Ailuropoda melanoleuca (giant panda): 100480357
Help
Entry
100480357 CDS
T01329
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04136
Autophagy - other
aml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100480357 (ATG4B)
04136 Autophagy - other
100480357 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100480357 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100480357 (ATG4B)
03029 Mitochondrial biogenesis [BR:
aml03029
]
100480357 (ATG4B)
Peptidases and inhibitors [BR:
aml01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
100480357 (ATG4B)
Membrane trafficking [BR:
aml04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100480357 (ATG4B)
Mitochondrial biogenesis [BR:
aml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100480357 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
100480357
NCBI-ProteinID:
XP_034511485
Ensembl:
ENSAMEG00000016425
LinkDB
All DBs
Position
2:199552266..199577069
Genome browser
AA seq
483 aa
AA seq
DB search
MADVHFLLHFRPRPRPLGLDWPRQRPVASRCGTVGATPLSVGGRRGKMDAATLTYDTLRF
AEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPPIGGTGPTSDTGWG
CMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGV
GEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHIAMDNTVVMEDIRRLCSGSLPCAGAA
SLSADSSRHCNGFPAGAEVTDRPAPWRPLVLLIPLRLGLTDINEAYVETLKRCFMMPQSL
GVIGGKPNSAHYFIGYAGEELIYLDPHTTQPAVELTDSCFIADESFHCRHPPSRMSIGEL
DPSIAVVRPRPSCLLGPWGRRSEPVRAQSCSSRMEGQVSASRMCFQCIGGFFCKTEDDFD
DWCQQVRQLSLLGGALPMFELVEQQPSHLACPDVLNVSLDSSDVERLERFFDSEDEDFEI
LSL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgcacttcctcctgcacttccggccccgcccgcgcccgctaggcctggat
tggccccggcagcggcccgtcgcgtcgcgctgcggaaccgtcggagcgacgccgctctca
gtcggcggccggagagggaagatggatgcagctactctgacctacgacactcttcgattt
gctgaatttgaagatttcccggagacctcagagcctgtgtggatactgggtagaaaatac
agcattttcacagaaaaggatgagatcttgtctgatgtggcatccagactttggtttaca
tacaggaaaaacttcccacccattgggggcaccggccccacctcggacacgggctggggc
tgcatgctgcggtgcggacagatgatctttgcccaggccctggtgtgtcgccatttaggc
cgagattggaggtggacgcagcggaagaggcagccggatagctacttcaatgtcctcaat
gcattcatcgacagaaaggacagttactactccattcaccagatagcacaaatgggagtt
ggcgagggcaagtccattggccagtggtacgggcccaacaccgttgcccaggtgctcaag
aagctggctgtcttcgacacctggagcgccttggcagtccacatagcgatggacaacacg
gtggtgatggaggacatcagaaggttgtgcagcggcagccttccgtgtgcgggggccgcc
tcgctttccgcggattccagccggcactgtaacggcttccctgccggagctgaggtcacc
gataggccggcaccctggagacccctggtgcttctcatccccctgcgcctggggctcacg
gacatcaacgaggcctacgtggaaacactgaagcgttgcttcatgatgccgcagtccctg
ggagtgatcggcgggaagcccaacagcgcccactatttcatcggctacgctggtgaagag
ctcatctacctggacccccacacgacgcagccggcggtggagctcaccgacagctgcttc
atcgcggacgagagcttccactgccggcacccgccgagcaggatgagcattggggagctc
gacccgtccattgccgtggtgcgtccccgcccatcctgcctcctcggaccgtggggccgg
cgttcagagccggtccgtgctcagtcctgctcttctaggatggaaggccaggtgtccgct
tctaggatgtgttttcagtgtattggagggttcttctgtaagactgaggacgactttgat
gactggtgccaacaagtcagacagctgtcgctgctcggaggtgccctgcccatgttcgag
ctggtggagcagcagccttcccacctggcctgccccgacgtcctaaacgtgtccttagac
tcttctgacgtagagcgactggaaagattcttcgattcagaagatgaagactttgaaatc
ttgtctctttga
DBGET
integrated database retrieval system
