgcctcctggacctttccagttttactgataatagcaaa
gcagtgaacaaggagtatgaagaatatgttttaactgttggtgattttgatgagaggatc
tttttgggagcagatgcagaagaggaaattggaactcctcgaaagttcactggcgacacc
ccattaggcaaactgacaacacaagctaatgtggactgtaatcttcaacaacactttgaa
aaaaaaacgtcatttgcaccttcaaccccactgacagggcggcgatatttacgagaaaaa
gaagcagtcattactcctgttgcttcagccactcaaagtgtgagccggatacagagtatt
gtggctggactgaaaaatgcaccaagtgaacaacttataaatatttttgaatcttgtatg
cgtaatcctatggaaaacattacgaaaatagtgaaaggaataggagagactttctgccaa
cactatactcaatcaacagatgagcagccaggatcgcacatagactttgctgtaaacaga
ctaaagcttgcagaaattttgtattataaaatattagagactgtaatggttcaggaaaca
cgaagacttcatggaatggacatgtcagttcttttagagcaggatatatttcatcgttcc
ttgatggcctgttgtttggaagttgtgctctttgcctatagctcacctcgtactttcccc
tggattattgaagttctcaatttacgaccattttatttttataaggttattgaggtggtg
atccgctcagaggagggactttccagggatatggtgaaacacctgaacagcatcgaagaa
cagattttagagagtttagcatggagtcatgattctgcactatgggaggctctccaggct
tcatcaaacaaagttcctacctgtgaagaagttatattcccaaataactttgaaacagga
aatgggggaaatgtacagggacatcttcccatgatgccgatgtctcctctaatgcatcca
agggtcaaagaagttcggactgacagtgggagtcttcgaagggatatgcaaccattgtct
ccaatttctgtccatgaacgctacagttctcctactgcagggagtgctaagagaagactt
tttggggaagaccccccaaaggaaatgcttatggacaggatcataacagaaggaacaaaa
ttgaaaattgccccttcttcaagcattactgctgaaaatatatcaatttccccagggcaa
agtcttctaactatggccacagccatagtcacaggaacaacgggacataaagttacaatc
ccattgcacggtatcgcaaatgatgctggagagatcacactgataccaatttccatgaac
acagctcaggagtccaaagtcgagacccctgtaccacttactgctcagtcattaattggt
gcttctccaaaacagacccatctgactaaagcacaagaggcacatccaactggaataagc
aaaccaaagagaactgggtctttagcactgttttatagaaaggtctatcatttggcaagt
gtacgcttacgtgatttatgtttaaaactggatgtttcaaatgagttacgaaggaagata
tggacgtgttttgaattcactttagttcactgccctgatctaatgaaagacagacatttg
gatcagctgcttctttgtgccttttacatcatggcaaaggtaacgaaagaagaaagaaca
tttcaagaaataatgaaaagttataggaatcagccccaggctaacagtcatgtctataga
agtgtactgttgaaaagtattccaagagaagttgtggcatacaataaaaacataaatggt
gattttgaaatgacagattgtgagttggaagatgctacaaaaacacctgactgttccaat
ggaccagtgaaagaggaaagaggtgatcttatcaaattttacaatacaatatatgtagga
agagtgaagtcatttgcactgaaatacgacttgtcaaatcaggaccacgtgatggaagct
ccacctctctccccttttccacatattaagcaacaaccaggctcaccacgccgcatttcc
cagcaacactccatttatgtttccccacataagaatgggtcaggccttacaccaaggagt
gctctgctatataagttcagtggcagcccttctaagagtttgaaagatatcaacaatatg
atcaggcagggtgaacagagaaccaagaagcgagcaatagccatcgatggtgatgcagaa
tcacctgccaaacgcctctgtcaagaaaatgatgatgttttgcttaaacgactacaggat
gttgtcagtgagagagcaaaccattaa

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