Ailuropoda melanoleuca (giant panda): 100483216 Help Entry 100483216         CDS       T01329                                  Gene name TRAF6 Definition (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism aml  Ailuropoda melanoleuca (giant panda) Pathway aml04010   MAPK signaling pathway aml04064   NF-kappa B signaling pathway aml04120   Ubiquitin mediated proteolysis aml04140   Autophagy - animal aml04144   Endocytosis aml04380   Osteoclast differentiation aml04620   Toll-like receptor signaling pathway aml04621   NOD-like receptor signaling pathway aml04622   RIG-I-like receptor signaling pathway aml04657   IL-17 signaling pathway aml04722   Neurotrophin signaling pathway aml05132   Salmonella infection aml05133   Pertussis aml05135   Yersinia infection aml05140   Leishmaniasis aml05142   Chagas disease aml05145   Toxoplasmosis aml05152   Tuberculosis aml05160   Hepatitis C aml05161   Hepatitis B aml05162   Measles aml05168   Herpes simplex virus 1 infection aml05169   Epstein-Barr virus infection aml05170   Human immunodeficiency virus 1 infection aml05171   Coronavirus disease - COVID-19 aml05200   Pathways in cancer aml05222   Small cell lung cancer aml05235   PD-L1 expression and PD-1 checkpoint pathway in cancer Brite KEGG Orthology (KO) [BR:aml00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100483216 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100483216 (TRAF6)    04064 NF-kappa B signaling pathway     100483216 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100483216 (TRAF6)    04140 Autophagy - animal     100483216 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100483216 (TRAF6)    04621 NOD-like receptor signaling pathway     100483216 (TRAF6)    04622 RIG-I-like receptor signaling pathway     100483216 (TRAF6)    04657 IL-17 signaling pathway     100483216 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     100483216 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     100483216 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100483216 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     100483216 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     100483216 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100483216 (TRAF6)    05135 Yersinia infection     100483216 (TRAF6)    05133 Pertussis     100483216 (TRAF6)    05152 Tuberculosis     100483216 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100483216 (TRAF6)    05161 Hepatitis B     100483216 (TRAF6)    05160 Hepatitis C     100483216 (TRAF6)    05171 Coronavirus disease - COVID-19     100483216 (TRAF6)    05162 Measles     100483216 (TRAF6)    05168 Herpes simplex virus 1 infection     100483216 (TRAF6)    05169 Epstein-Barr virus infection     100483216 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100483216 (TRAF6)    05140 Leishmaniasis     100483216 (TRAF6)    05142 Chagas disease     100483216 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aml04131]     100483216 (TRAF6)    04121 Ubiquitin system [BR:aml04121]     100483216 (TRAF6) Enzymes [BR:aml01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100483216 (TRAF6) Membrane trafficking [BR:aml04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100483216 (TRAF6) Ubiquitin system [BR:aml04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100483216 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Tropomyosin_1 SlyX Spc29 U-box DUF16 DUF4455 PspA_IM30 Med21 DUF3450 EzrA UPF0242 Laminin_II CENP-F_leu_zip DUF1664 Motif Other DBs NCBI-GeneID:  100483216 NCBI-ProteinID:  XP_002926543 Ensembl:  ENSAMEG00000013844 UniProt:  G1M5H7 LinkDB All DBs Position 16 AA seq 541 aa AA seqDB search MSLLNCENSCGSSQSESDCCAAMASSCSAAAKDDSVSGTASTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMNCLQCQRPFQKCQLNIHIHK ECPRRQVSCMNCAALMAFEDKEVHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALAPVPQRDMPPYDSSSV SRVSTPCHPEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKV AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ RCANYISLFVHTMQGEYDSHLPWPFQGTIRLAILDQSEAPVRQNHEEIMDAKPELLAFQR PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSG T NT seq 1626 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaagtgactgctgt gccgccatggccagctcctgtagcgctgcagctaaagatgacagtgtgagtggaaccgcc agcacggggaacctctccagctcttttatggaagagatccaggggtatgatgtggagttt gacccacctctagaaagcaagtatgaatgccccatctgcctgatggcattacgggaagca gtacaaacaccatgtggccacaggttctgcaaagcttgcatcatcaaatcaataagggat gctggtcacaaatgtccagttgacaatgaaatattgctggaaaatcaactatttcctgac aattttgcaaaacgagagattctttctctgatggtgaagtgtccaaatgaaggttgtttg cacaagatggaactgaggcatcttgaggatcaccaagcacattgtgaatttgctctcatg aattgtctccagtgccaacgtcccttccaaaaatgccaacttaatattcacattcataag gagtgcccgaggagacaagtttcttgcatgaactgtgctgcgttgatggcatttgaagat aaagaggtgcatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatacc atgctcatcagagaacagatgcctaatcactatgatctagactgtccaacagccccaatt ccatgcacattcagtactttcggctgccatgtaaagatgcagcggaatcacttggcacgc cacctacaagagaatacgcagtcgcacatgagaatgttggctcaggctgttcagagttta agtcttgctttagctcctgtacctcagcgtgatatgccgccgtatgattcttcctccgtg tcccgggtctctactccgtgtcacccagaggtccataatttccaagaaaccattcagcag ttagagggtcgcctcgtaagacaagaccatcaaatccgagagctcactgctaaaatggaa actcagagcatgtacgtgagtgagctcaagcgaactatccgaacccttgaagacaaagtt gctgaaatagaagcgcagcagtgcaacggcatctacatctggaagatcggcaactttggg atgcatttgaaatctcaggaggaggagaaacctgttgtcattcacagccctggattctac acaggcaaacccgggtacaaactgtgcatgcgcctgcacctgcagttaccaactgctcag cgctgcgctaattatatatccctctttgtccacaccatgcaaggagagtatgacagccac ctcccttggcccttccagggtacaatacgccttgcaattcttgatcagtctgaggcacct gtaaggcaaaaccatgaagagatcatggatgccaaaccagagctgcttgccttccagaga cccacaatcccacggaacccaaaaggttttggctatgtgacttttatgcatctggaagcc ctaagacaaagaaccttcattaaggatgatactttactagtacgctgtgaggtctctacc cgcttcgacatgggcagtctccggagggagggttttcagccacgaagtactgattcgggg acatag

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