Ailuropoda melanoleuca (giant panda): 100482950
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Entry
100482950 CDS
T01329
Symbol
BPTF
Name
(RefSeq) LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100482950 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100482950 (BPTF)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
100482950 (BPTF)
NuRF complex (fruit fly)
100482950 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
DDT
PHD
WSD
WHIM1
PHD_5
Motif
Other DBs
NCBI-GeneID:
100482950
NCBI-ProteinID:
XP_019660868
Ensembl:
ENSAMEG00000018402
LinkDB
All DBs
Position
13:complement(31680818..31830947)
Genome browser
AA seq
2907 aa
AA seq
DB search
MVSEEEEEEEEDGDAEETQDSEDDEEDEIXEDDDDSDYPEEMEDDDDDASYCTESSFRSH
STYSSTPGRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFG
TVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNST
LYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIA
REELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAH
KVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTK
VQLAELIDCLDKDYWEAELCKILEEMREEIHRHMDITEDLTNKARGSNKSFLAAANEEIL
ESIRAKKGDIDIVKSPEEIEKDKNETENNNSKDVEKSREEFEDQSLEKDNDDKTADDDPE
QGKSEEPTEVGDKGNSVSANLGDNTTNASSEETIPSEGRSPVGCLSETHDSSNMAEKKVA
SELPQDVPEEPNKTCDSSNTSATTTSIQPNLENSNSSSELDSSQSESAKAADEPENGERE
SHTPVSIQEEIGDFKSEKSNGEISESPGAGRGASGSTRIITRLRNPDSKLSQLKSQQVAA
AAHEANKLFKEGKEVLVVNSQGEISRLSTKKEVVMKGNINNYFKLGQEGKYRVYHNQYST
NSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTITQLENNI
PSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWRESLGHTRLHR
MTSIEREEKEKVKKKEKKQEEEETMQQATWVKYTFPVKHQVWKQKGEEYRVTGYGGWSWI
SKTHVYRFVPKLPGNTNVNYRKSLEGTKNNVDENMDESDRRKSPRSPKKIKTEPDSEKGE
VKDSDAAKGADQSEMDVSKITEKDQDVQEILDSDNEKPYKEEPMEIDDDVKTEPRINCQE
GSQVDVVNVSEGFHLRTSYKKKIKSSKLDGLLERRIKQFTLEEKQRLEKMKLEGGIKGIG
KASTSSLKSLSESPVTMKAKEACQSDSLRQEQSLNASNGKSEDVIRGCSQSDSSILGIGD
PEHTSDRPYPKDQMLGDVSIQSPETNCQKQNSVGSDVDESLSEPTSQGQEPSKIKTRGSD
FLIGDSKLASADEIGTVIYRNKKPLIQEDNDTTVSPSHSPSLPSVPKSTDDRDLPSLSKA
VDFEGKLGCVSEYNSTLENSSDTMSIQDSSEEDMIVQNSNESLSEQFITQEQGIEGLEPL
KQEFVPDKSTGNYDKRPQGKVTEANGRKPSQEQKLEERSVNKCIDQVNLKSSTDKKNNEN
RESEKKGQKASTFQINGKDNKPKTYLKGECLKEVSESKVVSGDIEPKLNNINKIIPENDI
KSLTAKESAVKPFMNGDVIMEDFNEKNNLETKSCLLSSSDAEGDYQDGLETLPPTKESES
AHTTMPPLSCPKSSSTNQVEDMEVETSEVKKVTPSPITSGEESNLSNDFVDENGLPTHKD
ENVNGESKRKTVITEVTTMTSTVATESKTVIKVAKGDKQTVVSSTENCAKSTVTTTTTTV
TKLSTPSTGSSVDIISVKEQSKTVVTTTVTDSLTTSGGTLVTSMTVSKEYSTRDKVKLMK
FSRPKKTRSGTALPSYRKFITKSSKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALD
IWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWASLRWDDMAAKAPPGGGTTRTETS
ETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPEAPKETPTPQRKGLRSSALRPKRP
ETPKQTGPVIIETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIAAST
TSPTNSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQQNKNFHQTFATWV
KQGQSNSGVVQVQQKVLGIIPSSTGTSQQTFTSFQPRTATVTIRPNTSGSGGTTTTSQVI
TGPQIRPGMTVIRTPLQQSTLGKAIIRTPVMVQPGAPQQVVTQIIRGQPVSTAISAPSAV
SSAPGQKGLTSGTSSTNLQSSTSQSPRPQQGQVKLTMAQLTQLTQGHGGNQGLTVVIQGQ
GQTTGQLQLIPQGVTILPGPGQQLMQAAMPNGTVQRFLFTPLATAATAATTTTTTTVSTT
AAGTSEQRQSKLSPPTQVQQAKTLPPAQSSSVSPPEAQPQTAQPSAQPQPQTQAPSPAQP
EVQTQPEVQTQTTVASHVPSEAQPTPAQSSKSQVAVQCQPQSNVQGQSPARVQSPPLTRI
RPSTPSQVSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSPTQTLSSGQTLS
QVTVSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQGGVPQQIKLQL
PIQIQQSSPVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQQQIEIKREHTLQASN
QSEIIQKQVVMKHNAVIEHLKQKKTMTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAK
KRKREESVEQKRSKQNATKLSALLFKHKEQLKAEILKKRALLDKDLQIEVQEELKRDLKI
KKEKDMVQATAVAATSPAAPPAPPAPPPSPPPPPPPQHTGPLSTATATATLPAASQKRKR
EEERDSSSKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGI
LQSEAELIDEYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPN
DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEV
LESFFVQKLKGFKASRSHNNKLQSTAS
NT seq
8724 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgaggaggaggaggaggaggaggaggacggcgacgccgaagagacccaagat
tccgaggacgacgaggaggatgagatannggaggacgacgatgattccgattatccggag
gagatggaagacgacgacgacgacgccagttactgcacggaaagcagcttcaggagccat
agcacctatagcagcactccaggtaggcgaaaaccaagagtacaccggcctcgttctccg
atattggaagaaaaagacatcccaccccttgaatttcccaagtcctctgaggatttaatg
gtgcctaatgagcatataatgaatgttattgccatttatgaggtactgcggaactttggc
actgttttaaggttatctccttttcgctttgaggacttttgtgcagctctggtgagtcaa
gagcagtgcacacttatggcggaaatgcatgttgtgcttttgaaagcagttctgcgtgaa
gaagacacttccaatactacctttggacctgctgatctgaaagatagcgttaattccacg
ctgtatttcatagacgggatgacgtggccggaggtgctgcgggtgtactgtgagagtgat
aaggagtaccatcacgttcttccttaccaagaagcagaggactatccgtatggaccagta
gagaacaaaatcaaagttctgcagttcttagttgatcagtttcttaccacaaatattgct
cgtgaggagttgatgtctgaaggggtgatccaatatgacgaccattgtcgggtttgtcac
aaacttggggatttgctttgctgcgaaacatgttcagcagtataccatttggaatgtgtg
aaaccacctcttgaggaggtaccagaggatgaatggcagtgtgaagtctgtgtagcacat
aaggtgcctggtgtgactgactgtgttgctgaaatccaaaaaaacaaaccatatattcga
catgaacctattggatatgacaggagtcggaggaaatactggttcttaaaccgaagactc
ataatagaagaagatacagaaaatgaaaatgagaagaaaatttggtactacagcacaaag
gtccaacttgcagaattaattgactgtctagataaagattactgggaagcagaactctgc
aaaattctggaagaaatgcgtgaagaaatccaccggcacatggacataactgaagacctg
accaataaggctcggggcagtaacaaatcctttctggcggcagctaatgaagaaattttg
