KEGG   Ailuropoda melanoleuca (giant panda): 100484301
Entry
100484301         CDS       T01329                                 
Symbol
SLC1A6
Name
(RefSeq) LOW QUALITY PROTEIN: excitatory amino acid transporter 4
  KO
K05617  solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04721  Synaptic vesicle cycle
aml04724  Glutamatergic synapse
aml05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    100484301 (SLC1A6)
   04721 Synaptic vesicle cycle
    100484301 (SLC1A6)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    100484301 (SLC1A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:aml02000]
    100484301 (SLC1A6)
Transporters [BR:aml02000]
 Solute carrier family (SLC)
  SLC1: High-affinity glutamate and neutral amino acid transporter
   100484301 (SLC1A6)
SSDB
Motif
Pfam: SDF DUF6223
Other DBs
NCBI-GeneID: 100484301
NCBI-ProteinID: XP_034513819
Ensembl: ENSAMEG00000002521
LinkDB
Position
4:complement(10966506..10983960)
AA seq 521 aa
MTREHVLRFLRRNAFILLTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQML
VLPLIVSSLVTGMASLDNKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGL
HREGRIETIPTADAFMDLVRNMFPPNLVEACFKQFKTQYSTRLVTRTIVRTENGSELGTS
MPSPSSMDNGTSLLENVTWALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIG
GMKHKGRVLRDFFDSLNEAIMRMVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYT
LTVIVGLCLHAGGVLPLIYFLITHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEE
GLGVDRRITRFVLPVGATVNXDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASV
GAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLS
QRELELQEAELTLPSLGKPYKSLMAQEKGASRGRGGNESAM
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgacgcgggagcacgtgctgcgcttcctgcgccggaacgccttcatcctgctgaccgtc
agcgctgtggtcatcggggtcagcctggcctttgccctgcgcccgtaccagctcacctac
cgccagatcaagtacttctctttccctggagagcttctcatgaggatgctgcaaatgctg
gtgctgccacttattgtctccagcctggtcacaggtatggcatccctggataacaaggca
acagggcggatggggatgcgggcagctgtgtactacatggtgaccacggtcatcgctgtc
ttcattggcatcctcatggtcaccatcatccatcctgggaagggctccaaggaggggctg
caccgcgagggccgcattgagaccatccccacagccgatgccttcatggacctggtcaga
aatatgtttccgcccaacctggtggaggcctgcttcaaacagttcaagacgcagtatagc
acgaggttggtaaccaggaccatcgtgaggacagagaatggatctgagctgggcacctcc
atgccttccccatcctcaatggacaacggaactagcctcctggaaaatgtcacctgggcc
ttgggcaccctgcaggaggtgctgagcttcgaggagactgtgcctgtgcctggctcagcc
aatggcatcaatgccctgggccttgtggtcttctctgtggcctttgggctggtcatcggt
ggcatgaaacacaagggccgagtcctgcgggatttcttcgacagcctcaatgaggctatt
atgaggatggtgggcatcattatctggtacgcacctgtgggcatcctgttcctgattgct
gggaagatcctagagatggaggacatggccgtcctggggggtcagctgggcatgtacacc
ctgaccgtcattgtgggcttgtgcctccatgctggtggtgtcctgcctctcatctacttc
ctcatcacccaccggaacccctttcccttcatcgggggcatgctgcaggccctcatcact
gccatgggcacgtcttccagctctgcaacactgcccatcactttccgctgcctggaggag
ggccttggtgtggaccgacgcatcaccaggttcgtgctgcccgtgggggccaccgtcaat
nnggatgggaccgccctgtatgaggccctggccgccatcttcatcgcccaagtcaacaac
tatgagctcaacctgggccagatcacgaccatcagtatcacggcgacagcagccagtgtt
ggggctgctggcatcccccaggcgggtctggtcaccatggtcattgtgctcacatcggtc
ggcctgcccactgaagacatcacgctgatcatagctgtggactggttccttgaccgactt
cgcacaatgactaatgtcctgggggactctatcggagcagccgtcattgagcatttgtct
cagcgggagctggagctgcaggaagccgagctcaccctccccagcctggggaagccctac
aagtcactcatggcacaagagaagggggcgtctaggggacggggaggcaacgagagtgcc
atgtga

DBGET integrated database retrieval system