Ailuropoda melanoleuca (giant panda): 100484301
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Entry
100484301 CDS
T01329
Symbol
SLC1A6
Name
(RefSeq) LOW QUALITY PROTEIN: excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04721
Synaptic vesicle cycle
aml04724
Glutamatergic synapse
aml05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100484301 (SLC1A6)
04721 Synaptic vesicle cycle
100484301 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100484301 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aml02000
]
100484301 (SLC1A6)
Transporters [BR:
aml02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
100484301 (SLC1A6)
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Gene cluster
GFIT
Motif
Pfam:
SDF
DUF6223
Motif
Other DBs
NCBI-GeneID:
100484301
NCBI-ProteinID:
XP_034513819
Ensembl:
ENSAMEG00000002521
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All DBs
Position
4:complement(10966506..10983960)
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AA seq
521 aa
AA seq
DB search
MTREHVLRFLRRNAFILLTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQML
VLPLIVSSLVTGMASLDNKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGL
HREGRIETIPTADAFMDLVRNMFPPNLVEACFKQFKTQYSTRLVTRTIVRTENGSELGTS
MPSPSSMDNGTSLLENVTWALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIG
GMKHKGRVLRDFFDSLNEAIMRMVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYT
LTVIVGLCLHAGGVLPLIYFLITHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEE
GLGVDRRITRFVLPVGATVNXDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASV
GAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLS
QRELELQEAELTLPSLGKPYKSLMAQEKGASRGRGGNESAM
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggagcacgtgctgcgcttcctgcgccggaacgccttcatcctgctgaccgtc
agcgctgtggtcatcggggtcagcctggcctttgccctgcgcccgtaccagctcacctac
cgccagatcaagtacttctctttccctggagagcttctcatgaggatgctgcaaatgctg
gtgctgccacttattgtctccagcctggtcacaggtatggcatccctggataacaaggca
acagggcggatggggatgcgggcagctgtgtactacatggtgaccacggtcatcgctgtc
ttcattggcatcctcatggtcaccatcatccatcctgggaagggctccaaggaggggctg
caccgcgagggccgcattgagaccatccccacagccgatgccttcatggacctggtcaga
aatatgtttccgcccaacctggtggaggcctgcttcaaacagttcaagacgcagtatagc
acgaggttggtaaccaggaccatcgtgaggacagagaatggatctgagctgggcacctcc
atgccttccccatcctcaatggacaacggaactagcctcctggaaaatgtcacctgggcc
ttgggcaccctgcaggaggtgctgagcttcgaggagactgtgcctgtgcctggctcagcc
aatggcatcaatgccctgggccttgtggtcttctctgtggcctttgggctggtcatcggt
ggcatgaaacacaagggccgagtcctgcgggatttcttcgacagcctcaatgaggctatt
atgaggatggtgggcatcattatctggtacgcacctgtgggcatcctgttcctgattgct
gggaagatcctagagatggaggacatggccgtcctggggggtcagctgggcatgtacacc
ctgaccgtcattgtgggcttgtgcctccatgctggtggtgtcctgcctctcatctacttc
ctcatcacccaccggaacccctttcccttcatcgggggcatgctgcaggccctcatcact
gccatgggcacgtcttccagctctgcaacactgcccatcactttccgctgcctggaggag
ggccttggtgtggaccgacgcatcaccaggttcgtgctgcccgtgggggccaccgtcaat
nnggatgggaccgccctgtatgaggccctggccgccatcttcatcgcccaagtcaacaac
tatgagctcaacctgggccagatcacgaccatcagtatcacggcgacagcagccagtgtt
ggggctgctggcatcccccaggcgggtctggtcaccatggtcattgtgctcacatcggtc
ggcctgcccactgaagacatcacgctgatcatagctgtggactggttccttgaccgactt
cgcacaatgactaatgtcctgggggactctatcggagcagccgtcattgagcatttgtct
cagcgggagctggagctgcaggaagccgagctcaccctccccagcctggggaagccctac
aagtcactcatggcacaagagaagggggcgtctaggggacggggaggcaacgagagtgcc
atgtga
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