gaatccataagagccaaaaaaggagacattgatattgttaaaagcccagaagaaatagaa
aaggacaagaatgagactgagaataataactccaaagatgttgagaaaagcagagaggag
tttgaagaccagtcccttgaaaaagacaatgacgacaaaacagcggatgatgatcctgag
caaggaaaatctgaggagccaacagaagttggggataaaggtaactctgtgtcagcaaat
cttggcgacaacacaacaaatgcttcttccgaagagactattccctctgaagggaggagt
cccgtggggtgtctctcagaaacccacgatagcagcaacatggcagagaagaaggtggca
tctgagctcccccaggatgtgccagaagaacctaacaagacatgtgacagcagtaacact
agtgctaccactacctccatccagcctaatctggaaaacagtaacagcagcagtgaacta
gattcttcccagagtgaatctgctaaggcagctgatgagcctgaaaatggagaaagagag
tctcatacacctgtctctattcaagaagagataggtgatttcaaatcagagaagtctaat
ggggaaataagtgagtctcctggagcaggaagaggggcatctgggtcaactcgaattatc
accagattacggaatccagacagcaaacttagccagctgaagagccaacaggtggcagct
gcagcccatgaagcaaataaattatttaaggagggcaaagaggtactggtagttaactct
caaggagaaatttcacggttgagcaccaaaaaggaagtggtcatgaaaggaaatatcaac
aattattttaagttgggtcaagaagggaagtatcgtgtctaccacaatcagtactccacc
aattcatttgctttgaataagcaccagcacagagaagatcatgataagagaagacatctt
gcacataaattctgtctgactccagcaggagagttcaaatggaatggttctgtccatggg
tccaaagttcttaccatatctactctaagattgactatcacccaactagaaaacaatatc
ccttcatcctttcttcatccaaattgggcttcacacagggcaaattggatcaaagcagtt
cagatgtgtagcaaacccagagaatttgccctggctttagcgattttggagtgtgcagtc
aaacctgttgtgatgctaccaatatggcgagaatctttaggccacaccaggttacacagg
atgacatcaattgaaagagaagaaaaggagaaagtcaagaaaaaagagaaaaaacaagaa
gaggaagaaacgatgcaacaagctacatgggtaaaatatacatttccagttaaacatcag
gtttggaaacaaaaaggagaggaatacagagtaacaggatatggtggctggagctggatt
agtaaaactcatgtttataggtttgttcctaaattgccgggcaatactaatgtgaattac
agaaagtcgttagaaggaaccaaaaataatgtggatgaaaatatggatgagtcagataga
agaaaaagtccacggagtccaaaaaaaataaaaacagagccggattctgagaaaggcgag
gtaaaagattcagatgctgccaaaggagcagaccaaagtgaaatggacgtttccaagatt
actgagaaggaccaagatgtacaagaaattttagattctgacaatgagaaaccctataag
gaagaaccaatggagatagatgatgatgtgaaaacagagccacgtataaactgtcaggaa
ggttctcaagtagatgtggtcaatgtcagtgagggcttccatctaaggactagttataaa
aagaaaattaaatcatctaaactagatggacttcttgaaaggagaattaaacagtttaca
ctggaggaaaaacagcgtctcgagaaaatgaagttggagggtggaattaagggtatagga
aaggcctctacaagttctttgaaaagcctttctgagtcaccagtaaccatgaaagcaaaa
gaagcgtgtcaaagtgactcacttagacaagaacaaagccttaatgcaagtaatggtaaa
tctgaagatgtgattcggggatgttcccaaagcgattcttcaattcttggaattggtgat
cctgagcatacatcagacagaccttatccaaaagatcaaatgttaggtgacgtctccatt
cagagcccagagacaaactgtcagaaacaaaattctgttggaagtgacgtagatgagagt
ctctctgaacctaccagtcaaggccaggaacctagtaagattaaaacaagaggaagtgac
tttctcattggtgactccaaactagccagtgcagatgaaattggtactgtgatctatagg
aacaaaaaaccactcatacaggaggataatgacaccactgtttctccttcccatagccct
