Ailuropoda melanoleuca (giant panda): 100479965
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Entry
100479965 CDS
T01329
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X3
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100479965 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100479965 (HERC4)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100479965 (HERC4)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
HECT type E3
100479965 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
100479965
NCBI-ProteinID:
XP_002913788
Ensembl:
ENSAMEG00000018102
UniProt:
D2GXJ6
LinkDB
All DBs
Position
6:complement(72199820..72334362)
Genome browser
AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYTGQCPPDIDSEE
YFCVKRIFSGGDQSFSHYSNRQNCGPPDDFRCPDPSKQIWTVNEALIQKWLSYPSGRLPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVLHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDVNHGLTELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLDDLKELVPD
VGRSMQQLLDYPEDDVEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGEEYLP
VSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcctttggacagctaggtttgggtggaattgatgaagaa
attgtactagagcccagaaaaagtgacttttttataaataaaaaggtccgagatgtggga
tgtggactcagacatactgtatttgttctggatgatggaacagtgtacacatgtggatgt
aatgatctaggacagctaggtcatgaaaaatccagaaagaaaccagagcaggttgttgcc
ctggatgcccaaaatatcgtagctgtttcatgtggagaagctcatacattagcactaaat
gacaagggccaggtgtatgcatggggtctcgattctgatggacagcttggcctgctagga
tcagaggaatgtatcagagtacccagaaatattaaaagtttgtcagatatccagatagta
caggttgcttgcggttactatcattcacttgcactttctaaagcaagtgaagtcttctgt
tggggacaaaataaatatggccagttgggtttaggcattgactgtaaaaagcaagcttca
ccacagctgattaagtctttgcttggaatccctttcatgcaagttgcagcaggaggagcc
catagttttgtactcaccctttctggagctatttttggatggggacgcaacaagtttggt
caactaggtcttaatgatgaaaatgataggtatgttcctaatttactaaagtcactaaga
actcagaaaatagtttatatttgttgtggagaagatcatactgctgcactaaccaaggaa
ggtggagtgtttacttttggagctggagggtatggtcagttgggtcataactctaccagt
catgaaataaacccaaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttattcttttgga
cttggtggtaatgggcagctaggaactggttcaacaagcaacaggaaaagtcctttcact
gtgaaaggaaattggttcccttatactgggcagtgtccaccagatattgattctgaagaa
tatttctgtgtgaaaagaattttctcagggggagatcaaagtttttcacattattctaat
cgccagaactgtgggccaccagatgactttagatgtcctgatccttcaaaacagatctgg
actgtgaatgaagctctaattcaaaaatggctgagctacccctctggaaggttacctgtg
gagatagccaatgaaatagatggaacgttttcttcctctggttgtctcaatggaagtttt
ctagctgttagcaatgatgatcactatagaacaggcaccaaattttcaggggttgatatg
aatgctgctaggcttttattccacaaacttatacaacctgatcaccctcagatatctcaa
caggtggcagctagtttggaaaagaatcttattcccaaactgactagctccttacctgat
gttgaagcattgaggttttatcttactctgccagaatgccccctgatgagtgattccaac
aatttcacaacaatagcaattccctttggtacagctcttgtgaacctagaaaaggcacca
ctgaaagtacttgaaaactggtggtcagtacttgaacctccactgttcctcaagattgta
gaactttttaaggaagttgtgctgcatcttttgaaactctacaagatcggcattccccct
tctgaaagaagaattttcaacagttttcttcatactgcgttaaaggttttagaaatattg
catagggtaaatgagaaaacgggacagattatacagtatgataaattttatatacatgaa
gtacaagaattgatagacataaggaatgattatatcaactgggtccaacagcaggcctat
ggaatggatgtcaaccatggattaactgagttggcagatatccctgttacaatctgcaca
tatccatttgtatttgatgcccaagcaaaaactactctgttacaaacagatgcagtctta
cagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gtgattgaatctgtgaatccctgcttaattctagttgtgcgtagagaaaatattgtagga
gatgcaatggaagtccttaggaaaacaaagaatatagactacaaaaagccacttaaggtt
atatttgttggagaagatgctgttgatgcaggaggagtacgcaaagaatttttcttactc
atcatgagagaattgttggatcctaaatatggcatgtttaggtattacgaagattccagg
ctcatttggttttctgataagacatttgaagacagtgatttgttccatctgattggtgtt
atctgtggattagcaatttataattttactattgtggacctccattttcctttggcttta
tataagaaactgctaaaaaagaagccatccttggatgatttgaaggaactagtacctgat
gttgggagaagcatgcaacaattactggattatccagaagatgatgttgaggaaacattt
tgtcttaattttacgatcacagttgaaaactttggtgcaacagaagtgaaagagctggtt
ctaaatggtgcagacacagctgttaacaaacaaaatcggcaggagtttgttgatgcttat
gtggattacatattcaataaatcagtggcttccttgtttgatgcttttcatgcgggcttt
cataaggtctgtggaggaaaggtccttcaactcttccagccaaatgaactacaagcaatg
gttattggaaatacaaattatgattggaaggaactggaaaagaatacagaatacaaaggg
gagtattgggcagaacatccaacgataaaaattttttgggaagtatttcatgaattacca
ttggaaaagaaaaaacagtttctattatttttgacaggtagtgatcgcattcctattctt
ggtatgaagagtctaaaactagtcatccagtcaacaggaggtggcgaggaatatctccca
gtttcccatacctgttttaatcttctggatcttccaaaatacacagaaaaagaaactcta
cgctctaaactgattcaagcaattgatcataatgaaggcttcagtttaatataa
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integrated database retrieval system
