Ailuropoda melanoleuca (giant panda): 100478852 Help Entry 100478852         CDS       T01329                                  Symbol CIC Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism aml  Ailuropoda melanoleuca (giant panda) Pathway aml05017   Spinocerebellar ataxia Brite KEGG Orthology (KO) [BR:aml00001]  09160 Human Diseases   09164 Neurodegenerative disease    05017 Spinocerebellar ataxia     100478852 (CIC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:aml03000]     100478852 (CIC) Transcription factors [BR:aml03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     100478852 (CIC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF4819 Motif Other DBs NCBI-GeneID:  100478852 NCBI-ProteinID:  XP_034494899 Ensembl:  ENSAMEG00000029555 LinkDB All DBs Position 12:complement(34815828..34834124) Genome browser AA seq 2274 aa AA seqDB search MKPMKKACVGLPGSGSGGKSPLATRAKALRRRGAGEGDKPEEEDEETQPQQQHPGPEEAE EGEEEESERGPAAEGLPPELPSDDPAAPGPAEDPKVEGEASRWEPSLSRKTATFKSRAPK KKYVEEHGAGSGSSGAAGAPEERARTPEEAGTLGVPPRPPTSTRSSSTDTASEHSADLED EPAEACGPGPWPPSGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGD RALTFYEGVPGGGVDVVLDATPPPGAVVVGTAVCTCVEPGVAAYREGVVVEVATKPAAYK VRLSPGPNAQPGPPAALPQPPQLPHREPEEAVWVARSSLRLLRPPWEPEALPRKPPAGPE EEQAEPGGALPPCPAALDPKQPEDAEVSKISFGGNLGTCEEGEEKHPPALGTPALLPLPP PQLLSPPPKSPAFAGPGHPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQ QKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADS GPGGTGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECE AAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAV RSRHLSASTPKGGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTEL LPHPGALGAPGAGGGGATQDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQ PSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVSTAGEARAAG PGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAF HPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTGKRCGWNGWVKAHLGRGHWQTGSPESG GWYLFCHVAQDFQTSFAQYLEIFVAVSVSLGATKRLLDSVTPLSLYSAVSSELLSVAAQT LLSSDTKAPGSGPCGTERLHAVGGPGSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSG PASYSGPKPSAQYGAPGPFSASSEGGALAASGRPPLLPTRASRSQRAASEDMTSDEERMV ICEEEGDDDVIADDGFGATDIDLKCKERVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSS FTHCRPPLDPEPPGPPDPPPPAFGKGFGPTPSSSSSSSPASSSASAATSFPLGSGTFKAQ ESGQGSTAGPLRPPPPGAGGPVTPSKATRFLPTDPATFRRKRPESVGGLEPPGPSVIAAP PGGGGSVLQTLVLPPNKEEREGSGTRMPSAPAPSLAYGAPAAPLSRPAATMVTNVVRPVS STPVPIASKPFPASGRAEASPNDTAGARTEPVTGSRAPGSSPLGVNLVYSDKKSAAATSP APHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPPAVQFIAQGTPGSGATTGSGAGAGS GPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPAPGTKAAAPSGPAPAS IRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGK VLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPL SPATLSGPTSQPQKVLLPSSTRITYVQSAGGHALPLGTSPTSSQAGTVTSYGPTSSVALG FTSLGPSGPAFVQPLLSGQAPLLTPGQVGVSPVPSPQLPPTCTTPGGPVITAFYPGSPAP TSSAPLAQPSQAPPGLVYTVATSTTPPTATILPKGPPAPATATPAPTSPFPNATAGSMTY SLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPGRSGPAARQPLEPGPAREPPTPESE LEGQPTTPVPPPPPETWAPTARSSPPPPPPAEERTSTKGPETMASKFPSSSSDWRVPGLG LESRGEPPTPPSPAPAPAPAPGSSSSSNEGSSGRAAGDTPERKEAAGTGKKVKVRPPPLK KTFDSVDKVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDL DSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPY SSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQ AATPTEQPPGAEAPLPGPPPTGTAAAPVPTPSPAGGPDPTSPGSDSGTAPFGAE NT seq 6825 nt NT seq  +upstreamnt  +downstreamnt atgaagccaatgaagaaggcatgtgtcggcctcccgggttctggcagtggcggcaagtcc