tcacttccatcagtacctaaaagtactgatgatagagatctcccgtctctgtcaaaagca
gtggactttgaaggaaaactaggatgtgtctctgaatataacagcactttggaaaatagt
tctgatactatgtctattcaggacagcagtgaagaagatatgattgttcagaatagcaat
gaaagtctctctgagcagttcataactcaggaacaaggtattgaaggcttggaaccattg
aaacaggagtttgttccagataagtccactggaaactatgataaaagaccacagggtaag
gtaactgaagcaaatggtagaaagccaagtcaagaacagaaattagaggagagatcagtt
aataagtgtattgatcaagtcaatctaaaaagtagcactgacaaaaagaataatgaaaat
cgagagtctgaaaagaaaggacagaaagcaagtacctttcaaatcaatggaaaagataat
aaacccaaaacatatttaaaaggggaatgcttgaaagaagtctcagagagcaaagtagta
agtggtgacattgaaccaaagcttaataatataaataaaataattcctgaaaatgatatt
aagtctttgactgctaaagaatctgctgtaaagccatttatgaacggtgatgtcatcatg
gaagattttaatgaaaaaaacaacttggaaacaaaatcatgtttactgagctcttcagat
gctgaaggcgactaccaagatggcctagagaccctgccaccaaccaaagagtctgagagt
gcacacactaccatgcctccactgtcttgtccaaaaagcagttccacaaatcaggtagaa
gatatggaagttgaaacctcagaagttaagaaagttactccctcacctattacttctgga
gaggaatctaacctcagtaatgattttgttgatgaaaatggtctgcccacccacaaagat
gaaaatgtcaacggagagtccaagagaaaaacagtcatcacagaagtcaccactatgaca
tccacagtggccacagaatcaaaaaccgtaatcaaagtagccaaaggtgataagcagact
gtggtctcttccacagaaaattgtgccaaatccactgtcacaaccaccactacaacagta
acaaagctttccacaccctccacaggcagcagtgtggacatcatctctgtgaaggagcag
agcaaaactgtggtcaccacaacagtgacagactcactgaccacttcagggggcactctg
gtgacatctatgaccgtgagcaaagaatattccacaagagacaaagtgaaactcatgaaa
ttctcaagacccaagaagactcgttcaggtacagctctgccatcctataggaagttcatc
accaagagcagcaagaagagcatatttgttttgcctaatgatgacttaaaaaagttggcc
agaaaaggaggaatccgagaagtcccttattttaattacaatgcaaaacctgccttggat
atatggccatatccttctcctagaccaacctttggtatcacttggaggtatagacttcag
actgtaaagtccttagctggagtgagccttatgttacggttactgtgggcaagcctgaga
tgggatgacatggcagccaaggcccctccaggaggagggactacgcggacagaaacatct
gaaactgaaatcacaacaacagagataattaaaaggcgagatgttggtccttatggcatt
cgatctgaatattgtatccggaaaatcatttgccccattggagttccagaagcaccaaaa
gaaacacctacacctcagaggaaaggccttcgatcaagtgcattgcggccaaagagacca
gaaacgcccaagcagactggccctgtgattatcgaaacttgggtagcagaggaagagttg
gaattatgggagatcagggcgttcgctgaaagagtggagaaagaaaaggcacaagcagtt
gagcaacaggctaagaaacgattggaacagcagaagcctacagtaattgcagcttccacc
acttccccaacaaacagtacaactagtaccatttctccagcacaaaaagttatggtggcc
cccataagtggctcagttacaactggaactaaaatggtactcactactaaagttggatct
ccagctacagtaacattccagcaaaacaagaacttccatcagacctttgctacgtgggtt
aagcaaggccagtcaaattcaggcgttgttcaagtacagcagaaagttctgggtatcatt
ccatcaagtacaggtacaagtcagcagacctttacttcattccagcccaggacagcaaca
gtcacaattaggcccaatacctcaggctctggaggaaccacaaccacttcacaagtaatc
acagggcctcagatccgccctggtatgacggtgattagaacaccactccagcagtcaaca
ctaggaaaggcaattattcgaacacctgtgatggtacagccaggtgcccctcagcaagtg
