Ailuropoda melanoleuca (giant panda): 100480589
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Entry
100480589 CDS
T01329
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04120
Ubiquitin mediated proteolysis
aml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100480589 (UBE4B)
04120 Ubiquitin mediated proteolysis
100480589 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100480589 (UBE4B)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100480589 (UBE4B)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
U-box type E3
100480589 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
100480589
NCBI-ProteinID:
XP_011222549
Ensembl:
ENSAMEG00000004224
UniProt:
A0A7N5J9L3
LinkDB
All DBs
Position
11:7196068..7314383
Genome browser
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQSSQPTTPLTSPQRENPLGPPIAASAPGPSQSLGLNVHNM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
RNLMLTTGSNPGTSPMFCSVGSFGASSFSSLGASGGASTWDSYSDHFTIETCKETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNVRSQCISHTALVLQGSLTQPRSMQQPSFLV
PYMLCRNLPYGFMQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVE
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNANM
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA
TMEDVNDWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQMLTESMLEPVPELKEQIHAWMREKQNSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgccttgcacgactcgctggtgga
cagagctcccagccgaccaccccgctcacctcgccccagagggagaaccctctggggcct
cctatagcagcatcagccccaggcccctcccagagccttggtctcaatgtccacaacatg
accccagctacctccccgataggtgcatcaggagtagctcatcgaagccagagcagtgaa
ggagtcagttctctcagcagctcgccctccaatagccttgaaacccaatctcagtctctc
tcacgttcccagagcatggatatcgacggtgtctcttgtgaaaaaagcatgtcccaggtg
gatgtggattcaggaattgaaaatatggaggttgatgaaaacgatcgaagagaaaagagg
agcctcagcgataaggagccttcctcgggttctgaagtgtctgaagaacaggccttacag
ctggtctgtaagatctttcgtgtctcctggaaggaccgggacagagatgtcatctttctt
tcttctctttctgcacaatttaagcagaacccaaaagaagtgttctctgattttaaggac
ttgattggccagattttaatggaagtgctaatgatgtctactcagactagagatgaaaat
ccatttgccagtctgacggccacgtcacagccaattgccgcggcagctcggtcaccagac
agaaatctcatgctcactactggctccaacccaggaacaagccccatgttctgcagtgtg
ggttccttcggtgccagctctttctctagtttgggagcctctggtggggcaagtacttgg
gattcctacagtgaccatttcaccattgagacctgcaaggagacagacatgctgaactac
ctcatcgagtgttttgaccgagttggaatagaggaaaaaaaagcaccaaagatgtgcagc
cagccagcagtcagccagcttctgagcaacgtccgctcacagtgcatatcccataccgca
ttagtcctgcaaggttccctcacacaaccaaggtccatgcagcagccgtccttcctggtg
ccgtatatgctctgcaggaatctcccgtatggcttcatgcaggagctggtgaggaccact
caccaggatgaagaagtgttcaagcagatctttatccccattttacaaggcctggctctc
gctgccaaagagtgctccctcgacagtgactacttcaagtaccccctcatggctttaggt
gagctttgtgaaaccaagtttgggaagacacaccctgtgtgcaatttggtggcttctttg
ccgttgtggttgcctaaatccttaagccctggctctgggagggagctgcagagactctcc
tatttgggggctttctttagcttctcggtctttgcagaagatgatgctaaagtggttgaa
aaatatttctcagggcctgccattaccctggaaaacactcgcgtggtcagccaatcactg
cagcattacttggagctgggaaggcaagagcttttcaagattctgcatagtattctgtta
aacggtgagacccgtgaggctgctctcagttacatggcagctgtcgtcaatgccaatatg
aagaaagcacagatgcagacagatgatagattggtatctacagatggattcatgctgaat
ttcctttgggtgctgcagcagctaagtacaaagatcaagttagagacggtggatcccacg
tatatattccaccccaggtgtcggattactcttcctaatgacgagacgagagtgaacgcg
acgatggaggacgtgaacgactggctggctgaactttatggagatcagcctccattttct
gagccgaaattccctacagaatgcttttttcttaccctgcacgcccaccacctctccatt
ctgccaagctgccgtcgctacatccgcagactccgggccatccgggagctcaatagaact
gtggaagatttgaaaaataacgaaagccaatggaaagattccccactggcaacaagacac
cgtgaaatgctgaaacgctgcaaaactcagctgaagaaactggtacggtgcaaggcctgt
gctgacgctggtttacttgatgagagctttctgagaagatgtctgaatttttatggcctt
ctcatccagctgctgctccgcatcctggaccccgcctatcccgatataacactgccttta
aactcagatgtccccaaggtatttgcagcattgcctgagttttatgtagaagatgttgct
gaatttttattttttattgtacaatactctcctcaggtgctttatgagccctgtactcag
gatattgtgatgttcctcgttgtgatgttgtgtaaccagaactacatccgaaatccgtat
ttggtggccaaactggtggaagtcatgtttatgaccaaccctgctgttcagccacgaacc
cagaagttttttgaaatgattgaaaaccatcctctctccaccaaattgttggtcccttca
ctgatgaagttttatacagatgttgagcacaccggagccaccagtgaattctacgacaag
ttcaccattcgctatcacattagcaccatttttaaaagcctttggcaaaacatagctcac
catggcaccttcatggaggagttcaattcggggaagcagtttgttcgctatataaacatg
ctgataaatgacacgacgtttttgctcgatgaaagtctggagtctctgaagcgaatccac
gaagtgcaggaagaaatgaagaacaaagaacagtgggaccagctgccccgggatcagcag
caagcccgtcagtcccagctcgctcaggacgagcgcgtgtcacgctcctatcttgccctg
gcaacagaaaccgtggacatgttccatatcctcaccaagcaggtccagaagccgttcctc
agaccggaacttggaccccgattggctgcaatgctgaactttaatcttcagcaactctgt
ggccccaagtgccgtgacctgaaagttgaaaaccctgagaaatacggctttgaaccaaag
aagctgttggaccaactgacggatatttacctgcagctggactgtgcccggttcgccaaa
gccattgctgacgaccagaggtcctacagcaaagagttgtttgaggaagtgatctcgaag
atgcggaaggcagggatcaaatccaccatcgcgatcgagaagtttaagctcctcgccgag
aaggtggaggagattgtggccaagaacgcgcgcgcagaaatcgactacagcgacgccccc
gacgagttcagagaccctctgatggacaccctgatgactgaccccgtgcggctgccctcc
ggcaccatcatggaccgctccatcatcctgcggcacttgctgaactcccccacggacccc
ttcaaccgacagatgctgaccgagagcatgctggaaccagtgccagaactgaaagagcag
attcacgcctggatgagagagaagcaaaacagtgatcattaa
DBGET
integrated database retrieval system