ccactagccacccgggccaaggccctgcgacggcgaggggctggggagggagacaagcca gaggaggaagacgaagagacgcagccgcagcagcagcatccggggccagaagaggctgag gagggtgaggaggaggagtccgagcggggccctgcggctgaggggctgcccccggagctg ccctctgacgacccggcagccccaggccctgctgaggaccccaaggtagagggggaggcg agccgctgggagccctctctcagccggaagacggccacgttcaagtctcgagcgcccaag aagaagtatgtggaggagcatggagccggcagcggtagcagtggggcggccggggcccct gaagagcgggcacggacccccgaggaggccggcaccctgggggtccctccacggccaccc acctctacccgttcctcttccaccgacacagccagcgagcactcagccgacctggaggat gagccagccgaagcttgtgggccaggcccctggcccccaagtggcaccagtggtggctat gatctgcggcagctgaggtcccagcgggtgctggcccggcgtggtgacggcctcttcctg ccggccgtggtgcgccaggtgcgccgaagccaggacctgggggtacagttccctggggac cgggccctgacgttctacgagggggtacccggcggcggtgtagatgtggttttggatgcc acgccgccgccgggtgccgtggtggtgggcacagctgtctgtacctgtgtggagcccggg gtggctgcctaccgtgagggtgtggtggtggaagtggccaccaagccagctgcctacaag gtccgcctcagccccggccccaacgcccagccggggccgccggctgccctgccgcagccc ccgcagctgccacaccgggagcctgaggaggctgtgtgggtggcacgctccagcttgcgc ctgctgcggcccccctgggaacctgaggccctgccgaggaagccccctgcgggccccgag gaggagcaggctgagccagggggcgccctgcccccctgccctgctgccctggaccccaag cagcctgaggatgctgaggtgtcgaagatcagctttggtggcaacctggggacttgcgag gagggcgaggagaagcacccgccggccctgggcacaccggccctgctcccgctgcccccg ccccagctcctgtcgccgccacccaagtccccagctttcgcgggcccgggccaccctggg gagcagccctcaccctgccaggaggggagccagggtggcagccggagcagcagcgtggcc tctttggagaagggggctgcgccagccgcccgggcccgcacaccgctgaccgccgcccag cagaagtataagaagggtgacgtggtctgcacgcccaacggaatccgcaagaaattcaat ggcaagcagtggcgccggctgtgctcccgagatggctgcatgaaggagtctcagcggcgg ggctactgctcgcgccacctgtccatgcgaaccaaggagatggagggcctggcggacagt ggccctggtgggaccggacggccagcaggcgtggcggcgcgtgagggcagcaccgaattt gactggggtgacgaaacatcgagggacagtgaggccagcagcgtggcggcccgcggggac tcgcgcccacgcctggtggctcctgctgacctgtcccgctttgagtttgatgagtgtgag gcggccgtgatgctggtgtcgttgggcagctctcgctctggcacaccctccttctctccc gtgtctacgcagtcgcccttctcacctgccccatcgccctccccgtcgccactctttggc ttccgccccgccaacttcagccccatcaatgcctcaccagtcatccaacgcactgctgtc cgcagccgccatctgagcgccagcaccccaaagggaggcgtgctgacaccaccagacctg ggcccccacccaccgccgcctgcccccagagagcgccattcttctggcatcctacccacc ttccagaccaacctgaccttcaccgtgcccatcagccccgggcggagaaagaccgagctg ctgccccacccaggggccttgggggcccctggcgcagggggcggaggagccacccaggac ttccccaagagcgacagcctagactctggtgtggactccgtgtcccacacacctacaccc tccacaccggctggcttccgggctgtgtcacctgccgtgcccttctcccgctcccgccag ccctcgccattgctgttgttgcccccgcctgctggcctgacctcggatcctgggccttct gtgcgcagggttcctgctgtgcagcgggactcacctgtcattgttcgcaaccccgacgtg ccgctgccctccaaattccctggggaggtgagcactgctggcgaggcgcgggcagcggga cctgggcggggctgccgagagaccccggtgccccctggggtggccagtgggaagcctggc ctgcccccacctctgccagcccccgtgcccatcaccgtgcctccagctgcgccgactgcc gtggcccagccgatgcccacctttggcctggcttcttcacccttccagccggtggcgttc cacccctcacctgctgccctattgcccgtcctggtgcccagcagctacaccagccatcct gcccccaaaaaggaagtcatcatgggccgacctgggacaggtaagagatgcgggtggaat ggctgggtgaaggctcatttgggacggggccactggcaaactggctctccagagagtggt ggctggtacctcttctgccacgtagcccaggattttcaaacttcttttgcccagtatcta gagatatttgtggctgtctcggtcagtctgggtgccactaaaaggcttcttgattctgtg acacctctctccttatattctgcagtgtcctcggagctcctgtctgttgcagcccagaca ctcttgagctcggataccaaggctccagggagcggcccctgtgggacagagcgtctgcac gcagtggggggacctggctcggcccggccccgagccttctcccacagtggggtccacagc ctggatggtggagaagtagatagccaggcactacaggaactgactcagatggtgtctggc cctgcatcctattctggtccaaagccttccgcccagtatggggctccaggccccttctca gcctccagtgagggaggtgccctggcggccagtggccgacccccgctgctgcctacccgg gcctcccgttctcagcgtgcagccagtgaggacatgaccagtgacgaggaacgcatggtc atctgcgaggaggaaggagacgatgatgtcattgctgacgacggcttcggcgccactgac