gtgactcagatcatcagagggcagcccgtctccaccgccatctccgcccctagtgctgtt
tcctcagcacctgggcagaagggattaacttcaggaacatccagcacaaatctgcagtct
tcaacctcacagtcccctcgcccccagcagggacaggtgaagcttaccatggctcagctc
actcagttaacacagggccacggtggcaatcaaggtttgacggtagtgattcaaggacaa
ggtcaaacgactggacagttgcagttgatacctcaaggggtgactatacttccgggccca
ggacagcagctgatgcaagctgccatgccaaatggcactgttcagcggttcctcttcacg
cctttggcaacagcagccacagcagccaccaccaccaccaccaccaccgtttccactaca
gcagcaggtacaagtgaacaaagacagagtaaattatcacccccaacacaggtgcaacaa
gccaaaaccttgccaccagctcagtcatcaagtgtgagtcctccagaagcccagccacag
actgctcagccttcagctcagccccagccccaaacccaggccccatccccagctcagcct
gaagttcagactcagcctgaagttcagacccaaacaactgtcgcatcccatgtcccttct
gaagcacaacccaccccagcacagtcatccaaatcccaagtcgcagtgcagtgtcagcct
caaagtaatgtccaaggacagtctcctgctcgcgtccaaagtccaccactgactcgaata
cgtccatcgactccatcccaagtgtctcctggacagcaatcccaggttcagactacaacc
tcacaaccgattccaattcagccacatacatctcttcagataccttcccagggccagcca
caatcacaaccccaggtacagtctccaactcaaactctttcatcaggacagacgttaagt
caagttactgtttcatccccatcccgtcctcagctacagatacagcagccgcagccccaa
gtcattgctgtgcctcagctgcaacaacaagtccaggttctctcgcagatccagtcgcag
gttgtggctcagatacaggctcagcaaggtggtgtgccccagcaaatcaaactccagtta
cctattcaaatccagcaaagcagtcctgtgcagactcaccagattcagaatgtggttaca
gtgcaggcagccagtgtgcaagagcagttgcaaagggttcagcaactcagggatcagcag
caaaagaagaagcagcaacagatagaaattaagcgggaacacactctccaagcttctaat
caaagtgaaatcattcagaaacaggtggtgatgaagcataatgctgtaatagaacattta
aagcagaaaaagaccatgactccagctgaaagagaagagaatcaaagaatgattgtctgt
aaccaggtgatgaagtatattttggataagatagataaagaagaaaaacaggcagcaaaa
aaacggaagcgtgaagagagcgtggaacagaaacgtagcaagcagaatgccaccaagctc
tccgcactgctcttcaaacacaaagaacaactcaaagctgagatattaaaaaagagagcg
ctcctggacaaagacctacagattgaagtgcaggaagagctcaagagagacttgaaaatt
aagaaagaaaaagacatggtgcaggccacagcagtggcggccacctcacctgcagcaccg
cctgcgcctccggcccctccgccttcacccccgcctccgcctcctccgcagcacacaggc
cccctgtccacggccacagccacggccactctgcctgcggcttcccagaagaggaagcga
gaagaagaaagagactcaagctccaagtccaagaagaagaaaatgatctctactacctca
aaggaaactaagaaggacacaaagctttactgtatctgtaaaacgccttacgatgaatct
aaattttatattggctgtgatcggtgtcagaattggtaccatgggcgctgcgttggcatc
ttgcaaagtgaggcagagctcattgacgagtatgtctgtccacagtgccagtcaacagag
gatgccatgacagtgctcacgccgctcacggagaaagattatgagggtttaaaaagggtg
cttcgttctttacaggcccataagatggcctggcctttccttgaaccagtggaccctaat
gatgcaccagattattacggtgtcattaaggagcctatggaccttgccaccatggaagaa
agagtacaaagacgatattatgaaaagctgacggaatttgtggcagatatgaccaaaatt
tttgataactgtcgctactacaatccgagtgactcgcctttttaccagtgtgcggaagtt
ctcgagtccttctttgtacagaaattgaaagggttcaaggctagcaggtctcataacaac
aagctgcagtctacagcttcttaa
DBGET
integrated database retrieval system