attgacctcaagtgcaaggagcgggtgactgacagtgagagcggagacagctctggggag gacccagagggcagcaagggctttggccggaaggtcttctcacctgtgattcgttcctcc tttacccactgccgcccaccgctggaccctgagcccccagggcccccggatccaccacct ccagcctttggcaaaggctttgggcccaccccatcatcctcctcctcgtcgtcacctgcc tcctcctcagcctcagcggccacctccttcccactgggctcagggaccttcaaggcccag gagtcaggtcagggcagcacggcaggcccactacggcccccaccccctggggctgggggc ccagtgacaccttccaaggccacccgtttcctcccaacggatcctgccaccttccggcgc aagagacctgaaagtgtgggaggcttggagccaccaggtccctcagtcattgcggcacct cctggcgggggtggaagtgtcctgcagacgctggttctgcccccaaataaggaggaacgg gaaggcagcggaacccgcatgccctcggccccagccccatcactggcctatggagcccca gcagcccccctgtcccgcccagctgctaccatggtcaccaatgtggtgcggcctgtcagt agcactcctgtgcccatcgcttctaagcccttccccgcctctggccgggctgaggcatct ccaaatgacacagcgggtgccaggactgagccggtcacagggtcccgggcacctgggagc tccccgctgggcgtaaacttagtgtattcggacaagaagtcggcagcagccacctcgcca gccccgcatctggtggctgggcccctcctgggcactgtggggaaggcccctgccacagtc accaacctgctggtgggcacacccggttatggggccccagcgccccctgctgttcagttc atagcccaggggaccccgggcagtggggccactacaggctcaggagcaggtgctgggagt ggccccaatgggccagtgcctctgggcatcctgcagccaggtgccttgggcaaggctgga ggcatcacccaggtgcagtacatcctgcccacgctgccccagcagcttcaggtggcgcct gccccagcaccagcccctgggaccaaggcagcagctcccagtggccccgcacccgccagc atccgtttcaccctcccaccgggcacctccaccaacggcaaagttctggcggccaccgca cccactcctggcatccccatcctgcagtccgtaccctccgccccgccccccaaagcccaa tcggtttctcctgtgcaggccccgcccccgggtggctcagcccagctgctacccgggaag gtactggtgcccctggcagcccctagcatgtccgtgcggggtggaggggctggccagcca ttgcccctggtgagccctcctttctcagtacctgtgcagaatggagcccagccacccagc aagatcatccagctgacgccggtgcctgtgagcacacccagcggcctggtgccgcccctc agcccagccacactctccggacccacctcacagcctcagaaggtcctgctgccctcctcc accagaatcacctacgtgcagtcggcaggtgggcacgcattgcccctgggcaccagccct acgtccagccaggctggaacagtcacctcgtatgggcccacgagttcagtagccctaggc ttcacctcgctggggcccagcggacccgccttcgtgcagcccctgctttcaggccaagcc ccgcttctgactcctggccaggtgggcgtgtcgcccgtgcctagcccccagctgccgccc acctgcaccacccccggaggtcccgtcatcacggcgttttaccctggcagccctgcaccc acgtcctcagcacccctggcccagccgtctcaggctccccccggcctggtctacaccgtg gccactagcaccaccccacctactgccaccatcctgcccaagggcccaccagccccagcc actgccaccccggcccctactagccctttccctaatgccacagcaggctccatgacctac agtttagtggcccccaaggcccagcggcccacccccaaggccccccagaaagtgaaggcg gccatcgccagcattcccgtgggttcctttgaggcaggtgcccctgggcggtcaggccct gcagcccggcagcccttggagcctggcccagcccgggagccccctacccctgagtcagag cttgaggggcagcctacgacaccggtccctccaccacccccagagacctgggctcccaca gcccggagcagccccccaccgcccccgcctgctgaggagcggacaagcaccaagggtcct gagaccatggccagcaaattccccagctcgtcttcagactggcgagtccctggactgggt ctggagagccgtggggagcctcccacccctcccagcccagcgccagctccggccccagcc cctggcagcagcagcagcagcaacgagggcagcagtgggagggcagccggggacaccccc gagcgcaaggaggccgctggtaccggcaagaaggtgaaggtgcggcccccgcccctgaag aagacctttgactctgtggacaaggtcctgtcggaggtggacttcgaagagcgctttgct gagctgcccgagttccggccggaggaggtgctgccttcgccgaccctgcagtctctggcc acctcgccccgggccatcctgggctcctaccgcaagaagaggaagaactccactgaccta gactcagcccccgaggaccccacttcgcctaagcgcaagatgaggagacgctccagttgc agctcagagcccaacacccctaagagtgccaagtgcgagggggacatcttcacctttgac cgtacaggtacggaagccgaggatgtgctcggggagctggaatacgagaaggtgccatac tcctcactgcggcgcactctggaccagcgccgggccctggtcatgcagctcttccaggac catggcttcttcccatcagcccaggccacggcagccttccaggcccgctacgcagacatc ttcccctccaaggtctgtttgcagttgaagatccgcgaggtgcgccagaagatcatgcag gcggccactcccacggagcagccccctggagccgaggcccccctccccggaccgcccccc actggcactgctgctgcccctgtccccactcccagccctgctgggggccctgaccccacc tcacctggctcggactctggcacagctccgtttggggcggaatga

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